data_148L # _model_server_result.job_id 0HVL8DQKV2CJVAspcfSIUw _model_server_result.datetime_utc '2025-02-05 12:46:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 148l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":174}' # _entry.id 148L # _exptl.entry_id 148L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 148L _cell.length_a 50.9 _cell.length_b 67.3 _cell.length_c 49.6 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 148L _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 3 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 MUB _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 3 n C MUB 1 A 1 MUB S 165 MUB 3 n C NAG 2 A 2 NAG S 164 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A OE2 GLU 26 E GLU 26 1_555 C C1 MUB . A MUB 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.509 ? covale ? covale2 B C ALA 1 S ALA 166 1_555 B N FGA 2 S FGA 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale3 B N ALA 1 S ALA 166 1_555 C C10 MUB . A MUB 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.351 ? covale ? covale4 B CD FGA 2 S FGA 167 1_555 B N API 3 S API 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.3 ? covale ? covale5 B C API 3 S API 169 1_555 B N DAL 4 S DAL 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? covale ? covale6 C O4 MUB . A MUB 1 1_555 C C1 NAG . A NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.394 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BME sing 96 n n C1 O1 BME sing 97 n n C1 H11 BME sing 98 n n C1 H12 BME sing 99 n n C2 S2 BME sing 100 n n C2 H21 BME sing 101 n n C2 H22 BME sing 102 n n O1 HO1 BME sing 103 n n S2 HS2 BME sing 104 n n # _atom_sites.entry_id 148L _atom_sites.fract_transf_matrix[1][1] 0.019646 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014859 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020161 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 BME E 1 174 174 BME BME . E 5 HOH E 1 175 175 HOH HOH . E 5 HOH E 2 176 176 HOH HOH . E 5 HOH E 3 177 177 HOH HOH . E 5 HOH E 4 178 178 HOH HOH . E 5 HOH E 5 179 179 HOH HOH . E 5 HOH E 6 180 180 HOH HOH . E 5 HOH E 7 181 181 HOH HOH . E 5 HOH E 8 183 183 HOH HOH . E 5 HOH E 9 184 184 HOH HOH . E 5 HOH E 10 185 185 HOH HOH . E 5 HOH E 11 186 186 HOH HOH . E 5 HOH E 12 187 187 HOH HOH . E 5 HOH E 13 188 188 HOH HOH . E 5 HOH E 14 189 189 HOH HOH . E 5 HOH E 15 191 191 HOH HOH . E 5 HOH E 16 192 192 HOH HOH . E 5 HOH E 17 193 193 HOH HOH . E 5 HOH E 18 194 194 HOH HOH . E 5 HOH E 19 195 195 HOH HOH . E 5 HOH E 20 196 196 HOH HOH . E 5 HOH E 21 197 197 HOH HOH . E 5 HOH E 22 200 200 HOH HOH . E 5 HOH E 23 202 202 HOH HOH . E 5 HOH E 24 203 203 HOH HOH . E 5 HOH E 25 204 204 HOH HOH . E 5 HOH E 26 206 206 HOH HOH . E 5 HOH E 27 208 208 HOH HOH . E 5 HOH E 28 209 209 HOH HOH . E 5 HOH E 29 211 211 HOH HOH . E 5 HOH E 30 213 213 HOH HOH . E 5 HOH E 31 214 214 HOH HOH . E 5 HOH E 32 215 215 HOH HOH . E 5 HOH E 33 217 217 HOH HOH . E 5 HOH E 34 223 223 HOH HOH . E 5 HOH E 35 226 226 HOH HOH . E 5 HOH E 36 229 229 HOH HOH . E 5 HOH E 37 235 235 HOH HOH . E 5 HOH E 38 236 236 HOH HOH . E 5 HOH E 39 238 238 HOH HOH . E 5 HOH E 40 240 240 HOH HOH . E 5 HOH E 41 242 242 HOH HOH . E 5 HOH E 42 244 244 HOH HOH . E 5 HOH E 43 245 245 HOH HOH . E 5 HOH E 44 247 247 HOH HOH . E 5 HOH E 45 249 249 HOH HOH . E 5 HOH E 46 250 250 HOH HOH . E 5 HOH E 47 251 251 HOH HOH . E 5 HOH E 48 253 253 HOH HOH . E 5 HOH E 49 254 254 HOH HOH . E 5 HOH E 50 256 256 HOH HOH . E 5 HOH E 51 258 258 HOH HOH . E 5 HOH E 52 263 263 HOH HOH . E 5 HOH E 53 265 265 HOH HOH . E 5 HOH E 54 268 268 HOH HOH . E 5 HOH E 55 273 273 HOH HOH . E 5 HOH E 56 274 274 HOH HOH . E 5 HOH E 57 275 275 HOH HOH . E 5 HOH E 58 276 276 HOH HOH . E 5 HOH E 59 280 280 HOH HOH . E 5 HOH E 60 283 283 HOH HOH . E 5 HOH E 61 285 285 HOH HOH . E 5 HOH E 62 289 289 HOH HOH . E 5 HOH E 63 290 290 HOH HOH . E 5 HOH E 64 293 293 HOH HOH . E 5 HOH E 65 299 299 HOH HOH . E 5 HOH E 66 300 300 HOH HOH . E 5 HOH E 67 301 301 HOH HOH . E 5 HOH E 68 302 302 HOH HOH . E 5 HOH E 69 303 303 HOH HOH . E 5 HOH E 70 304 304 HOH HOH . E 5 HOH E 71 311 311 HOH HOH . E 5 HOH E 72 316 316 HOH HOH . E 5 HOH E 73 317 317 HOH HOH . E 5 HOH E 74 320 320 HOH HOH . E 5 HOH E 75 321 321 HOH HOH . E 5 HOH E 76 326 326 HOH HOH . E 5 HOH E 77 329 329 HOH HOH . E 5 HOH E 78 330 330 HOH HOH . E 5 HOH E 79 332 332 HOH HOH . E 5 HOH E 80 333 333 HOH HOH . E 5 HOH E 81 334 334 HOH HOH . E 5 HOH E 82 376 376 HOH HOH . E 5 HOH E 83 377 377 HOH HOH . E 5 HOH E 84 378 378 HOH HOH . E 5 HOH E 85 379 379 HOH HOH . E 5 HOH E 86 381 381 HOH HOH . E 5 HOH E 87 391 391 HOH HOH . E 5 HOH E 88 394 394 HOH HOH . E 5 HOH E 89 397 397 HOH HOH . E 5 HOH E 90 398 398 HOH HOH . E 5 HOH E 91 403 403 HOH HOH . E 5 HOH E 92 407 407 HOH HOH . E 5 HOH E 93 434 434 HOH HOH . E 5 HOH E 94 435 435 HOH HOH . E 5 HOH E 95 436 436 HOH HOH . E 5 HOH E 96 441 441 HOH HOH . E 5 HOH E 97 442 442 HOH HOH . E 5 HOH E 98 443 443 HOH HOH . E 5 HOH E 99 444 444 HOH HOH . E 5 HOH E 100 445 445 HOH HOH . E 5 HOH E 101 446 446 HOH HOH . E 5 HOH E 102 451 451 HOH HOH . E 5 HOH E 103 453 453 HOH HOH . E 5 HOH E 104 454 454 HOH HOH . E 5 HOH E 105 455 455 HOH HOH . E 5 HOH E 106 457 457 HOH HOH . E 5 HOH E 107 473 473 HOH HOH . E 5 HOH E 108 477 477 HOH HOH . E 5 HOH E 109 478 478 HOH HOH . E 5 HOH E 110 488 488 HOH HOH . E 5 HOH E 111 489 489 HOH HOH . E 5 HOH E 112 490 490 HOH HOH . E 5 HOH E 113 491 491 HOH HOH . E 5 HOH E 114 493 493 HOH HOH . E 5 HOH E 115 495 495 HOH HOH . E 5 HOH E 116 497 497 HOH HOH . E 5 HOH E 117 512 512 HOH HOH . E 5 HOH E 118 513 513 HOH HOH . E 5 HOH E 119 514 514 HOH HOH . E 5 HOH E 120 515 515 HOH HOH . E 5 HOH E 121 517 517 HOH HOH . E 5 HOH E 122 532 532 HOH HOH . E 5 HOH E 123 533 533 HOH HOH . E 5 HOH E 124 534 534 HOH HOH . E 5 HOH E 125 537 537 HOH HOH . E 5 HOH E 126 538 538 HOH HOH . E 5 HOH E 127 542 542 HOH HOH . F 5 HOH S 1 182 182 HOH HOH . F 5 HOH S 2 190 190 HOH HOH . F 5 HOH S 3 207 207 HOH HOH . F 5 HOH S 4 212 212 HOH HOH . F 5 HOH S 5 225 225 HOH HOH . F 5 HOH S 6 239 239 HOH HOH . F 5 HOH S 7 270 270 HOH HOH . F 5 HOH S 8 281 281 HOH HOH . F 5 HOH S 9 306 306 HOH HOH . F 5 HOH S 10 324 324 HOH HOH . F 5 HOH S 11 456 456 HOH HOH . F 5 HOH S 12 496 496 HOH HOH . F 5 HOH S 13 498 498 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . D 4 2.094 33.449 31.071 1 26.58 ? C1 BME 174 E 1 HETATM 2 C C2 BME . . . D 4 0.951 32.578 31.669 1 53.32 ? C2 BME 174 E 1 HETATM 3 O O1 BME . . . D 4 3.253 32.645 30.782 1 36.57 ? O1 BME 174 E 1 HETATM 4 S S2 BME . . . D 4 0.664 32.875 33.436 1 68.58 ? S2 BME 174 E 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 39 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 345 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 4 #