data_1A27 # _model_server_result.job_id RcrCwkBvh_0ZZBy6u6EBtg _model_server_result.datetime_utc '2024-11-17 17:41:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1a27 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":360}' # _entry.id 1A27 # _exptl.entry_id 1A27 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 743.405 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.13 _cell.angle_gamma 90 _cell.entry_id 1A27 _cell.length_a 111.38 _cell.length_b 48.54 _cell.length_c 60.77 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1A27 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H28 N7 O17 P3' _chem_comp.formula_weight 743.405 _chem_comp.id NAP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAP doub 284 n n PA O2A NAP sing 285 n n PA O5B NAP sing 286 n n PA O3 NAP sing 287 n n O2A HOA2 NAP sing 288 n n O5B C5B NAP sing 289 n n C5B C4B NAP sing 290 n n C5B H51A NAP sing 291 n n C5B H52A NAP sing 292 n n C4B O4B NAP sing 293 n n C4B C3B NAP sing 294 n n C4B H4B NAP sing 295 n n O4B C1B NAP sing 296 n n C3B O3B NAP sing 297 n n C3B C2B NAP sing 298 n n C3B H3B NAP sing 299 n n O3B HO3A NAP sing 300 n n C2B O2B NAP sing 301 n n C2B C1B NAP sing 302 n n C2B H2B NAP sing 303 n n O2B P2B NAP sing 304 n n C1B N9A NAP sing 305 n n C1B H1B NAP sing 306 n n N9A C8A NAP sing 307 n y N9A C4A NAP sing 308 n y C8A N7A NAP doub 309 n y C8A H8A NAP sing 310 n n N7A C5A NAP sing 311 n y C5A C6A NAP sing 312 n y C5A C4A NAP doub 313 n y C6A N6A NAP sing 314 n n C6A N1A NAP doub 315 n y N6A H61A NAP sing 316 n n N6A H62A NAP sing 317 n n N1A C2A NAP sing 318 n y C2A N3A NAP doub 319 n y C2A H2A NAP sing 320 n n N3A C4A NAP sing 321 n y O3 PN NAP sing 322 n n PN O1N NAP doub 323 n n PN O2N NAP sing 324 n n PN O5D NAP sing 325 n n O5D C5D NAP sing 326 n n C5D C4D NAP sing 327 n n C5D H51N NAP sing 328 n n C5D H52N NAP sing 329 n n C4D O4D NAP sing 330 n n C4D C3D NAP sing 331 n n C4D H4D NAP sing 332 n n O4D C1D NAP sing 333 n n C3D O3D NAP sing 334 n n C3D C2D NAP sing 335 n n C3D H3D NAP sing 336 n n O3D HO3N NAP sing 337 n n C2D O2D NAP sing 338 n n C2D C1D NAP sing 339 n n C2D H2D NAP sing 340 n n O2D HO2N NAP sing 341 n n C1D N1N NAP sing 342 n n C1D H1D NAP sing 343 n n N1N C2N NAP sing 344 n y N1N C6N NAP doub 345 n y C2N C3N NAP doub 346 n y C2N H2N NAP sing 347 n n C3N C7N NAP sing 348 n n C3N C4N NAP sing 349 n y C7N O7N NAP doub 350 n n C7N N7N NAP sing 351 n n N7N H71N NAP sing 352 n n N7N H72N NAP sing 353 n n C4N C5N NAP doub 354 n y C4N H4N NAP sing 355 n n C5N C6N NAP sing 356 n y C5N H5N NAP sing 357 n n C6N H6N NAP sing 358 n n P2B O1X NAP doub 359 n n P2B O2X NAP sing 360 n n P2B O3X NAP sing 361 n n O2X HOP2 NAP sing 362 n n O3X HOP3 NAP sing 363 n n # _atom_sites.entry_id 1A27 _atom_sites.fract_transf_matrix[1][1] 0.008978 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004211 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020602 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018176 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EST A 1 350 350 EST EST . C 3 NAP A 1 360 360 NAP NAP . D 4 HOH A 1 501 501 HOH HOH . D 4 HOH A 2 502 502 HOH HOH . D 4 HOH A 3 503 503 HOH HOH . D 4 HOH A 4 504 504 HOH HOH . D 4 HOH A 5 505 505 HOH HOH . D 4 HOH A 6 506 506 HOH HOH . D 4 HOH A 7 507 507 HOH HOH . D 4 HOH A 8 508 508 HOH HOH . D 4 HOH A 9 509 509 HOH HOH . D 4 HOH A 10 510 510 HOH HOH . D 4 HOH A 11 511 511 HOH HOH . D 4 HOH A 12 512 512 HOH HOH . D 4 HOH A 13 513 513 HOH HOH . D 4 HOH A 14 514 514 HOH HOH . D 4 HOH A 15 515 515 HOH HOH . D 4 HOH A 16 516 516 HOH HOH . D 4 HOH A 17 517 517 HOH HOH . D 4 HOH A 18 518 518 HOH HOH . D 4 HOH A 19 519 519 HOH HOH . D 4 HOH A 20 520 520 HOH HOH . D 4 HOH A 21 521 521 HOH HOH . D 4 HOH A 22 522 522 HOH HOH . D 4 HOH A 23 523 523 HOH HOH . D 4 HOH A 24 524 524 HOH HOH . D 4 HOH A 25 525 525 HOH HOH . D 4 HOH A 26 526 526 HOH HOH . D 4 HOH A 27 527 527 HOH HOH . D 4 HOH A 28 528 528 HOH HOH . D 4 HOH A 29 529 529 HOH HOH . D 4 HOH A 30 530 530 HOH HOH . D 4 HOH A 31 531 531 HOH HOH . D 4 HOH A 32 532 532 HOH HOH . D 4 HOH A 33 533 533 HOH HOH . D 4 HOH A 34 534 534 HOH HOH . D 4 HOH A 35 535 535 HOH HOH . D 4 HOH A 36 536 536 HOH HOH . D 4 HOH A 37 537 537 HOH HOH . D 4 HOH A 38 538 538 HOH HOH . D 4 HOH A 39 539 539 HOH HOH . D 4 HOH A 40 540 540 HOH HOH . D 4 HOH A 41 541 541 HOH HOH . D 4 HOH A 42 542 542 HOH HOH . D 4 HOH A 43 543 543 HOH HOH . D 4 HOH A 44 544 544 HOH HOH . D 4 HOH A 45 545 545 HOH HOH . D 4 HOH A 46 546 546 HOH HOH . D 4 HOH A 47 547 547 HOH HOH . D 4 HOH A 48 548 548 HOH HOH . D 4 HOH A 49 549 549 HOH HOH . D 4 HOH A 50 550 550 HOH HOH . D 4 HOH A 51 551 551 HOH HOH . D 4 HOH A 52 552 552 HOH HOH . D 4 HOH A 53 553 553 HOH HOH . D 4 HOH A 54 554 554 HOH HOH . D 4 HOH A 55 555 555 HOH HOH . D 4 HOH A 56 556 556 HOH HOH . D 4 HOH A 57 557 557 HOH HOH . D 4 HOH A 58 558 558 HOH HOH . D 4 HOH A 59 559 559 HOH HOH . D 4 HOH A 60 560 560 HOH HOH . D 4 HOH A 61 561 561 HOH HOH . D 4 HOH A 62 562 562 HOH HOH . D 4 HOH A 63 563 563 HOH HOH . D 4 HOH A 64 564 564 HOH HOH . D 4 HOH A 65 565 565 HOH HOH . D 4 HOH A 66 566 566 HOH HOH . D 4 HOH A 67 567 567 HOH HOH . D 4 HOH A 68 568 568 HOH HOH . D 4 HOH A 69 569 569 HOH HOH . D 4 HOH A 70 570 570 HOH HOH . D 4 HOH A 71 571 571 HOH HOH . D 4 HOH A 72 572 572 HOH HOH . D 4 HOH A 73 573 573 HOH HOH . D 4 HOH A 74 574 574 HOH HOH . D 4 HOH A 75 575 575 HOH HOH . D 4 HOH A 76 576 576 HOH HOH . D 4 HOH A 77 577 577 HOH HOH . D 4 HOH A 78 578 578 HOH HOH . D 4 HOH A 79 579 579 HOH HOH . D 4 HOH A 80 580 580 HOH HOH . D 4 HOH A 81 581 581 HOH HOH . D 4 HOH A 82 582 582 HOH HOH . D 4 HOH A 83 583 583 HOH HOH . D 4 HOH A 84 584 584 HOH HOH . D 4 HOH A 85 585 585 HOH HOH . D 4 HOH A 86 586 586 HOH HOH . D 4 HOH A 87 587 587 HOH HOH . D 4 HOH A 88 588 588 HOH HOH . D 4 HOH A 89 589 589 HOH HOH . D 4 HOH A 90 590 590 HOH HOH . D 4 HOH A 91 591 591 HOH HOH . D 4 HOH A 92 592 592 HOH HOH . D 4 HOH A 93 593 593 HOH HOH . D 4 HOH A 94 594 594 HOH HOH . D 4 HOH A 95 595 595 HOH HOH . D 4 HOH A 96 596 596 HOH HOH . D 4 HOH A 97 597 597 HOH HOH . D 4 HOH A 98 598 598 HOH HOH . D 4 HOH A 99 599 599 HOH HOH . D 4 HOH A 100 600 600 HOH HOH . D 4 HOH A 101 601 601 HOH HOH . D 4 HOH A 102 602 602 HOH HOH . D 4 HOH A 103 603 603 HOH HOH . D 4 HOH A 104 604 604 HOH HOH . D 4 HOH A 105 605 605 HOH HOH . D 4 HOH A 106 606 606 HOH HOH . D 4 HOH A 107 607 607 HOH HOH . D 4 HOH A 108 608 608 HOH HOH . D 4 HOH A 109 609 609 HOH HOH . D 4 HOH A 110 610 610 HOH HOH . D 4 HOH A 111 611 611 HOH HOH . D 4 HOH A 112 612 612 HOH HOH . D 4 HOH A 113 613 613 HOH HOH . D 4 HOH A 114 614 614 HOH HOH . D 4 HOH A 115 615 615 HOH HOH . D 4 HOH A 116 616 616 HOH HOH . D 4 HOH A 117 617 617 HOH HOH . D 4 HOH A 118 618 618 HOH HOH . D 4 HOH A 119 619 619 HOH HOH . D 4 HOH A 120 620 620 HOH HOH . D 4 HOH A 121 621 621 HOH HOH . D 4 HOH A 122 622 622 HOH HOH . D 4 HOH A 123 623 623 HOH HOH . D 4 HOH A 124 624 624 HOH HOH . D 4 HOH A 125 625 625 HOH HOH . D 4 HOH A 126 626 626 HOH HOH . D 4 HOH A 127 627 627 HOH HOH . D 4 HOH A 128 628 628 HOH HOH . D 4 HOH A 129 629 629 HOH HOH . D 4 HOH A 130 630 630 HOH HOH . D 4 HOH A 131 631 631 HOH HOH . D 4 HOH A 132 632 632 HOH HOH . D 4 HOH A 133 633 633 HOH HOH . D 4 HOH A 134 634 634 HOH HOH . D 4 HOH A 135 635 635 HOH HOH . D 4 HOH A 136 636 636 HOH HOH . D 4 HOH A 137 637 637 HOH HOH . D 4 HOH A 138 638 638 HOH HOH . D 4 HOH A 139 639 639 HOH HOH . D 4 HOH A 140 640 640 HOH HOH . D 4 HOH A 141 641 641 HOH HOH . D 4 HOH A 142 642 642 HOH HOH . D 4 HOH A 143 643 643 HOH HOH . D 4 HOH A 144 644 644 HOH HOH . D 4 HOH A 145 645 645 HOH HOH . D 4 HOH A 146 646 646 HOH HOH . D 4 HOH A 147 647 647 HOH HOH . D 4 HOH A 148 648 648 HOH HOH . D 4 HOH A 149 649 649 HOH HOH . D 4 HOH A 150 650 650 HOH HOH . D 4 HOH A 151 651 651 HOH HOH . D 4 HOH A 152 652 652 HOH HOH . D 4 HOH A 153 653 653 HOH HOH . D 4 HOH A 154 654 654 HOH HOH . D 4 HOH A 155 655 655 HOH HOH . D 4 HOH A 156 656 656 HOH HOH . D 4 HOH A 157 657 657 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAP . . . C 3 19.809 -4.622 -0.132 1 39.82 ? PA NAP 360 A 1 HETATM 2 O O1A NAP . . . C 3 19.433 -5.695 -1.086 1 38.26 ? O1A NAP 360 A 1 HETATM 3 O O2A NAP . . . C 3 21.229 -4.178 -0.059 1 38.45 ? O2A NAP 360 A 1 HETATM 4 O O5B NAP . . . C 3 19.439 -4.994 1.401 1 39.66 ? O5B NAP 360 A 1 HETATM 5 C C5B NAP . . . C 3 18.155 -5.521 1.783 1 38.59 ? C5B NAP 360 A 1 HETATM 6 C C4B NAP . . . C 3 18.329 -6.562 2.863 1 37.11 ? C4B NAP 360 A 1 HETATM 7 O O4B NAP . . . C 3 17.029 -7.174 3.073 1 37.54 ? O4B NAP 360 A 1 HETATM 8 C C3B NAP . . . C 3 19.329 -7.703 2.578 1 37.27 ? C3B NAP 360 A 1 HETATM 9 O O3B NAP . . . C 3 20.076 -7.992 3.791 1 34.17 ? O3B NAP 360 A 1 HETATM 10 C C2B NAP . . . C 3 18.41 -8.894 2.283 1 38.59 ? C2B NAP 360 A 1 HETATM 11 O O2B NAP . . . C 3 19.046 -10.13 2.654 1 42.45 ? O2B NAP 360 A 1 HETATM 12 C C1B NAP . . . C 3 17.263 -8.55 3.266 1 37.22 ? C1B NAP 360 A 1 HETATM 13 N N9A NAP . . . C 3 16.11 -9.429 3.12 1 36.32 ? N9A NAP 360 A 1 HETATM 14 C C8A NAP . . . C 3 15.524 -9.79 1.97 1 34.64 ? C8A NAP 360 A 1 HETATM 15 N N7A NAP . . . C 3 14.611 -10.722 2.214 1 34.21 ? N7A NAP 360 A 1 HETATM 16 C C5A NAP . . . C 3 14.593 -10.934 3.518 1 34.4 ? C5A NAP 360 A 1 HETATM 17 C C6A NAP . . . C 3 13.858 -11.8 4.344 1 34.02 ? C6A NAP 360 A 1 HETATM 18 N N6A NAP . . . C 3 12.962 -12.615 3.75 1 32.93 ? N6A NAP 360 A 1 HETATM 19 N N1A NAP . . . C 3 14.114 -11.804 5.667 1 31.48 ? N1A NAP 360 A 1 HETATM 20 C C2A NAP . . . C 3 15.039 -11.026 6.188 1 33.16 ? C2A NAP 360 A 1 HETATM 21 N N3A NAP . . . C 3 15.767 -10.173 5.45 1 34.17 ? N3A NAP 360 A 1 HETATM 22 C C4A NAP . . . C 3 15.559 -10.133 4.117 1 35.56 ? C4A NAP 360 A 1 HETATM 23 O O3 NAP . . . C 3 18.886 -3.322 -0.387 1 37.42 ? O3 NAP 360 A 1 HETATM 24 P PN NAP . . . C 3 18.661 -2.011 0.553 1 38.76 ? PN NAP 360 A 1 HETATM 25 O O1N NAP . . . C 3 18.366 -0.809 -0.314 1 39.44 ? O1N NAP 360 A 1 HETATM 26 O O2N NAP . . . C 3 19.734 -1.884 1.522 1 37.09 ? O2N NAP 360 A 1 HETATM 27 O O5D NAP . . . C 3 17.28 -2.413 1.29 1 37.52 ? O5D NAP 360 A 1 HETATM 28 C C5D NAP . . . C 3 16.891 -1.949 2.589 1 37.57 ? C5D NAP 360 A 1 HETATM 29 C C4D NAP . . . C 3 15.523 -1.295 2.511 1 39.14 ? C4D NAP 360 A 1 HETATM 30 O O4D NAP . . . C 3 15.704 -0.037 1.828 1 38.29 ? O4D NAP 360 A 1 HETATM 31 C C3D NAP . . . C 3 14.356 -2.012 1.831 1 38.3 ? C3D NAP 360 A 1 HETATM 32 O O3D NAP . . . C 3 13.186 -2.154 2.676 1 37.32 ? O3D NAP 360 A 1 HETATM 33 C C2D NAP . . . C 3 13.961 -1.081 0.716 1 39.17 ? C2D NAP 360 A 1 HETATM 34 O O2D NAP . . . C 3 13.106 -1.551 -0.223 1 37.4 ? O2D NAP 360 A 1 HETATM 35 C C1D NAP . . . C 3 14.534 0.234 1.029 1 38.81 ? C1D NAP 360 A 1 HETATM 36 N N1N NAP . . . C 3 14.836 1.184 -0.066 1 39.56 ? N1N NAP 360 A 1 HETATM 37 C C2N NAP . . . C 3 15.928 0.994 -0.937 1 39.48 ? C2N NAP 360 A 1 HETATM 38 C C3N NAP . . . C 3 16.181 1.862 -2.007 1 39.92 ? C3N NAP 360 A 1 HETATM 39 C C7N NAP . . . C 3 17.371 1.585 -2.937 1 40.3 ? C7N NAP 360 A 1 HETATM 40 O O7N NAP . . . C 3 17.699 2.215 -3.923 1 37.51 ? O7N NAP 360 A 1 HETATM 41 N N7N NAP . . . C 3 18.092 0.505 -2.581 1 42.22 ? N7N NAP 360 A 1 HETATM 42 C C4N NAP . . . C 3 15.345 2.967 -2.179 1 39.16 ? C4N NAP 360 A 1 HETATM 43 C C5N NAP . . . C 3 14.292 3.198 -1.289 1 40.57 ? C5N NAP 360 A 1 HETATM 44 C C6N NAP . . . C 3 14.003 2.306 -0.237 1 40.48 ? C6N NAP 360 A 1 HETATM 45 P P2B NAP . . . C 3 19.501 -11.023 1.624 1 46.86 ? P2B NAP 360 A 1 HETATM 46 O O1X NAP . . . C 3 20.623 -10.411 0.988 1 47.57 ? O1X NAP 360 A 1 HETATM 47 O O2X NAP . . . C 3 19.915 -12.31 2.114 1 45.82 ? O2X NAP 360 A 1 HETATM 48 O O3X NAP . . . C 3 18.491 -11.287 0.632 1 47.19 ? O3X NAP 360 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 48 #