data_17GS # _model_server_result.job_id xXsI3y_eEF0uYj3wHTJtiQ _model_server_result.datetime_utc '2024-11-16 16:31:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 17gs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":210}' # _entry.id 17GS # _exptl.entry_id 17GS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 392.491 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description S-HEXYLGLUTATHIONE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.61 _cell.angle_gamma 90 _cell.entry_id 17GS _cell.length_a 79.213 _cell.length_b 90.228 _cell.length_c 69.254 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 17GS _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # _chem_comp.formula 'C16 H30 N3 O6 S 1' _chem_comp.formula_weight 392.491 _chem_comp.id GTX _chem_comp.mon_nstd_flag . _chem_comp.name S-HEXYLGLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GTX sing 129 n n N1 HN11 GTX sing 130 n n N1 HN12 GTX sing 131 n n N1 HN13 GTX sing 132 n n CA1 C1 GTX sing 133 n n CA1 CB1 GTX sing 134 n n CA1 HA1 GTX sing 135 n n C1 O11 GTX doub 136 n n C1 O12 GTX sing 137 n n O12 HO2 GTX sing 138 n n CB1 CG1 GTX sing 139 n n CB1 HB11 GTX sing 140 n n CB1 HB12 GTX sing 141 n n CG1 CD1 GTX sing 142 n n CG1 HG11 GTX sing 143 n n CG1 HG12 GTX sing 144 n n CD1 OE1 GTX doub 145 n n CD1 N2 GTX sing 146 n n N2 CA2 GTX sing 147 n n N2 HN2 GTX sing 148 n n CA2 C2 GTX sing 149 n n CA2 CB2 GTX sing 150 n n CA2 HA2 GTX sing 151 n n C2 O2 GTX doub 152 n n C2 N3 GTX sing 153 n n CB2 SG2 GTX sing 154 n n CB2 HB21 GTX sing 155 n n CB2 HB22 GTX sing 156 n n SG2 C1S GTX sing 157 n n C1S C2S GTX sing 158 n n C1S HS11 GTX sing 159 n n C1S HS12 GTX sing 160 n n C2S C3S GTX sing 161 n n C2S HS21 GTX sing 162 n n C2S HS22 GTX sing 163 n n C3S C4S GTX sing 164 n n C3S HS31 GTX sing 165 n n C3S HS32 GTX sing 166 n n C4S C5S GTX sing 167 n n C4S HS41 GTX sing 168 n n C4S HS42 GTX sing 169 n n C5S C6S GTX sing 170 n n C5S HS51 GTX sing 171 n n C5S HS52 GTX sing 172 n n C6S HS61 GTX sing 173 n n C6S HS62 GTX sing 174 n n C6S HS63 GTX sing 175 n n N3 CA3 GTX sing 176 n n N3 HN3 GTX sing 177 n n CA3 C3 GTX sing 178 n n CA3 HA31 GTX sing 179 n n CA3 HA32 GTX sing 180 n n C3 O31 GTX doub 181 n n C3 O32 GTX sing 182 n n O32 HO3 GTX sing 183 n n # _atom_sites.entry_id 17GS _atom_sites.fract_transf_matrix[1][1] 0.012624 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001911 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011083 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014604 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GTX A 1 210 1 GTX GTX . D 3 MES A 1 211 2 MES MES . E 3 MES A 1 212 2 MES MES . F 2 GTX B 1 210 1 GTX GTX . G 3 MES B 1 211 2 MES MES . H 4 HOH A 1 213 3 HOH HOH . H 4 HOH A 2 214 5 HOH HOH . H 4 HOH A 3 