data_183L # _model_server_result.job_id 5Bo5gaoRFYRM7tCfhCi_Bw _model_server_result.datetime_utc '2024-11-08 04:07:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 183l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":170}' # _entry.id 183L # _exptl.entry_id 183L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.251 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-HYDROXYETHYL DISULFIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 183L _cell.length_a 60.7 _cell.length_b 60.7 _cell.length_c 97.2 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 183L _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O2 S2' _chem_comp.formula_weight 154.251 _chem_comp.id HED _chem_comp.mon_nstd_flag . _chem_comp.name '2-HYDROXYETHYL DISULFIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HED sing 147 n n C1 C2 HED sing 148 n n C1 H11 HED sing 149 n n C1 H12 HED sing 150 n n O1 HO1 HED sing 151 n n C2 S3 HED sing 152 n n C2 H21 HED sing 153 n n C2 H22 HED sing 154 n n S3 S4 HED sing 155 n n S4 C5 HED sing 156 n n C5 C6 HED sing 157 n n C5 H51 HED sing 158 n n C5 H52 HED sing 159 n n C6 O6 HED sing 160 n n C6 H61 HED sing 161 n n C6 H62 HED sing 162 n n O6 HO6 HED sing 163 n n # _atom_sites.entry_id 183L _atom_sites.fract_transf_matrix[1][1] 0.016474 _atom_sites.fract_transf_matrix[1][2] 0.009512 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019023 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010288 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 173 173 CL CL . C 2 CL A 1 178 178 CL CL . D 3 HED A 1 170 170 HED HED . E 4 DEN A 1 400 400 DEN DEN . F 5 HOH A 1 171 171 HOH HOH . F 5 HOH A 2 172 172 HOH HOH . F 5 HOH A 3 174 174 HOH HOH . F 5 HOH A 4 175 175 HOH HOH . F 5 HOH A 5 176 176 HOH HOH . F 5 HOH A 6 177 177 HOH HOH . F 5 HOH A 7 179 179 HOH HOH . F 5 HOH A 8 180 180 HOH HOH . F 5 HOH A 9 181 181 HOH HOH . F 5 HOH A 10 182 182 HOH HOH . F 5 HOH A 11 183 183 HOH HOH . F 5 HOH A 12 184 184 HOH HOH . F 5 HOH A 13 185 185 HOH HOH . F 5 HOH A 14 186 186 HOH HOH . F 5 HOH A 15 187 187 HOH HOH . F 5 HOH A 16 188 188 HOH HOH . F 5 HOH A 17 189 189 HOH HOH . F 5 HOH A 18 190 190 HOH HOH . F 5 HOH A 19 191 191 HOH HOH . F 5 HOH A 20 192 192 HOH HOH . F 5 HOH A 21 193 193 HOH HOH . F 5 HOH A 22 194 194 HOH HOH . F 5 HOH A 23 195 195 HOH HOH . F 5 HOH A 24 196 196 HOH HOH . F 5 HOH A 25 198 198 HOH HOH . F 5 HOH A 26 200 200 HOH HOH . F 5 HOH A 27 201 201 HOH HOH . F 5 HOH A 28 202 202 HOH HOH . F 5 HOH A 29 203 203 HOH HOH . F 5 HOH A 30 204 204 HOH HOH . F 5 HOH A 31 207 207 HOH HOH . F 5 HOH A 32 208 208 HOH HOH . F 5 HOH A 33 209 209 HOH HOH . F 5 HOH A 34 210 210 HOH HOH . F 5 HOH A 35 211 211 HOH HOH . F 5 HOH A 36 213 213 HOH HOH . F 5 HOH A 37 214 214 HOH HOH . F 5 HOH A 38 215 215 HOH HOH . F 5 HOH A 39 216 216 HOH HOH . F 5 HOH A 40 217 217 HOH HOH . F 5 HOH A 41 218 218 HOH HOH . F 5 HOH A 42 219 219 HOH HOH . F 5 HOH A 43 220 220 HOH HOH . F 