data_185L # _model_server_result.job_id JgkIai7S-jXcNXfsMZoH_A _model_server_result.datetime_utc '2024-11-24 11:30:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 185l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":170}' # _entry.id 185L # _exptl.entry_id 185L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 154.251 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-HYDROXYETHYL DISULFIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 185L _cell.length_a 60.7 _cell.length_b 60.7 _cell.length_c 97.6 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 185L _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O2 S2' _chem_comp.formula_weight 154.251 _chem_comp.id HED _chem_comp.mon_nstd_flag . _chem_comp.name '2-HYDROXYETHYL DISULFIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 HED sing 129 n n C1 C2 HED sing 130 n n C1 H11 HED sing 131 n n C1 H12 HED sing 132 n n O1 HO1 HED sing 133 n n C2 S3 HED sing 134 n n C2 H21 HED sing 135 n n C2 H22 HED sing 136 n n S3 S4 HED sing 137 n n S4 C5 HED sing 138 n n C5 C6 HED sing 139 n n C5 H51 HED sing 140 n n C5 H52 HED sing 141 n n C6 O6 HED sing 142 n n C6 H61 HED sing 143 n n C6 H62 HED sing 144 n n O6 HO6 HED sing 145 n n # _atom_sites.entry_id 185L _atom_sites.fract_transf_matrix[1][1] 0.016474 _atom_sites.fract_transf_matrix[1][2] 0.009512 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019023 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010246 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 173 173 CL CL . C 2 CL A 1 178 178 CL CL . D 3 HED A 1 170 170 HED HED . E 4 IND A 1 400 400 IND IND . F 5 HOH A 1 171 171 HOH HOH . F 5 HOH A 2 172 172 HOH HOH . F 5 HOH A 3 174 174 HOH HOH . F 5 HOH A 4 175 175 HOH HOH . F 5 HOH A 5 176 176 HOH HOH . F 5 HOH A 6 177 177 HOH HOH . F 5 HOH A 7 179 179 HOH HOH . F 5 HOH A 8 180 180 HOH HOH . F 5 HOH A 9 181 181 HOH HOH . F 5 HOH A 10 182 182 HOH HOH . F 5 HOH A 11 183 183 HOH HOH . F 5 HOH A 12 184 184 HOH HOH . F 5 HOH A 13 185 185 HOH HOH . F 5 HOH A 14 186 186 HOH HOH . F 5 HOH A 15 187 187 HOH HOH . F 5 HOH A 16 188 188 HOH HOH . F 5 HOH A 17 189 189 HOH HOH . F 5 HOH A 18 190 190 HOH HOH . F 5 HOH A 19 191 191 HOH HOH . F 5 HOH A 20 192 192 HOH HOH . F 5 HOH A 21 193 193 HOH HOH . F 5 HOH A 22 194 194 HOH HOH . F 5 HOH A 23 195 195 HOH HOH . F 5 HOH A 24 196 196 HOH HOH . F 5 HOH A 25 197 197 HOH HOH . F 5 HOH A 26 200 200 HOH HOH . F 5 HOH A 27 201 201 HOH HOH . F 5 HOH A 28 202 202 HOH HOH . F 5 HOH A 29 203 203 HOH HOH . F 5 HOH A 30 204 204 HOH HOH . F 5 HOH A 31 206 206 HOH HOH . F 5 HOH A 32 207 207 HOH HOH . F 5 HOH A 33 208 208 HOH HOH . F 5 HOH A 34 209 209 HOH HOH . F 5 HOH A 35 210 210 HOH HOH . F 5 HOH A 36 211 211 HOH HOH . F 5 HOH A 37 213 213 HOH HOH . F 5 HOH A 38 214 214 HOH HOH . F 5 HOH A 39 215 215 HOH HOH . F 5 HOH A 40 216 216 HOH HOH . F 5 HOH A 41 217 217 HOH HOH . F 5 HOH A 42 218 218 HOH HOH . F 5 HOH A 43 219 219 HOH HOH . F 5 HOH A 44 220 220 HOH HOH . F 5 HOH A 45 221 221 HOH HOH . F 5 HOH A 46 222 222 HOH HOH . F 5 HOH A 47 223 223 HOH HOH . F 5 HOH A 48 224 224 HOH HOH . F 5 HOH A 49 225 225 HOH HOH . F 5 HOH A 50 226 226 HOH HOH . F 5 HOH A 51 227 227 HOH HOH . F 5 HOH A 52 228 228 HOH HOH . F 5 HOH A 