data_1A0L # _model_server_result.job_id YRuP329exz7YZGoOlsRm7A _model_server_result.datetime_utc '2024-11-30 04:02:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1a0l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 1A0L # _exptl.entry_id 1A0L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 208.214 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-3-(4-carbamimidoylphenyl)-2-hydroxypropanoic acid' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1A0L _cell.length_a 82.93 _cell.length_b 82.93 _cell.length_c 172.86 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1A0L _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 29 A CYS 42 1_555 A SG CYS 45 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 A SG CYS 125 A CYS 136 1_555 A SG CYS 200 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf3 A SG CYS 158 A CYS 168 1_555 A SG CYS 181 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf4 A SG CYS 190 A CYS 191 1_555 A SG CYS 218 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf5 B SG CYS 29 B CYS 42 1_555 B SG CYS 45 B CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf6 B SG CYS 125 B CYS 136 1_555 B SG CYS 200 B CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf7 B SG CYS 158 B CYS 168 1_555 B SG CYS 181 B CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf8 B SG CYS 190 B CYS 191 1_555 B SG CYS 218 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf9 C SG CYS 29 C CYS 42 1_555 C SG CYS 45 C CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf10 C SG CYS 125 C CYS 136 1_555 C SG CYS 200 C CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf11 C SG CYS 158 C CYS 168 1_555 C SG CYS 181 C CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf12 C SG CYS 190 C CYS 191 1_555 C SG CYS 218 C CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf13 D SG CYS 29 D CYS 42 1_555 D SG CYS 45 D CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf14 D SG CYS 125 D CYS 136 1_555 D SG CYS 200 D CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf15 D SG CYS 158 D CYS 168 1_555 D SG CYS 181 D CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf16 D SG CYS 190 D CYS 191 1_555 D SG CYS 218 D CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? covale ? covale1 A OG SER 194 A SER 195 1_555 E C2 APA . A APA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.455 ? covale ? covale2 B OG SER 194 B SER 195 1_555 F C2 APA . B APA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale3 C OG SER 194 C SER 195 1_555 G C2 APA . C APA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale4 D OG SER 194 D SER 195 1_555 H C2 APA . D APA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? # _chem_comp.formula 'C10 H12 N2 O3' _chem_comp.formula_weight 208.214 _chem_comp.id APA _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-3-(4-carbamimidoylphenyl)-2-hydroxypropanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 APA doub 13 n n C1 OXT APA sing 14 n n C1 C2 APA sing 15 n n OXT HXT APA sing 16 n n C2 O2 APA sing 17 n n C2 C3 APA sing 18 n n C3 C1' APA sing 19 n n C3 H31 APA sing 20 n n C3 H32 APA sing 21 n n C1' C2' APA doub 22 n y C1' C6' APA sing 23 n y C2' C3' APA sing 24 n y C2' H2' APA sing 25 n n C3' C4' APA doub 26 n y C3' H3' APA sing 27 n n C4' C5' APA sing 28 n y C4' C APA sing 29 n n C5' C6' APA doub 30 n y C5' H5' APA sing 31 n n C6' H6' APA sing 32 n n C N1 APA sing 33 n n C N2 APA doub 34 n n N1 HN11 APA sing 35 n n N1 HN12 APA sing 36 n n N2 HN2 APA sing 37 n n C2 H11 APA sing 38 n n O2 H12 APA sing 39 n n # _atom_sites.entry_id 1A0L _atom_sites.fract_transf_matrix[1][1] 0.012058 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012058 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005785 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 APA A 1 301 301 APA APA . F 2 APA B 1 301 301 APA APA . G 2 APA C 1 301 301 APA APA . H 2 APA D 1 301 301 APA APA . I 3 HOH A 1 500 500 HOH HOH . I 3 HOH A 2 501 501 HOH HOH . I 3 HOH A 3 502 502 HOH HOH . I 3 HOH A 4 503 503 HOH HOH . I 3 HOH A 5 504 504 