data_1A0G # _model_server_result.job_id i_QyvKjUAzhOIxCjFMbq7w _model_server_result.datetime_utc '2025-03-06 08:48:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1a0g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":285}' # _entry.id 1A0G # _exptl.entry_id 1A0G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 248.173 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1A0G _cell.length_a 77.34 _cell.length_b 91.76 _cell.length_c 88.69 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1A0G _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C8 H13 N2 O5 P' _chem_comp.formula_weight 248.173 _chem_comp.id PMP _chem_comp.mon_nstd_flag . _chem_comp.name "4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms "PYRIDOXAMINE-5'-PHOSPHATE" # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 PMP doub 260 n y N1 C6 PMP sing 261 n y C2 C2A PMP sing 262 n n C2 C3 PMP sing 263 n y C2A H2A1 PMP sing 264 n n C2A H2A2 PMP sing 265 n n C2A H2A3 PMP sing 266 n n C3 O3 PMP sing 267 n n C3 C4 PMP doub 268 n y O3 HO3 PMP sing 269 n n C4 C4A PMP sing 270 n n C4 C5 PMP sing 271 n y C4A N4A PMP sing 272 n n C4A H4A1 PMP sing 273 n n C4A H4A2 PMP sing 274 n n N4A HNA1 PMP sing 275 n n N4A HNA2 PMP sing 276 n n C5 C6 PMP doub 277 n y C5 C5A PMP sing 278 n n C6 H6 PMP sing 279 n n C5A O4P PMP sing 280 n n C5A H5A1 PMP sing 281 n n C5A H5A2 PMP sing 282 n n O4P P PMP sing 283 n n P O1P PMP doub 284 n n P O2P PMP sing 285 n n P O3P PMP sing 286 n n O2P HOP2 PMP sing 287 n n O3P HOP3 PMP sing 288 n n # _atom_sites.entry_id 1A0G _atom_sites.fract_transf_matrix[1][1] 0.01293 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010898 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011275 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PMP A 1 285 285 PMP PMP . D 2 PMP B 1 285 285 PMP PMP . E 3 HOH A 1 307 307 HOH HOH . E 3 HOH A 2 308 308 HOH HOH . E 3 HOH A 3 311 311 HOH HOH . E 3 HOH A 4 315 315 HOH HOH . E 3 HOH A 5 316 316 HOH HOH . E 3 HOH A 6 317 317 HOH HOH . E 3 HOH A 7 319 319 HOH HOH . E 3 HOH A 8 322 322 HOH HOH . E 3 HOH A 9 324 324 HOH HOH . E 3 HOH A 10 327 327 HOH HOH . E 3 HOH A 11 328 328 HOH HOH . E 3 HOH A 12 332 332 HOH HOH . E 3 HOH A 13 342 342 HOH HOH . E 3 HOH A 14 343 343 HOH HOH . E 3 HOH A 15 344 344 HOH HOH . E 3 HOH A 16 346 346 HOH HOH . E 3 HOH A 17 347 347 HOH HOH . E 3 HOH A 18 348 348 HOH HOH . E 3 HOH A 19 350 350 HOH HOH . E 3 HOH A 20 351 351 HOH HOH . E 3 HOH A 21 352 352 HOH HOH . E 3 HOH A 22 353 353 HOH HOH . E 3 HOH A 23 355 355 HOH HOH . E 3 HOH A 24 356 356 HOH HOH . E 3 HOH A 25 358 358 HOH HOH . E 3 HOH A 26 360 360 HOH HOH . E 3 HOH A 27 361 361 HOH HOH . E 3 HOH A 28 362 362 HOH HOH . E 3 HOH A 29 363 363 HOH HOH . E 3 HOH A 30 364 364 HOH HOH . E 3 HOH A 31 366 366 HOH HOH . E 3 HOH A 32 367 367 HOH HOH . E 3 HOH A 33 368 368 HOH HOH . E 3 HOH A 34 372 372 HOH HOH . E 3 HOH A 35 373 373 HOH HOH . E 3 HOH A 36 374 374 HOH HOH . E 3 HOH A 37 376 376 HOH HOH . E 3 HOH A 38 377 377 HOH HOH . E 3 HOH A 39 379 379 HOH HOH . E 3 HOH A 40 380 380 HOH HOH . E 3 HOH A 41 381 381 HOH HOH . E 3 HOH A 42 382 382 HOH HOH . E 3 HOH A 43 384 384 HOH HOH . E 3 HOH A 44 385 385 HOH HOH . E 3 HOH A 45 387 387 HOH HOH . E 3 HOH A 46 388 388 HOH HOH . E 3 HOH A 47 389 389 HOH HOH . E 3 HOH A 48 393 393 HOH HOH . E 3 HOH A 49 396 396 HOH HOH . E 3 HOH A 50 399 399 HOH HOH . E 3 HOH A 51 402 402 HOH HOH . E 3 HOH A 52 403 403 HOH HOH . E 3 HOH A 53 405 405 HOH HOH . E 3 HOH A 54 407 407 HOH HOH . E 3 HOH A 55 408 408 HOH HOH . E 3 HOH A 56 410 410 HOH HOH . E 3 HOH A 57 411 411 HOH HOH . E 3 HOH A 58 412 412 HOH HOH . E 3 HOH A 59 413 413 HOH HOH . E 3 HOH A 60 414 414 HOH HOH . E 3 HOH A 61 415 415 HOH HOH . E 3 HOH A 62 418 418 HOH HOH . E 3 HOH A 63 419 419 HOH HOH . E 3 HOH A 64 422 422 HOH HOH . E 3 HOH A 65 425 425 HOH HOH . E 3 HOH A 66 426 426 HOH HOH . E 3 HOH A 67 427 427 HOH HOH . E 3 HOH A 68 429 429 HOH HOH . E 3 HOH A 69 431 431 HOH HOH . E 3 HOH A 70 433 433 HOH HOH . E 3 HOH A 71 435 435 HOH HOH . E 3 HOH A 72 437 437 HOH HOH . E 3 HOH A 73 439 439 HOH HOH . E 3 HOH A 74 440 440 HOH HOH . E 3 HOH A 75 441 441 HOH HOH . E 3 HOH A 76 442 442 HOH HOH . E 3 HOH A 77 443 443 HOH HOH . E 3 HOH A 78 444 444 HOH HOH . E 3 HOH A 79 449 449 HOH HOH . E 3 HOH A 80 450 450 HOH HOH . E 3 HOH A 81 451 451 HOH HOH . E 3 HOH A 82 452 452 HOH HOH . E 3 HOH A 83 453 453 HOH HOH . E 3 HOH A 84 454 454 HOH HOH . E 3 HOH A 85 456 456 HOH HOH . E 3 HOH A 86 460 460 HOH HOH . E 3 HOH A 87 461 461 HOH HOH . E 3 HOH A 88 462 462 HOH HOH . E 3 HOH A 89 463 463 HOH HOH . E 3 HOH A 90 465 465 HOH HOH . F 3 HOH B 1 301 301 HOH HOH . F 3 HOH B 2 302 302 HOH HOH . F 3 HOH B 3 303 303 HOH HOH . F 3 HOH B 4 304 304 HOH HOH . F 3 HOH B 5 305 305 HOH HOH . F 3 HOH B 6 306 306 HOH HOH . F 3 HOH B 7 309 309 HOH HOH . F 3 HOH B 8 310 310 HOH HOH . F 3 HOH B 9 312 312 HOH HOH . F 3 HOH B 10 313 313 HOH HOH . F 3 HOH B 11 314 314 HOH HOH . F 3 HOH B 12 318 318 HOH HOH . F 3 HOH B 13 320 320 HOH HOH . F 3 HOH B 14 321 321 HOH HOH . F 3 HOH B 15 323 323 HOH HOH . F 3 HOH B 16 325 325 HOH HOH . F 3 HOH B 17 326 326 HOH HOH . F 3 HOH B 18 329 329 HOH HOH . F 3 HOH B 19 330 330 HOH HOH . F 3 HOH B 20 331 331 HOH HOH . F 3 HOH B 21 333 333 HOH HOH . F 3 HOH B 22 334 334 HOH HOH . F 3 HOH B 23 335 335 HOH HOH . F 3 HOH B 24 336 336 HOH HOH . F 3 HOH B 25 337 337 HOH HOH . F 3 HOH B 26 338 338 HOH HOH . F 3 HOH B 27 339 339 HOH HOH . F 3 HOH B 28 340 340 HOH HOH . F 3 HOH B 29 341 341 HOH