5 HOH A 44 221 221 HOH HOH . F 5 HOH A 45 222 222 HOH HOH . F 5 HOH A 46 223 223 HOH HOH . F 5 HOH A 47 224 224 HOH HOH . F 5 HOH A 48 225 225 HOH HOH . F 5 HOH A 49 226 226 HOH HOH . F 5 HOH A 50 227 227 HOH HOH . F 5 HOH A 51 229 229 HOH HOH . F 5 HOH A 52 230 230 HOH HOH . F 5 HOH A 53 231 231 HOH HOH . F 5 HOH A 54 232 232 HOH HOH . F 5 HOH A 55 233 233 HOH HOH . F 5 HOH A 56 235 235 HOH HOH . F 5 HOH A 57 236 236 HOH HOH . F 5 HOH A 58 237 237 HOH HOH . F 5 HOH A 59 238 238 HOH HOH . F 5 HOH A 60 239 239 HOH HOH . F 5 HOH A 61 240 240 HOH HOH . F 5 HOH A 62 242 242 HOH HOH . F 5 HOH A 63 244 244 HOH HOH . F 5 HOH A 64 245 245 HOH HOH . F 5 HOH A 65 246 246 HOH HOH . F 5 HOH A 66 247 247 HOH HOH . F 5 HOH A 67 248 248 HOH HOH . F 5 HOH A 68 249 249 HOH HOH . F 5 HOH A 69 250 250 HOH HOH . F 5 HOH A 70 251 251 HOH HOH . F 5 HOH A 71 253 253 HOH HOH . F 5 HOH A 72 256 256 HOH HOH . F 5 HOH A 73 258 258 HOH HOH . F 5 HOH A 74 259 259 HOH HOH . F 5 HOH A 75 261 261 HOH HOH . F 5 HOH A 76 266 266 HOH HOH . F 5 HOH A 77 267 267 HOH HOH . F 5 HOH A 78 268 268 HOH HOH . F 5 HOH A 79 269 269 HOH HOH . F 5 HOH A 80 270 270 HOH HOH . F 5 HOH A 81 271 271 HOH HOH . F 5 HOH A 82 272 272 HOH HOH . F 5 HOH A 83 273 273 HOH HOH . F 5 HOH A 84 274 274 HOH HOH . F 5 HOH A 85 277 277 HOH HOH . F 5 HOH A 86 278 278 HOH HOH . F 5 HOH A 87 279 279 HOH HOH . F 5 HOH A 88 280 280 HOH HOH . F 5 HOH A 89 281 281 HOH HOH . F 5 HOH A 90 282 282 HOH HOH . F 5 HOH A 91 283 283 HOH HOH . F 5 HOH A 92 284 284 HOH HOH . F 5 HOH A 93 286 286 HOH HOH . F 5 HOH A 94 288 288 HOH HOH . F 5 HOH A 95 292 292 HOH HOH . F 5 HOH A 96 293 293 HOH HOH . F 5 HOH A 97 295 295 HOH HOH . F 5 HOH A 98 296 296 HOH HOH . F 5 HOH A 99 298 298 HOH HOH . F 5 HOH A 100 299 299 HOH HOH . F 5 HOH A 101 300 300 HOH HOH . F 5 HOH A 102 301 301 HOH HOH . F 5 HOH A 103 303 303 HOH HOH . F 5 HOH A 104 306 306 HOH HOH . F 5 HOH A 105 308 308 HOH HOH . F 5 HOH A 106 311 311 HOH HOH . F 5 HOH A 107 312 312 HOH HOH . F 5 HOH A 108 313 313 HOH HOH . F 5 HOH A 109 314 314 HOH HOH . F 5 HOH A 110 317 317 HOH HOH . F 5 HOH A 111 321 321 HOH HOH . F 5 HOH A 112 323 323 HOH HOH . F 5 HOH A 113 324 324 HOH HOH . F 5 HOH A 114 325 325 HOH HOH . F 5 HOH A 115 326 326 HOH HOH . F 5 HOH A 116 328 328 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HED . . . D 3 31.882 -1.209 15.205 1 32.41 ? C1 HED 170 A 1 HETATM 2 O O1 HED . . . D 3 33.089 -0.811 15.845 1 34.88 ? O1 HED 170 A 1 HETATM 3 C C2 HED . . . D 3 31.957 -0.58 13.855 1 25.8 ? C2 HED 170 A 1 HETATM 4 S S3 HED . . . D 3 33.134 -1.531 12.896 1 91.91 ? S3 HED 170 A 1 HETATM 5 S S4 HED . . . D 3 32.505 -1.245 10.956 1 100 ? S4 HED 170 A 1 HETATM 6 C C5 HED . . . D 3 32.392 -2.913 10.246 1 100 ? C5 HED 170 A 1 HETATM 7 C C6 HED . . . D 3 33.692 -3.379 9.549 1 100 ? C6 HED 170 A 1 HETATM 8 O O6 HED . . . D 3 34.311 -2.3 8.861 1 53.84 ? O6 HED 170 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #