data_154D # _model_server_result.job_id BAWOqexe7nkJZEWzi7H-aA _model_server_result.datetime_utc '2024-10-19 14:44:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 154d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":9}' # _entry.id 154D # _exptl.entry_id 154D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 668.87 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BIS-(N-ETHYLPYRIDINIUM-(3-METHOXYCARBAZOLE))HEXANE-1,6-DIAMINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 154D _cell.length_a 27.09 _cell.length_b 27.09 _cell.length_c 81.89 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 154D _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A O3' CBR 1 A CBR 1 1_555 A P DG 2 A DG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.606 ? covale ? covale2 B O3' CBR 1 B CBR 5 1_555 B P DG 2 B DG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.597 ? hydrog WATSON-CRICK hydrog1 A N3 CBR 1 A CBR 1 1_555 B N1 DG 4 B DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N4 CBR 1 A CBR 1 1_555 B O6 DG 4 B DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O2 CBR 1 A CBR 1 1_555 B N2 DG 4 B DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N1 DG 2 A DG 2 1_555 B N3 DC 3 B DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N2 DG 2 A DG 2 1_555 B O2 DC 3 B DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O6 DG 2 A DG 2 1_555 B N4 DC 3 B DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N3 DC 3 A DC 3 1_555 B N1 DG 2 B DG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N4 DC 3 A DC 3 1_555 B O6 DG 2 B DG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A O2 DC 3 A DC 3 1_555 B N2 DG 2 B DG 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N1 DG 4 A DG 4 1_555 B N3 CBR 1 B CBR 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N2 DG 4 A DG 4 1_555 B O2 CBR 1 B CBR 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A O6 DG 4 A DG 4 1_555 B N4 CBR 1 B CBR 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C42 H48 N6 O2 4' _chem_comp.formula_weight 668.87 _chem_comp.id FLD _chem_comp.mon_nstd_flag . _chem_comp.name BIS-(N-ETHYLPYRIDINIUM-(3-METHOXYCARBAZOLE))HEXANE-1,6-DIAMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms FLEXI-DI # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N2 FLD doub 110 n y C1 C17 FLD sing 111 n y C1 H1 FLD sing 112 n n N2 C3 FLD sing 113 n y N2 C19 FLD sing 114 n n C3 C4 FLD doub 115 n y C3 H3 FLD sing 116 n n C4 C12 FLD sing 117 n y C4 H4 FLD sing 118 n n C5 C6 FLD doub 119 n y C5 C12 FLD sing 120 n y C5 H5 FLD sing 121 n n C6 C13 FLD sing 122 n y C6 H6 FLD sing 123 n n N7 C13 FLD sing 124 n y N7 C14 FLD sing 125 n y N7 HN7 FLD sing 126 n n C8 C9 FLD sing 127 n y C8 C14 FLD doub 128 n y C8 H8 FLD sing 129 n n C9 C10 FLD doub 130 n y C9 H9 FLD sing 131 n n C10 O10 FLD sing 132 n n C10 C11 FLD sing 133 n y O10 C18 FLD sing 134 n n C11 C15 FLD doub 135 n y C11 H11 FLD sing 136 n n C12 C17 FLD doub 137 n y C13 C16 FLD doub 138 n y C14 C15 FLD sing 139 n y C15 C16 FLD sing 140 n y C16 C17 FLD sing 141 n y C18 H181 FLD sing 142 n n C18 H182 FLD sing 143 n n C18 H183 FLD sing 144 n n C19 C20 FLD sing 145 n n C19 H191 FLD sing 146 n n C19 H192 FLD sing 147 n n C20 N21 FLD sing 148 