53 229 229 HOH HOH . F 5 HOH A 54 230 230 HOH HOH . F 5 HOH A 55 231 231 HOH HOH . F 5 HOH A 56 232 232 HOH HOH . F 5 HOH A 57 233 233 HOH HOH . F 5 HOH A 58 234 234 HOH HOH . F 5 HOH A 59 235 235 HOH HOH . F 5 HOH A 60 236 236 HOH HOH . F 5 HOH A 61 237 237 HOH HOH . F 5 HOH A 62 238 238 HOH HOH . F 5 HOH A 63 239 239 HOH HOH . F 5 HOH A 64 240 240 HOH HOH . F 5 HOH A 65 242 242 HOH HOH . F 5 HOH A 66 244 244 HOH HOH . F 5 HOH A 67 245 245 HOH HOH . F 5 HOH A 68 246 246 HOH HOH . F 5 HOH A 69 247 247 HOH HOH . F 5 HOH A 70 248 248 HOH HOH . F 5 HOH A 71 249 249 HOH HOH . F 5 HOH A 72 250 250 HOH HOH . F 5 HOH A 73 251 251 HOH HOH . F 5 HOH A 74 253 253 HOH HOH . F 5 HOH A 75 254 254 HOH HOH . F 5 HOH A 76 256 256 HOH HOH . F 5 HOH A 77 257 257 HOH HOH . F 5 HOH A 78 258 258 HOH HOH . F 5 HOH A 79 259 259 HOH HOH . F 5 HOH A 80 260 260 HOH HOH . F 5 HOH A 81 261 261 HOH HOH . F 5 HOH A 82 266 266 HOH HOH . F 5 HOH A 83 267 267 HOH HOH . F 5 HOH A 84 268 268 HOH HOH . F 5 HOH A 85 269 269 HOH HOH . F 5 HOH A 86 270 270 HOH HOH . F 5 HOH A 87 271 271 HOH HOH . F 5 HOH A 88 272 272 HOH HOH . F 5 HOH A 89 273 273 HOH HOH . F 5 HOH A 90 274 274 HOH HOH . F 5 HOH A 91 277 277 HOH HOH . F 5 HOH A 92 278 278 HOH HOH . F 5 HOH A 93 279 279 HOH HOH . F 5 HOH A 94 280 280 HOH HOH . F 5 HOH A 95 281 281 HOH HOH . F 5 HOH A 96 282 282 HOH HOH . F 5 HOH A 97 283 283 HOH HOH . F 5 HOH A 98 284 284 HOH HOH . F 5 HOH A 99 285 285 HOH HOH . F 5 HOH A 100 286 286 HOH HOH . F 5 HOH A 101 288 288 HOH HOH . F 5 HOH A 102 289 289 HOH HOH . F 5 HOH A 103 290 290 HOH HOH . F 5 HOH A 104 293 293 HOH HOH . F 5 HOH A 105 294 294 HOH HOH . F 5 HOH A 106 295 295 HOH HOH . F 5 HOH A 107 296 296 HOH HOH . F 5 HOH A 108 297 297 HOH HOH . F 5 HOH A 109 298 298 HOH HOH . F 5 HOH A 110 299 299 HOH HOH . F 5 HOH A 111 300 300 HOH HOH . F 5 HOH A 112 301 301 HOH HOH . F 5 HOH A 113 303 303 HOH HOH . F 5 HOH A 114 304 304 HOH HOH . F 5 HOH A 115 306 306 HOH HOH . F 5 HOH A 116 308 308 HOH HOH . F 5 HOH A 117 311 311 HOH HOH . F 5 HOH A 118 312 312 HOH HOH . F 5 HOH A 119 313 313 HOH HOH . F 5 HOH A 120 315 315 HOH HOH . F 5 HOH A 121 316 316 HOH HOH . F 5 HOH A 122 317 317 HOH HOH . F 5 HOH A 123 318 318 HOH HOH . F 5 HOH A 124 320 320 HOH HOH . F 5 HOH A 125 321 321 HOH HOH . F 5 HOH A 126 322 322 HOH HOH . F 5 HOH A 127 323 323 HOH HOH . F 5 HOH A 128 324 324 HOH HOH . F 5 HOH A 129 325 325 HOH HOH . F 5 HOH A 130 326 326 HOH HOH . F 5 HOH A 131 327 327 HOH HOH . F 5 HOH A 132 328 328 HOH HOH . F 5 HOH A 133 330 330 HOH HOH . F 5 HOH A 134 331 331 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HED . . . D 3 32.161 -1.295 15.294 1 42.21 ? C1 HED 170 A 1 HETATM 2 O O1 HED . . . D 3 33.437 -1.041 15.889 1 49.76 ? O1 HED 170 A 1 HETATM 3 C C2 HED . . . D 3 32.227 -0.692 13.903 1 36.81 ? C2 HED 170 A 1 HETATM 4 S S3 HED . . . D 3 33.589 -1.452 13.006 1 68.22 ? S3 HED 170 A 1 HETATM 5 S S4 HED . . . D 3 33.58 -0.56 11.163 1 100 ? S4 HED 170 A 1 HETATM 6 C C5 HED . . . D 3 32.873 -1.822 10.069 1 36.68 ? C5 HED 170 A 1 HETATM 7 C C6 HED . . . D 3 33.886 -2.934 9.712 1 100 ? C6 HED 170 A 1 HETATM 8 O O6 HED . . . D 3 34.977 -2.382 8.996 1 63.89 ? O6 HED 170 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #