data_187L # _model_server_result.job_id iTjFU1zxZIgTmfPjmoTihw _model_server_result.datetime_utc '2024-11-08 04:07:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 187l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":400}' # _entry.id 187L # _exptl.entry_id 187L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.165 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PARA-XYLENE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 187L _cell.length_a 60.9 _cell.length_b 60.9 _cell.length_c 97.1 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 187L _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H10' _chem_comp.formula_weight 106.165 _chem_comp.id PXY _chem_comp.mon_nstd_flag . _chem_comp.name PARA-XYLENE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 PXY doub 294 n y C1 C6 PXY sing 295 n y C1 C1' PXY sing 296 n n C2 C3 PXY sing 297 n y C2 H2 PXY sing 298 n n C3 C4 PXY doub 299 n y C3 H3 PXY sing 300 n n C4 C5 PXY sing 301 n y C4 C4' PXY sing 302 n n C5 C6 PXY doub 303 n y C5 H5 PXY sing 304 n n C6 H6 PXY sing 305 n n C1' "H1'1" PXY sing 306 n n C1' "H1'2" PXY sing 307 n n C1' "H1'3" PXY sing 308 n n C4' "H4'1" PXY sing 309 n n C4' "H4'2" PXY sing 310 n n C4' "H4'3" PXY sing 311 n n # _atom_sites.entry_id 187L _atom_sites.fract_transf_matrix[1][1] 0.01642 _atom_sites.fract_transf_matrix[1][2] 0.00948 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018961 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010299 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 173 173 CL CL . C 2 CL A 1 178 178 CL CL . D 3 HED A 1 170 170 HED HED . E 4 PXY A 1 400 400 PXY PXY . F 5 HOH A 1 171 171 HOH HOH . F 5 HOH A 2 172 172 HOH HOH . F 5 HOH A 3 174 174 HOH HOH . F 5 HOH A 4 175 175 HOH HOH . F 5 HOH A 5 176 176 HOH HOH . F 5 HOH A 6 177 177 HOH HOH . F 5 HOH A 7 179 179 HOH HOH . F 5 HOH A 8 180 180 HOH HOH . F 5 HOH A 9 181 181 HOH HOH . F 5 HOH A 10 182 182 HOH HOH . F 5 HOH A 11 183 183 HOH HOH . F 5 HOH A 12 184 184 HOH HOH . F 5 HOH A 13 185 185 HOH HOH . F 5 HOH A 14 186 186 HOH HOH . F 5 HOH A 15 187 187 HOH HOH . F 5 HOH A 16 188 188 HOH HOH . F 5 HOH A 17 189 189 HOH HOH . F 5 HOH A 18 190 190 HOH HOH . F 5 HOH A 19 191 191 HOH HOH . F 5 HOH A 20 192 192 HOH HOH . F 5 HOH A 21 193 193 HOH HOH . F 5 HOH A 22 194 194 HOH HOH . F 5 HOH A 23 195 195 HOH HOH . F 5 HOH A 24 196 196 HOH HOH . F 5 HOH A 25 198 198 HOH HOH . F 5 HOH A 26 200 200 HOH HOH . F 5 HOH A 27 201 201 HOH HOH . F 5 HOH A 28 202 202 HOH HOH . F 5 HOH A 29 203 203 HOH HOH . F 5 HOH A 30 204 204 HOH HOH . F 5 HOH A 31 207 207 HOH HOH . F 5 HOH A 32 208 208 HOH HOH . F 5 HOH A 33 209 209 HOH HOH . F 5 HOH A 34 210 210 HOH HOH . F 5 HOH A 35 211 211 HOH HOH . F 5 HOH A 36 213 213 HOH HOH . F 5 HOH A 37 214 214 HOH HOH . F 5 HOH A 38 215 215 HOH HOH . F 5 HOH A 39 216 216 HOH HOH . F 5 HOH A 40 217 217 HOH HOH . F 5 HOH A 41 218 218 HOH HOH . F 5 HOH A 42 219 219 HOH HOH . F 5 HOH A 43 220 220 HOH HOH . F 5 HOH A 44 221 221 HOH HOH . F 5 HOH A 45 222 222 HOH HOH . F 5 HOH A 46 223 223 HOH HOH . F 5 HOH A 47 224 224 HOH HOH . F 5 HOH A 48 225 225 HOH HOH . F 5 HOH A 49 226 226 HOH