n n C20 H201 FLD sing 149 n n C20 H202 FLD sing 150 n n N21 C22 FLD sing 151 n n N21 HN21 FLD sing 152 n n N21 HN22 FLD sing 153 n n C22 C23 FLD sing 154 n n C22 H221 FLD sing 155 n n C22 H222 FLD sing 156 n n C23 C24 FLD sing 157 n n C23 H231 FLD sing 158 n n C23 H232 FLD sing 159 n n C24 COX FLD sing 160 n n C24 H241 FLD sing 161 n n C24 H242 FLD sing 162 n n C1X N2X FLD doub 163 n y C1X CHX FLD sing 164 n y C1X H1X FLD sing 165 n n N2X C3X FLD sing 166 n y N2X CJX FLD sing 167 n n C3X C4X FLD doub 168 n y C3X H3X FLD sing 169 n n C4X CCX FLD sing 170 n y C4X H4X FLD sing 171 n n C5X C6X FLD doub 172 n y C5X CCX FLD sing 173 n y C5X H5X FLD sing 174 n n C6X CDX FLD sing 175 n y C6X H6X FLD sing 176 n n N7X CDX FLD sing 177 n y N7X CEX FLD sing 178 n y N7X HN7X FLD sing 179 n n C8X C9X FLD sing 180 n y C8X CEX FLD doub 181 n y C8X H8X FLD sing 182 n n C9X CAX FLD doub 183 n y C9X H9X FLD sing 184 n n CAX OAX FLD sing 185 n n CAX CBX FLD sing 186 n y OAX CIX FLD sing 187 n n CBX CFX FLD doub 188 n y CBX H11X FLD sing 189 n n CCX CHX FLD doub 190 n y CDX CGX FLD doub 191 n y CEX CFX FLD sing 192 n y CFX CGX FLD sing 193 n y CGX CHX FLD sing 194 n y CIX HX81 FLD sing 195 n n CIX HX82 FLD sing 196 n n CIX HX83 FLD sing 197 n n CJX CKX FLD sing 198 n n CJX HX91 FLD sing 199 n n CJX HX92 FLD sing 200 n n CKX NLX FLD sing 201 n n CKX HX01 FLD sing 202 n n CKX HX02 FLD sing 203 n n NLX CMX FLD sing 204 n n NLX HN1X FLD sing 205 n n NLX HN2X FLD sing 206 n n CMX CNX FLD sing 207 n n CMX HX21 FLD sing 208 n n CMX HX22 FLD sing 209 n n CNX COX FLD sing 210 n n CNX HX31 FLD sing 211 n n CNX HX32 FLD sing 212 n n COX HX41 FLD sing 213 n n COX HX42 FLD sing 214 n n # _atom_sites.entry_id 154D _atom_sites.fract_transf_matrix[1][1] 0.036914 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.036914 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012212 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FLD B 1 9 9 FLD FLD . D 3 HOH A 1 12 12 HOH HOH . D 3 HOH A 2 17 17 HOH HOH . D 3 HOH A 3 18 18 HOH HOH . D 3 HOH A 4 20 20 HOH HOH . D 3 HOH A 5 24 24 HOH HOH . D 3 HOH A 6 26 26 HOH HOH . D 3 HOH A 7 27 27 HOH HOH . D 3 HOH A 8 28 28 HOH HOH . D 3 HOH A 9 32 32 HOH HOH . D 3 HOH A 10 34 34 HOH HOH . E 3 HOH B 1 10 10 HOH HOH . E 3 HOH B 2 11 11 HOH HOH . E 3 HOH B 3 13 13 HOH HOH . E 3 HOH B 4 14 14 HOH HOH . E 3 HOH B 5 15 15 HOH HOH . E 3 HOH B 6 16 16 HOH HOH . E 3 HOH B 7 19 19 HOH HOH . E 3 HOH B 8 21 21 HOH HOH . E 3 HOH B 9 22 22 HOH HOH . E 3 HOH B 10 23 23 HOH HOH . E 3 HOH B 11 25 25 HOH HOH . E 3 HOH B 12 29 29 HOH HOH . E 3 HOH B 13 30 30 HOH HOH . E 3 HOH B 14 31 31 HOH HOH . E 3 HOH B 15 33 33 HOH HOH . E 3 HOH B 16 35 35 HOH HOH . E 3 HOH B 17 36 36 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FLD . . . C 2 -2.924 14.186 36.202 1 5.23 ? C1 FLD 9 B 1 HETATM 2 N N2 FLD . . . C 2 -3.974 15.028 36.314 1 5.97 ? N2 FLD 9 B 1 HETATM 3 C C3 FLD . . . C 2 -3.858 16.302 36.369 1 5.25 ? C3 FLD 9 B 1 HETATM 4 C C4 FLD . . . C 2 -2.61 16.871 36.349 1 4.74 ? C4 FLD 9 B 1 HETATM 5 C C5 FLD . . . C 2 -0.343 16.647 36.237 1 4.49 ? C5 FLD 9 B 1 HETATM 6 C C6 FLD . . . C 2 0.769 15.858 36.112 1 4.42 ? C6 FLD 9 B 1 HETATM 7 N N7 FLD . . . C 2 1.597 13.671 35.891 1 