215 10 HOH HOH . H 4 HOH A 4 216 11 HOH HOH . H 4 HOH A 5 217 13 HOH HOH . H 4 HOH A 6 218 14 HOH HOH . H 4 HOH A 7 219 16 HOH HOH . H 4 HOH A 8 220 19 HOH HOH . H 4 HOH A 9 221 20 HOH HOH . H 4 HOH A 10 222 21 HOH HOH . H 4 HOH A 11 223 22 HOH HOH . H 4 HOH A 12 224 23 HOH HOH . H 4 HOH A 13 225 25 HOH HOH . H 4 HOH A 14 226 27 HOH HOH . H 4 HOH A 15 227 28 HOH HOH . H 4 HOH A 16 228 29 HOH HOH . H 4 HOH A 17 229 30 HOH HOH . H 4 HOH A 18 230 31 HOH HOH . H 4 HOH A 19 231 33 HOH HOH . H 4 HOH A 20 232 34 HOH HOH . H 4 HOH A 21 233 37 HOH HOH . H 4 HOH A 22 234 39 HOH HOH . H 4 HOH A 23 235 40 HOH HOH . H 4 HOH A 24 236 41 HOH HOH . H 4 HOH A 25 237 46 HOH HOH . H 4 HOH A 26 238 48 HOH HOH . H 4 HOH A 27 239 50 HOH HOH . H 4 HOH A 28 240 51 HOH HOH . H 4 HOH A 29 241 52 HOH HOH . H 4 HOH A 30 242 53 HOH HOH . H 4 HOH A 31 243 54 HOH HOH . H 4 HOH A 32 244 55 HOH HOH . H 4 HOH A 33 245 57 HOH HOH . H 4 HOH A 34 246 58 HOH HOH . H 4 HOH A 35 247 64 HOH HOH . H 4 HOH A 36 248 67 HOH HOH . H 4 HOH A 37 249 68 HOH HOH . H 4 HOH A 38 250 69 HOH HOH . H 4 HOH A 39 251 71 HOH HOH . H 4 HOH A 40 252 72 HOH HOH . H 4 HOH A 41 253 74 HOH HOH . H 4 HOH A 42 254 75 HOH HOH . H 4 HOH A 43 255 76 HOH HOH . H 4 HOH A 44 256 77 HOH HOH . H 4 HOH A 45 257 79 HOH HOH . H 4 HOH A 46 258 88 HOH HOH . H 4 HOH A 47 259 90 HOH HOH . H 4 HOH A 48 260 96 HOH HOH . H 4 HOH A 49 261 97 HOH HOH . H 4 HOH A 50 262 98 HOH HOH . H 4 HOH A 51 263 99 HOH HOH . H 4 HOH A 52 264 100 HOH HOH . H 4 HOH A 53 265 102 HOH HOH . H 4 HOH A 54 266 104 HOH HOH . H 4 HOH A 55 267 105 HOH HOH . H 4 HOH A 56 268 108 HOH HOH . H 4 HOH A 57 269 110 HOH HOH . H 4 HOH A 58 270 111 HOH HOH . H 4 HOH A 59 271 114 HOH HOH . H 4 HOH A 60 272 116 HOH HOH . H 4 HOH A 61 273 118 HOH HOH . H 4 HOH A 62 274 119 HOH HOH . H 4 HOH A 63 275 120 HOH HOH . H 4 HOH A 64 276 122 HOH HOH . H 4 HOH A 65 277 125 HOH HOH . H 4 HOH A 66 278 130 HOH HOH . H 4 HOH A 67 279 131 HOH HOH . H 4 HOH A 68 280 132 HOH HOH . H 4 HOH A 69 281 134 HOH HOH . H 4 HOH A 70 282 135 HOH HOH . H 4 HOH A 71 283 137 HOH HOH . H 4 HOH A 72 284 140 HOH HOH . H 4 HOH A 73 285 143 HOH HOH . H 4 HOH A 74 286 146 HOH HOH . H 4 HOH A 75 287 149 HOH HOH . H 4 HOH A 76 288 151 HOH HOH . H 4 HOH A 77 289 152 HOH HOH . H 4 HOH A 78 290 153 HOH HOH . H 4 HOH A 79 291 158 HOH HOH . H 4 HOH A 80 292 160 HOH HOH . H 4 HOH A 81 293 163 HOH HOH . H 4 HOH A 82 294 164 HOH HOH . H 4 HOH A 83 295 165 HOH HOH . H 4 HOH A 84 296 169 HOH HOH . H 4 HOH A 85 297 171 HOH HOH . H 4 HOH A 86 298 174 HOH HOH . H 4 HOH A 87 299 181 HOH HOH . H 4 HOH A 88 300 183 HOH HOH . H 4 HOH A 89 301 184 HOH HOH . H 4 HOH A 90 302 185 HOH HOH . H 4 HOH A 91 303 187 HOH HOH . H 4 HOH A 92 304 189 HOH HOH . H 4 HOH A 93 305 190 HOH HOH . H 4 HOH A 94 306 191 HOH