HOH . F 3 HOH B 30 345 345 HOH HOH . F 3 HOH B 31 349 349 HOH HOH . F 3 HOH B 32 354 354 HOH HOH . F 3 HOH B 33 357 357 HOH HOH . F 3 HOH B 34 359 359 HOH HOH . F 3 HOH B 35 365 365 HOH HOH . F 3 HOH B 36 369 369 HOH HOH . F 3 HOH B 37 370 370 HOH HOH . F 3 HOH B 38 371 371 HOH HOH . F 3 HOH B 39 375 375 HOH HOH . F 3 HOH B 40 378 378 HOH HOH . F 3 HOH B 41 383 383 HOH HOH . F 3 HOH B 42 386 386 HOH HOH . F 3 HOH B 43 390 390 HOH HOH . F 3 HOH B 44 391 391 HOH HOH . F 3 HOH B 45 392 392 HOH HOH . F 3 HOH B 46 394 394 HOH HOH . F 3 HOH B 47 395 395 HOH HOH . F 3 HOH B 48 397 397 HOH HOH . F 3 HOH B 49 398 398 HOH HOH . F 3 HOH B 50 400 400 HOH HOH . F 3 HOH B 51 401 401 HOH HOH . F 3 HOH B 52 404 404 HOH HOH . F 3 HOH B 53 406 406 HOH HOH . F 3 HOH B 54 409 409 HOH HOH . F 3 HOH B 55 416 416 HOH HOH . F 3 HOH B 56 417 417 HOH HOH . F 3 HOH B 57 420 420 HOH HOH . F 3 HOH B 58 421 421 HOH HOH . F 3 HOH B 59 423 423 HOH HOH . F 3 HOH B 60 424 424 HOH HOH . F 3 HOH B 61 428 428 HOH HOH . F 3 HOH B 62 430 430 HOH HOH . F 3 HOH B 63 432 432 HOH HOH . F 3 HOH B 64 434 434 HOH HOH . F 3 HOH B 65 436 436 HOH HOH . F 3 HOH B 66 438 438 HOH HOH . F 3 HOH B 67 445 445 HOH HOH . F 3 HOH B 68 446 446 HOH HOH . F 3 HOH B 69 447 447 HOH HOH . F 3 HOH B 70 448 448 HOH HOH . F 3 HOH B 71 455 455 HOH HOH . F 3 HOH B 72 457 457 HOH HOH . F 3 HOH B 73 458 458 HOH HOH . F 3 HOH B 74 459 459 HOH HOH . F 3 HOH B 75 464 464 HOH HOH . F 3 HOH B 76 466 466 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 PMP . . . C 2 42.738 18.579 11.175 1 38.38 ? N1 PMP 285 A 1 HETATM 2 C C2 PMP . . . C 2 42.636 18.045 12.444 1 40.14 ? C2 PMP 285 A 1 HETATM 3 C C2A PMP . . . C 2 41.342 17.328 12.856 1 39.95 ? C2A PMP 285 A 1 HETATM 4 C C3 PMP . . . C 2 43.722 18.095 13.32 1 40.09 ? C3 PMP 285 A 1 HETATM 5 O O3 PMP . . . C 2 43.622 17.566 14.59 1 41.66 ? O3 PMP 285 A 1 HETATM 6 C C4 PMP . . . C 2 44.905 18.698 12.925 1 39.81 ? C4 PMP 285 A 1 HETATM 7 C C4A PMP . . . C 2 46.148 18.765 13.891 1 40.95 ? C4A PMP 285 A 1 HETATM 8 N N4A PMP . . . C 2 45.881 18.787 15.239 1 41.49 ? N4A PMP 285 A 1 HETATM 9 C C5 PMP . . . C 2 45.002 19.22 11.641 1 37.51 ? C5 PMP 285 A 1 HETATM 10 C C6 PMP . . . C 2 43.911 19.177 10.779 1 38.04 ? C6 PMP 285 A 1 HETATM 11 C C5A PMP . . . C 2 46.341 19.787 11.156 1 32.24 ? C5A PMP 285 A 1 HETATM 12 O O4P PMP . . . C 2 46.398 21.192 10.989 1 26.22 ? O4P PMP 285 A 1 HETATM 13 P P PMP . . . C 2 47.595 22.014 11.557 1 20.36 ? P PMP 285 A 1 HETATM 14 O O1P PMP . . . C 2 47.054 23.314 11.94 1 20.2 ? O1P PMP 285 A 1 HETATM 15 O O2P PMP . . . C 2 48.492 22.33 10.337 1 23.84 ? O2P PMP 285 A 1 HETATM 16 O O3P PMP . . . C 2 48.385 21.191 12.497 1 22.24 ? O3P PMP 285 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 16 #