HOH HOH . I 3 HOH A 6 505 505 HOH HOH . I 3 HOH A 7 506 506 HOH HOH . I 3 HOH A 8 507 507 HOH HOH . I 3 HOH A 9 508 508 HOH HOH . I 3 HOH A 10 510 510 HOH HOH . I 3 HOH A 11 511 511 HOH HOH . I 3 HOH A 12 512 512 HOH HOH . I 3 HOH A 13 513 513 HOH HOH . I 3 HOH A 14 514 514 HOH HOH . I 3 HOH A 15 515 515 HOH HOH . I 3 HOH A 16 516 516 HOH HOH . I 3 HOH A 17 517 517 HOH HOH . I 3 HOH A 18 518 518 HOH HOH . I 3 HOH A 19 519 519 HOH HOH . I 3 HOH A 20 522 522 HOH HOH . I 3 HOH A 21 525 525 HOH HOH . I 3 HOH A 22 526 526 HOH HOH . I 3 HOH A 23 527 527 HOH HOH . I 3 HOH A 24 573 573 HOH HOH . I 3 HOH A 25 581 581 HOH HOH . I 3 HOH A 26 582 582 HOH HOH . J 3 HOH B 1 529 529 HOH HOH . J 3 HOH B 2 530 530 HOH HOH . J 3 HOH B 3 531 531 HOH HOH . J 3 HOH B 4 532 532 HOH HOH . J 3 HOH B 5 533 533 HOH HOH . J 3 HOH B 6 534 534 HOH HOH . J 3 HOH B 7 535 535 HOH HOH . J 3 HOH B 8 537 537 HOH HOH . J 3 HOH B 9 538 538 HOH HOH . J 3 HOH B 10 539 539 HOH HOH . J 3 HOH B 11 574 574 HOH HOH . J 3 HOH B 12 588 588 HOH HOH . J 3 HOH B 13 590 590 HOH HOH . J 3 HOH B 14 591 591 HOH HOH . J 3 HOH B 15 597 597 HOH HOH . J 3 HOH B 16 599 599 HOH HOH . J 3 HOH B 17 601 601 HOH HOH . J 3 HOH B 18 603 603 HOH HOH . J 3 HOH B 19 604 604 HOH HOH . J 3 HOH B 20 605 605 HOH HOH . J 3 HOH B 21 606 606 HOH HOH . J 3 HOH B 22 608 608 HOH HOH . J 3 HOH B 23 609 609 HOH HOH . J 3 HOH B 24 610 610 HOH HOH . J 3 HOH B 25 627 627 HOH HOH . K 3 HOH C 1 544 544 HOH HOH . K 3 HOH C 2 545 545 HOH HOH . K 3 HOH C 3 546 546 HOH HOH . K 3 HOH C 4 547 547 HOH HOH . K 3 HOH C 5 549 549 HOH HOH . K 3 HOH C 6 565 565 HOH HOH . K 3 HOH C 7 600 600 HOH HOH . K 3 HOH C 8 612 612 HOH HOH . K 3 HOH C 9 616 616 HOH HOH . K 3 HOH C 10 617 617 HOH HOH . K 3 HOH C 11 621 621 HOH HOH . K 3 HOH C 12 622 622 HOH HOH . K 3 HOH C 13 623 623 HOH HOH . K 3 HOH C 14 626 626 HOH HOH . K 3 HOH C 15 628 628 HOH HOH . K 3 HOH C 16 629 629 HOH HOH . K 3 HOH C 17 630 630 HOH HOH . L 3 HOH D 1 552 552 HOH HOH . L 3 HOH D 2 553 553 HOH HOH . L 3 HOH D 3 554 554 HOH HOH . L 3 HOH D 4 555 555 HOH HOH . L 3 HOH D 5 556 556 HOH HOH . L 3 HOH D 6 557 557 HOH HOH . L 3 HOH D 7 558 558 HOH HOH . L 3 HOH D 8 559 559 HOH HOH . L 3 HOH D 9 560 560 HOH HOH . L 3 HOH D 10 561 561 HOH HOH . L 3 HOH D 11 562 562 HOH HOH . L 3 HOH D 12 564 564 HOH HOH . L 3 HOH D 13 566 566 HOH HOH . L 3 HOH D 14 579 579 HOH HOH . L 3 HOH D 15 631 631 HOH HOH . L 3 HOH D 16 632 632 HOH HOH . L 3 HOH D 17 633 633 HOH HOH . L 3 HOH D 18 635 635 HOH HOH . L 3 HOH D 19 637 637 HOH HOH . L 3 HOH D 20 639 639 HOH HOH . L 3 HOH D 21 640 640 HOH HOH . L 3 HOH D 22 641 641 HOH HOH . L 3 HOH D 23 642 642 HOH HOH . L 3 HOH D 24 643 643 HOH HOH . L 3 HOH D 25 644 644 HOH HOH . L 3 HOH D 26 645 645 HOH HOH . L 3 HOH D 27 649 649 HOH HOH . L 3 HOH D 28 651 651 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 APA . . . E 2 55.96 46.587 84.429 1 20.22 ? C1 APA 301 A 1 HETATM 2 O O1 APA . . . E 2 57.297 46.914 84.368 1 21.51 ? O1 APA 301 A 1 HETATM 3 O OXT APA . . . E 2 55.283 46.05 85.312 1 20.45 ? OXT APA 301 A 1 HETATM 4 C C2 APA . . . E 2 55.181 47.012 83.093 1 18.59 ? C2 APA 301 A 1 HETATM 5 O O2 APA . . . E 2 56.106 47.667 82.238 1 19.16 ? O2 APA 301 A 1 HETATM 6 C C3 APA . . . E 2 54.845 45.687 82.366 1 18.63 ? C3 APA 301 A 1 HETATM 7 C C1' APA . . . E 2 54.512 45.654 80.865 1 18.98 ? C1' APA 301 A 1 HETATM 8 C C2' APA . . . E 2 54.777 44.602 79.987 1 20.76 ? C2' APA 301 A 1 HETATM 9 C C3' APA . . . E 2 54.489 44.531 78.612 1 21.25 ? C3' APA 301 A 1 HETATM 10 C C4' APA . . . E 2 53.854 45.677 78.055 1 22.01 ? C4' APA 301 A 1 HETATM 11 C C5' APA . . . E 2 53.585 46.741 78.945 1 20.92 ? C5' APA 301 A 1 HETATM 12 C C6' APA . . . E 2 53.897 46.745 80.295 1 19.78 ? C6' APA 301 A 1 HETATM 13 C C APA . . . E 2 53.484 45.809 76.704 1 23.8 ? C APA 301 A 1 HETATM 14 N N1 APA . . . E 2 53.716 44.851 75.826 1 24.39 ? N1 APA 301 A 1 HETATM 15 N N2 APA . . . E 2 52.891 46.905 76.236 1 24.21 ? N2 APA 301 A 1 # _model_server_stats.io_time_ms 100 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 15 #