HOH . H 4 HOH A 95 307 193 HOH HOH . H 4 HOH A 96 308 194 HOH HOH . H 4 HOH A 97 309 195 HOH HOH . H 4 HOH A 98 310 197 HOH HOH . H 4 HOH A 99 311 198 HOH HOH . H 4 HOH A 100 312 199 HOH HOH . H 4 HOH A 101 313 202 HOH HOH . H 4 HOH A 102 314 203 HOH HOH . H 4 HOH A 103 315 207 HOH HOH . H 4 HOH A 104 316 209 HOH HOH . I 4 HOH B 1 212 4 HOH HOH . I 4 HOH B 2 213 6 HOH HOH . I 4 HOH B 3 214 7 HOH HOH . I 4 HOH B 4 215 8 HOH HOH . I 4 HOH B 5 216 9 HOH HOH . I 4 HOH B 6 217 12 HOH HOH . I 4 HOH B 7 218 15 HOH HOH . I 4 HOH B 8 219 17 HOH HOH . I 4 HOH B 9 220 18 HOH HOH . I 4 HOH B 10 221 24 HOH HOH . I 4 HOH B 11 222 26 HOH HOH . I 4 HOH B 12 223 32 HOH HOH . I 4 HOH B 13 224 35 HOH HOH . I 4 HOH B 14 225 36 HOH HOH . I 4 HOH B 15 226 38 HOH HOH . I 4 HOH B 16 227 42 HOH HOH . I 4 HOH B 17 228 43 HOH HOH . I 4 HOH B 18 229 44 HOH HOH . I 4 HOH B 19 230 45 HOH HOH . I 4 HOH B 20 231 47 HOH HOH . I 4 HOH B 21 232 49 HOH HOH . I 4 HOH B 22 233 56 HOH HOH . I 4 HOH B 23 234 59 HOH HOH . I 4 HOH B 24 235 60 HOH HOH . I 4 HOH B 25 236 61 HOH HOH . I 4 HOH B 26 237 62 HOH HOH . I 4 HOH B 27 238 63 HOH HOH . I 4 HOH B 28 239 65 HOH HOH . I 4 HOH B 29 240 66 HOH HOH . I 4 HOH B 30 241 70 HOH HOH . I 4 HOH B 31 242 73 HOH HOH . I 4 HOH B 32 243 78 HOH HOH . I 4 HOH B 33 244 80 HOH HOH . I 4 HOH B 34 245 81 HOH HOH . I 4 HOH B 35 246 82 HOH HOH . I 4 HOH B 36 247 83 HOH HOH . I 4 HOH B 37 248 85 HOH HOH . I 4 HOH B 38 249 86 HOH HOH . I 4 HOH B 39 250 87 HOH HOH . I 4 HOH B 40 251 89 HOH HOH . I 4 HOH B 41 252 91 HOH HOH . I 4 HOH B 42 253 92 HOH HOH . I 4 HOH B 43 254 93 HOH HOH . I 4 HOH B 44 255 94 HOH HOH . I 4 HOH B 45 256 95 HOH HOH . I 4 HOH B 46 257 101 HOH HOH . I 4 HOH B 47 258 103 HOH HOH . I 4 HOH B 48 259 106 HOH HOH . I 4 HOH B 49 260 107 HOH HOH . I 4 HOH B 50 261 109 HOH HOH . I 4 HOH B 51 262 112 HOH HOH . I 4 HOH B 52 263 113 HOH HOH . I 4 HOH B 53 264 115 HOH HOH . I 4 HOH B 54 265 117 HOH HOH . I 4 HOH B 55 266 121 HOH HOH . I 4 HOH B 56 267 123 HOH HOH . I 4 HOH B 57 268 124 HOH HOH . I 4 HOH B 58 269 126 HOH HOH . I 4 HOH B 59 270 127 HOH HOH . I 4 HOH B 60 271 128 HOH HOH . I 4 HOH B 61 272 129 HOH HOH . I 4 HOH B 62 273 133 HOH HOH . I 4 HOH B 63 274 136 HOH HOH . I 4 HOH B 64 275 138 HOH HOH . I 4 HOH B 65 276 139 HOH HOH . I 4 HOH B 66 277 141 HOH HOH . I 4 HOH B 67 278 142 HOH HOH . I 4 HOH B 68 279 144 HOH HOH . I 4 HOH B 69 280 145 HOH HOH . I 4 HOH B 70 281 147 HOH HOH . I 4 HOH B 71 282 148 HOH HOH . I 4 HOH B 72 283 150 HOH HOH . I 4 HOH B 73 284 154 HOH HOH . I 4 HOH B 74 285 155 HOH HOH . I 4 HOH B 75 286 156 HOH HOH . I 4 HOH B 76 287 157 HOH HOH . I 4 HOH B 77 288 159 HOH HOH . I 4 HOH B 78 289 161 HOH HOH . I 4 HOH B 79 290 162 HOH HOH . I 4 HOH B 80 291 166 HOH HOH . I 4 HOH B 81 292 167 HOH HOH . I 4 HOH