data_1A0Q # _model_server_result.job_id SKasNNIicPzsFMP3KQniqA _model_server_result.datetime_utc '2024-11-15 16:18:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1a0q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":214}' # _entry.id 1A0Q # _exptl.entry_id 1A0Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 343.312 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHENYL[1-(N-SUCCINYLAMINO)PENTYL]PHOSPHONATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1A0Q _cell.length_a 36.78 _cell.length_b 82.61 _cell.length_c 132.34 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1A0Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 88 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf2 A SG CYS 133 L CYS 134 1_555 A SG CYS 193 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf4 B SG CYS 146 H CYS 140 1_555 B SG CYS 201 H CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc1 A OE1 GLU 184 L GLU 185 1_555 C ZN ZN . L ZN 214 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.732 ? metalc ? metalc2 B NE2 HIS 32 H HIS 32 1_555 D ZN ZN . H ZN 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? # _chem_comp.formula 'C15 H22 N O6 P' _chem_comp.formula_weight 343.312 _chem_comp.id HEP _chem_comp.mon_nstd_flag . _chem_comp.name PHENYL[1-(N-SUCCINYLAMINO)PENTYL]PHOSPHONATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1A0Q _atom_sites.fract_transf_matrix[1][1] 0.027189 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012105 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007556 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN L 1 214 1 ZN ZN . D 3 ZN H 1 212 2 ZN ZN . E 3 ZN H 1 213 3 ZN ZN . F 4 HEP H 1 214 4 HEP HEP . G 5 HOH L 1 215 5 HOH HOH . G 5 HOH L 2 216 6 HOH HOH . G 5 HOH L 3 217 7 HOH HOH . G 5 HOH L 4 218 9 HOH HOH . G 5 HOH L 5 219 23 HOH HOH . G 5 HOH L 6 220 30 HOH HOH . G 5 HOH L 7 221 31 HOH HOH . G 5 HOH L 8 222 37 HOH HOH . G 5 HOH L 9 223 38 HOH HOH . G 5 HOH L 10 224 39 HOH HOH . G 5 HOH L 11 225 40 HOH HOH . G 5 HOH L 12 226 41 HOH HOH . G 5 HOH L 13 227 42 HOH HOH . G 5 HOH L 14 228 43 HOH HOH . G 5 HOH L 15 229 44 HOH HOH . G 5 HOH L 16 230 55 HOH HOH . G 5 HOH L 17 231 56 HOH HOH . G 5 HOH L 18 232 57 HOH HOH . G 5 HOH L 19 233 58 HOH HOH . G 5 HOH L 20 234 59 HOH HOH . G 5 HOH L 21 235 60 HOH HOH . G 5 HOH L 22 236 61 HOH HOH . G 5 HOH L 23 237 62 HOH HOH . G 5 HOH L 24 238 63 HOH HOH . G 5 HOH L 25 239 64 HOH HOH . G 5 HOH L 26 240 65 HOH HOH . G 5 HOH L 27 241 66 HOH HOH . G 5 HOH L 28 242 67 HOH HOH . G 5 HOH L 29 243 68 HOH HOH . G 5 HOH L 30 244 69 HOH HOH . G 5 HOH L 31 245 70 HOH HOH . G 5 HOH L 32 246 71 HOH HOH . G 5 HOH L 33 247 72 HOH HOH . G 5 HOH L 34 248 73 HOH HOH . G 5 HOH L 35 249 74 HOH HOH . G 5 HOH L 36 250 75 HOH HOH . G 5 HOH L 37 251 76 HOH HOH . G 5 HOH L 38 252 87 HOH HOH . G 5 HOH L 39 253 88 HOH HOH . G 5 HOH L 40 254 89 HOH HOH . G 5 HOH L 41 255 90 HOH HOH . G 5 HOH L 42 256 91 HOH HOH . G 5 HOH L 43 257 92 HOH HOH . G 5 HOH L 44 258 94 HOH HOH . G 5 HOH L 45 259 95 HOH HOH . H 5 HOH H 1 215 8 HOH HOH . H 5 HOH H 2 216 10 HOH HOH . H 5 HOH H 3 217 11 HOH HOH . H 5 HOH H 4 218 12 HOH HOH . H 5 HOH H 5 219 13 HOH HOH . H 5 HOH H 6 220 14 HOH HOH . H 5 HOH H 7 221 15 HOH HOH . H 5 HOH H 8 222 16 HOH HOH . H 5 HOH H 9 223 17 HOH HOH . H 5 HOH H 10 224 18 HOH HOH . H 5 HOH H 11 225 19 HOH HOH . H 5 HOH H 12 226 20 HOH HOH . H 5 HOH H 13 227 21 HOH HOH . H 5 HOH H 14 228 22 HOH HOH . H 5 HOH H 15 229 24 HOH HOH . H 5 HOH H 16 230 25 HOH HOH . H 5 HOH H 17 231 26 HOH HOH . H 5 HOH H 18 232 27 HOH HOH . H 5 HOH H 19 233 28 HOH HOH . H 5 HOH H 20 234 29 HOH HOH . H 5 HOH H 21 235 32 HOH HOH . H 5 HOH H 22 236 33 HOH HOH . H 5 HOH H 23 237 34 HOH HOH . H 5 HOH H 24 238 35 HOH HOH . H 5 HOH H 25 239 36 HOH HOH . H 5 HOH H 26 240 45 HOH HOH . H 5 HOH H 27 241 46 HOH HOH . H 5 HOH H 28 242 47 HOH HOH . H 5 HOH H 29 243 48 HOH HOH . H 5 HOH H 30 244 49 HOH HOH . H 5 HOH H 31 245 50 HOH HOH . H 5 HOH H 32 246 51 HOH HOH . H 5 HOH H 33 247 52 HOH HOH . H 5 HOH H 34 248 53 HOH HOH . H 5 HOH H 35 249 54 HOH HOH . H 5 HOH H 36 250 77 HOH HOH . H 5 HOH H 37 251 78 HOH HOH . H 5 HOH H 38 252 79 HOH HOH . H 5 HOH H 39 253 80 HOH HOH . H 5 HOH H 40 254 81 HOH HOH . H 5 HOH H 41 255 82 HOH HOH . H 5 HOH H 42 256 83 HOH HOH . H 5 HOH H 43 257 84 HOH HOH . H 5 HOH H 44 258 85 HOH HOH . H 5 HOH H 45 259 86 HOH HOH . H 5 HOH H 46 260 93 HOH HOH . H 5 HOH H 47 261 96 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HEP . . . F 4 13.305 20.7 59.405 1 37.73 ? C1 HEP 214 H 1 HETATM 2 C C2 HEP . . . F 4 12.452 19.842 58.47 1 28.63 ? C2 HEP 214 H 1 HETATM 3 C C3 HEP . . . F 4 12.032 18.534 59.124 1 26.59 ? C3 HEP 214 H 1 HETATM 4 C C4 HEP . . . F 4 11.247 17.631 58.188 1 26.23 ? C4 HEP 214 H 1 HETATM 5 C C5 HEP . . . F 4 12.107 17.104 57.026 1 27.8 ? C5 HEP 214 H 1 HETATM 6 C C6 HEP . . . F 4 14.735 20.992 55.347 1 29.95 ? C6 HEP 214 H 1 HETATM 7 C C7 HEP . . . F 4 15.148 21.138 54.025 1 23.22 ? C7 HEP 214 H 1 HETATM 8 C C8 HEP . . . F 4 16.384 21.71 53.741 1 24.42 ? C8 HEP 214 H 1 HETATM 9 C C9 HEP . . . F 4 17.211 22.14 54.77 1 21.21 ? C9 HEP 214 H 1 HETATM 10 C C10 HEP . . . F 4 16.799 21.998 56.094 1 28.7 ? C10 HEP 214 H 1 HETATM 11 C C11 HEP . . . F 4 15.562 21.42 56.389 1 34.8 ? C11 HEP 214 H 1 HETATM 12 C C12 HEP . . . F 4 12.798 20.933 61.805 1 50.73 ? C12 HEP 214 H 1 HETATM 13 C C13 HEP . . . F 4 11.743 20.696 64.174 1 63.74 ? C13 HEP 214 H 1 HETATM 14 C C14 HEP . . . F 4 11.861 21.497 62.87 1 53.6 ? C14 HEP 214 H 1 HETATM 15 C C15 HEP . . . F 4 11.153 19.293 64.035 1 68.76 ? C15 HEP 214 H 1 HETATM 16 O O1P HEP . . . F 4 12.999 22.51 57.513 1 29.36 ? O1P HEP 214 H 1 HETATM 17 O O2P HEP . . . F 4 14.579 22.964 59.471 1 35.62 ? O2P HEP 214 H 1 HETATM 18 O O3P HEP . . . F 4 15.175 21.222 57.75 1 34.95 ? O3P HEP 214 H 1 HETATM 19 O O4 HEP . . . F 4 13.762 20.23 62.121 1 46.83 ? O4 HEP 214 H 1 HETATM 20 O O5 HEP . . . F 4 11.938 18.345 64.018 1 71.23 ? O5 HEP 214 H 1 HETATM 21 O O6 HEP . . . F 4 9.963 19.134 64.311 1 73.51 ? O6 HEP 214 H 1 HETATM 22 N N1 HEP . . . F 4 12.483 21.182 60.518 1 45.65 ? N1 HEP 214 H 1 HETATM 23 P P HEP . . . F 4 13.984 22.021 58.499 1 31.93 ? P HEP 214 H 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 23 #