HOH . F 5 HOH A 50 227 227 HOH HOH . F 5 HOH A 51 228 228 HOH HOH . F 5 HOH A 52 229 229 HOH HOH . F 5 HOH A 53 230 230 HOH HOH . F 5 HOH A 54 231 231 HOH HOH . F 5 HOH A 55 232 232 HOH HOH . F 5 HOH A 56 233 233 HOH HOH . F 5 HOH A 57 234 234 HOH HOH . F 5 HOH A 58 235 235 HOH HOH . F 5 HOH A 59 237 237 HOH HOH . F 5 HOH A 60 238 238 HOH HOH . F 5 HOH A 61 239 239 HOH HOH . F 5 HOH A 62 240 240 HOH HOH . F 5 HOH A 63 242 242 HOH HOH . F 5 HOH A 64 244 244 HOH HOH . F 5 HOH A 65 245 245 HOH HOH . F 5 HOH A 66 246 246 HOH HOH . F 5 HOH A 67 247 247 HOH HOH . F 5 HOH A 68 248 248 HOH HOH . F 5 HOH A 69 249 249 HOH HOH . F 5 HOH A 70 250 250 HOH HOH . F 5 HOH A 71 251 251 HOH HOH . F 5 HOH A 72 253 253 HOH HOH . F 5 HOH A 73 254 254 HOH HOH . F 5 HOH A 74 256 256 HOH HOH . F 5 HOH A 75 259 259 HOH HOH . F 5 HOH A 76 261 261 HOH HOH . F 5 HOH A 77 262 262 HOH HOH . F 5 HOH A 78 263 263 HOH HOH . F 5 HOH A 79 265 265 HOH HOH . F 5 HOH A 80 266 266 HOH HOH . F 5 HOH A 81 267 267 HOH HOH . F 5 HOH A 82 268 268 HOH HOH . F 5 HOH A 83 269 269 HOH HOH . F 5 HOH A 84 270 270 HOH HOH . F 5 HOH A 85 271 271 HOH HOH . F 5 HOH A 86 272 272 HOH HOH . F 5 HOH A 87 273 273 HOH HOH . F 5 HOH A 88 274 274 HOH HOH . F 5 HOH A 89 277 277 HOH HOH . F 5 HOH A 90 278 278 HOH HOH . F 5 HOH A 91 280 280 HOH HOH . F 5 HOH A 92 281 281 HOH HOH . F 5 HOH A 93 282 282 HOH HOH . F 5 HOH A 94 284 284 HOH HOH . F 5 HOH A 95 285 285 HOH HOH . F 5 HOH A 96 286 286 HOH HOH . F 5 HOH A 97 288 288 HOH HOH . F 5 HOH A 98 289 289 HOH HOH . F 5 HOH A 99 290 290 HOH HOH . F 5 HOH A 100 292 292 HOH HOH . F 5 HOH A 101 293 293 HOH HOH . F 5 HOH A 102 294 294 HOH HOH . F 5 HOH A 103 295 295 HOH HOH . F 5 HOH A 104 296 296 HOH HOH . F 5 HOH A 105 297 297 HOH HOH . F 5 HOH A 106 298 298 HOH HOH . F 5 HOH A 107 299 299 HOH HOH . F 5 HOH A 108 300 300 HOH HOH . F 5 HOH A 109 301 301 HOH HOH . F 5 HOH A 110 302 302 HOH HOH . F 5 HOH A 111 303 303 HOH HOH . F 5 HOH A 112 306 306 HOH HOH . F 5 HOH A 113 307 307 HOH HOH . F 5 HOH A 114 308 308 HOH HOH . F 5 HOH A 115 311 311 HOH HOH . F 5 HOH A 116 312 312 HOH HOH . F 5 HOH A 117 313 313 HOH HOH . F 5 HOH A 118 314 314 HOH HOH . F 5 HOH A 119 317 317 HOH HOH . F 5 HOH A 120 321 321 HOH HOH . F 5 HOH A 121 322 322 HOH HOH . F 5 HOH A 122 323 323 HOH HOH . F 5 HOH A 123 324 324 HOH HOH . F 5 HOH A 124 325 325 HOH HOH . F 5 HOH A 125 326 326 HOH HOH . F 5 HOH A 126 328 328 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PXY . . . E 4 26.645 6.141 4.668 1 25.86 ? C1 PXY 400 A 1 HETATM 2 C C2 PXY . . . E 4 26.781 5.671 3.444 1 26.29 ? C2 PXY 400 A 1 HETATM 3 C C3 PXY . . . E 4 27.27 6.472 2.435 1 28.03 ? C3 PXY 400 A 1 HETATM 4 C C4 PXY . . . E 4 27.583 7.775 2.686 1 34.72 ? C4 PXY 400 A 1 HETATM 5 C C5 PXY . . . E 4 27.442 8.266 3.939 1 36.14 ? C5 PXY 400 A 1 HETATM 6 C C6 PXY . . . E 4 26.979 7.434 4.947 1 38.36 ? C6 PXY 400 A 1 HETATM 7 C C1' PXY . . . E 4 26.137 5.226 5.77 1 40.8 ? C1' PXY 400 A 1 HETATM 8 C C4' PXY . . . E 4 28.102 8.664 1.552 1 57.42 ? C4' PXY 400 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 251 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 8 #