B 82 293 168 HOH HOH . I 4 HOH B 83 294 170 HOH HOH . I 4 HOH B 84 295 172 HOH HOH . I 4 HOH B 85 296 173 HOH HOH . I 4 HOH B 86 297 175 HOH HOH . I 4 HOH B 87 298 176 HOH HOH . I 4 HOH B 88 299 177 HOH HOH . I 4 HOH B 89 300 178 HOH HOH . I 4 HOH B 90 301 179 HOH HOH . I 4 HOH B 91 302 180 HOH HOH . I 4 HOH B 92 303 182 HOH HOH . I 4 HOH B 93 304 186 HOH HOH . I 4 HOH B 94 305 188 HOH HOH . I 4 HOH B 95 306 192 HOH HOH . I 4 HOH B 96 307 196 HOH HOH . I 4 HOH B 97 308 200 HOH HOH . I 4 HOH B 98 309 201 HOH HOH . I 4 HOH B 99 310 204 HOH HOH . I 4 HOH B 100 311 205 HOH HOH . I 4 HOH B 101 312 206 HOH HOH . I 4 HOH B 102 313 208 HOH HOH . I 4 HOH B 103 314 210 HOH HOH . I 4 HOH B 104 315 211 HOH HOH . I 4 HOH B 105 316 212 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GTX . . . F 2 16.959 12.915 10.056 1 13.44 ? N1 GTX 210 B 1 HETATM 2 C CA1 GTX . . . F 2 17.123 13.75 8.842 1 16.01 ? CA1 GTX 210 B 1 HETATM 3 C C1 GTX . . . F 2 18.016 14.929 9.187 1 16.88 ? C1 GTX 210 B 1 HETATM 4 O O11 GTX . . . F 2 18.761 15.411 8.302 1 13.94 ? O11 GTX 210 B 1 HETATM 5 O O12 GTX . . . F 2 17.985 15.327 10.365 1 14.08 ? O12 GTX 210 B 1 HETATM 6 C CB1 GTX . . . F 2 15.762 14.238 8.363 1 15.94 ? CB1 GTX 210 B 1 HETATM 7 C CG1 GTX . . . F 2 15.805 15.078 7.105 1 19.93 ? CG1 GTX 210 B 1 HETATM 8 C CD1 GTX . . . F 2 14.443 15.233 6.504 1 22.02 ? CD1 GTX 210 B 1 HETATM 9 O OE1 GTX . . . F 2 13.435 15.041 7.184 1 24.64 ? OE1 GTX 210 B 1 HETATM 10 N N2 GTX . . . F 2 14.396 15.579 5.227 1 24.55 ? N2 GTX 210 B 1 HETATM 11 C CA2 GTX . . . F 2 13.124 15.729 4.544 1 28.69 ? CA2 GTX 210 B 1 HETATM 12 C C2 GTX . . . F 2 13.297 15.469 3.058 1 27.24 ? C2 GTX 210 B 1 HETATM 13 O O2 GTX . . . F 2 14.406 15.558 2.515 1 21.49 ? O2 GTX 210 B 1 HETATM 14 C CB2 GTX . . . F 2 12.514 17.106 4.797 1 33.93 ? CB2 GTX 210 B 1 HETATM 15 S SG2 GTX . . . F 2 13.491 18.435 4.127 1 44.51 ? SG2 GTX 210 B 1 HETATM 16 C C1S GTX . . . F 2 12.697 19.854 4.887 1 45.12 ? C1S GTX 210 B 1 HETATM 17 C C2S GTX . . . F 2 11.369 20.244 4.258 1 45.25 ? C2S GTX 210 B 1 HETATM 18 C C3S GTX . . . F 2 11.534 20.75 2.842 1 43.8 ? C3S GTX 210 B 1 HETATM 19 C C4S GTX . . . F 2 10.357 21.628 2.464 1 46.82 ? C4S GTX 210 B 1 HETATM 20 C C5S GTX . . . F 2 10.449 22.134 1.034 1 50.23 ? C5S GTX 210 B 1 HETATM 21 C C6S GTX . . . F 2 10.138 21.034 0.044 1 51.78 ? C6S GTX 210 B 1 HETATM 22 N N3 GTX . . . F 2 12.184 15.172 2.406 1 28.36 ? N3 GTX 210 B 1 HETATM 23 C CA3 GTX . . . F 2 12.198 14.853 0.996 1 31.06 ? CA3 GTX 210 B 1 HETATM 24 C C3 GTX . . . F 2 11.693 13.433 0.839 1 34.72 ? C3 GTX 210 B 1 HETATM 25 O O31 GTX . . . F 2 11.345 13.052 -0.293 1 35.58 ? O31 GTX 210 B 1 HETATM 26 O O32 GTX . . . F 2 11.616 12.706 1.858 1 34.86 ? O32 GTX 210 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 26 #