4.98 ? N7 FLD 9 B 1 HETATM 8 C C8 FLD . . . C 2 1.6 11.336 35.742 1 4.42 ? C8 FLD 9 B 1 HETATM 9 C C9 FLD . . . C 2 0.827 10.217 35.716 1 4.31 ? C9 FLD 9 B 1 HETATM 10 C C10 FLD . . . C 2 -0.52 10.316 35.82 1 4.39 ? C10 FLD 9 B 1 HETATM 11 O O10 FLD . . . C 2 -1.184 9.139 35.77 1 5.58 ? O10 FLD 9 B 1 HETATM 12 C C11 FLD . . . C 2 -1.105 11.556 35.931 1 4.6 ? C11 FLD 9 B 1 HETATM 13 C C12 FLD . . . C 2 -1.558 16.056 36.26 1 4.35 ? C12 FLD 9 B 1 HETATM 14 C C13 FLD . . . C 2 0.654 14.594 36.01 1 4.54 ? C13 FLD 9 B 1 HETATM 15 C C14 FLD . . . C 2 1.039 12.476 35.854 1 4.51 ? C14 FLD 9 B 1 HETATM 16 C C15 FLD . . . C 2 -0.381 12.636 35.948 1 4.62 ? C15 FLD 9 B 1 HETATM 17 C C16 FLD . . . C 2 -0.617 13.947 36.042 1 4.51 ? C16 FLD 9 B 1 HETATM 18 C C17 FLD . . . C 2 -1.656 14.698 36.164 1 4.7 ? C17 FLD 9 B 1 HETATM 19 C C18 FLD . . . C 2 -2.575 9.225 35.883 1 5.58 ? C18 FLD 9 B 1 HETATM 20 C C19 FLD . . . C 2 -5.335 14.4 36.315 1 7.75 ? C19 FLD 9 B 1 HETATM 21 C C20 FLD . . . C 2 -5.421 13.495 34.971 1 10.25 ? C20 FLD 9 B 1 HETATM 22 N N21 FLD . . . C 2 -5.665 14.483 33.821 1 11.78 ? N21 FLD 9 B 1 HETATM 23 C C22 FLD . . . C 2 -5.388 13.935 32.473 1 13.37 ? C22 FLD 9 B 1 HETATM 24 C C23 FLD . . . C 2 -5.399 12.378 32.363 1 13.98 ? C23 FLD 9 B 1 HETATM 25 C C24 FLD . . . C 2 -6.29 12.015 31.117 1 13.82 ? C24 FLD 9 B 1 HETATM 26 C C1X FLD . . . C 2 -2.7 11.253 25.328 1 6.24 ? C1X FLD 9 B 1 HETATM 27 N N2X FLD . . . C 2 -3.311 10.09 25.193 1 7.3 ? N2X FLD 9 B 1 HETATM 28 C C3X FLD . . . C 2 -2.673 8.941 25.104 1 6.32 ? C3X FLD 9 B 1 HETATM 29 C C4X FLD . . . C 2 -1.308 8.938 25.162 1 6.05 ? C4X FLD 9 B 1 HETATM 30 C C5X FLD . . . C 2 0.677 10.082 25.379 1 5.88 ? C5X FLD 9 B 1 HETATM 31 C C6X FLD . . . C 2 1.365 11.256 25.547 1 5.95 ? C6X FLD 9 B 1 HETATM 32 N N7X FLD . . . C 2 1.217 13.597 25.817 1 6.04 ? N7X FLD 9 B 1 HETATM 33 C C8X FLD . . . C 2 0.241 15.722 25.987 1 5.98 ? C8X FLD 9 B 1 HETATM 34 C C9X FLD . . . C 2 -0.9 16.454 25.985 1 5.91 ? C9X FLD 9 B 1 HETATM 35 C CAX FLD . . . C 2 -2.104 15.783 25.848 1 6.07 ? CAX FLD 9 B 1 HETATM 36 O OAX FLD . . . C 2 -3.186 16.595 25.862 1 6.95 ? OAX FLD 9 B 1 HETATM 37 C CBX FLD . . . C 2 -2.116 14.432 25.695 1 5.79 ? CBX FLD 9 B 1 HETATM 38 C CCX FLD . . . C 2 -0.67 10.112 25.301 1 5.91 ? CCX FLD 9 B 1 HETATM 39 C CDX FLD . . . C 2 0.733 12.373 25.633 1 5.87 ? CDX FLD 9 B 1 HETATM 40 C CEX FLD . . . C 2 0.199 14.444 25.841 1 5.68 ? CEX FLD 9 B 1 HETATM 41 C CFX FLD . . . C 2 -1.01 13.734 25.675 1 5.64 ? CFX FLD 9 B 1 HETATM 42 C CGX FLD . . . C 2 -0.694 12.441 25.561 1 5.59 ? CGX FLD 9 B 1 HETATM 43 C CHX FLD . . . C 2 -1.331 11.325 25.405 1 5.91 ? CHX FLD 9 B 1 HETATM 44 C CIX FLD . . . C 2 -4.409 16.019 25.838 1 6.85 ? CIX FLD 9 B 1 HETATM 45 C CJX FLD . . . C 2 -4.816 10.024 25.097 1 9.19 ? CJX FLD 9 B 1 HETATM 46 C CKX FLD . . . C 2 -5.603 10.79 26.152 1 11.29 ? CKX FLD 9 B 1 HETATM 47 N NLX FLD . . . C 2 -5.082 10.444 27.595 1 12.53 ? NLX FLD 9 B 1 HETATM 48 C CMX FLD . . . C 2 -6.139 9.552 28.262 1 13.05 ? CMX FLD 9 B 1 HETATM 49 C CNX FLD . . . C 2 -6.23 9.846 29.788 1 13.75 ? CNX FLD 9 B 1 HETATM 50 C COX FLD . . . C 2 -5.481 11.104 30.19 1 13.93 ? COX FLD 9 B 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 50 #