data_1A28 # _model_server_result.job_id zNRFv3M0GmonEN7j2eXBwA _model_server_result.datetime_utc '2024-11-28 02:23:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1a28 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 1A28 # _exptl.entry_id 1A28 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 314.462 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PROGESTERONE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.74 _cell.angle_gamma 90 _cell.entry_id 1A28 _cell.length_a 58.123 _cell.length_b 64.444 _cell.length_c 69.954 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1A28 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog ? hydrog1 C O3 STR . A STR 1 1_555 A NE2 GLN 48 A GLN 725 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog ? hydrog2 D O3 STR . B STR 2 1_555 B NE2 GLN 48 B GLN 725 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C21 H30 O2' _chem_comp.formula_weight 314.462 _chem_comp.id STR _chem_comp.mon_nstd_flag . _chem_comp.name PROGESTERONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 STR sing 290 n n C1 C10 STR sing 291 n n C1 H11 STR sing 292 n n C1 H12 STR sing 293 n n C2 C3 STR sing 294 n n C2 H21 STR sing 295 n n C2 H22 STR sing 296 n n C3 O3 STR doub 297 n n C3 C4 STR sing 298 n n C4 C5 STR doub 299 n n C4 H4 STR sing 300 n n C5 C6 STR sing 301 n n C5 C10 STR sing 302 n n C6 C7 STR sing 303 n n C6 H61 STR sing 304 n n C6 H62 STR sing 305 n n C7 C8 STR sing 306 n n C7 H71 STR sing 307 n n C7 H72 STR sing 308 n n C8 C9 STR sing 309 n n C8 C14 STR sing 310 n n C8 H8 STR sing 311 n n C9 C10 STR sing 312 n n C9 C11 STR sing 313 n n C9 H9 STR sing 314 n n C10 C19 STR sing 315 n n C11 C12 STR sing 316 n n C11 H111 STR sing 317 n n C11 H112 STR sing 318 n n C12 C13 STR sing 319 n n C12 H121 STR sing 320 n n C12 H122 STR sing 321 n n C13 C14 STR sing 322 n n C13 C17 STR sing 323 n n C13 C18 STR sing 324 n n C14 C15 STR sing 325 n n C14 H14 STR sing 326 n n C15 C16 STR sing 327 n n C15 H151 STR sing 328 n n C15 H152 STR sing 329 n n C16 C17 STR sing 330 n n C16 H161 STR sing 331 n n C16 H162 STR sing 332 n n C17 C20 STR sing 333 n n C17 H17 STR sing 334 n n C18 H181 STR sing 335 n n C18 H182 STR sing 336 n n C18 H183 STR sing 337 n n C19 H191 STR sing 338 n n C19 H192 STR sing 339 n n C19 H193 STR sing 340 n n C20 O20 STR doub 341 n n C20 C21 STR sing 342 n n C21 H211 STR sing 343 n n C21 H212 STR sing 344 n n C21 H213 STR sing 345 n n # _atom_sites.entry_id 1A28 _atom_sites.fract_transf_matrix[1][1] 0.017205 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001729 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015517 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014367 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 STR A 1 1 1 STR STR . D 2 STR B 1 2 2 STR STR . E 3 HOH A 1 1000 1000 HOH HOH . E 3 HOH A 2 1001 1001 HOH HOH . E 3 HOH A 3 1002 1002 HOH HOH . E 3 HOH A 4 1003 1003 HOH HOH . E 3 HOH A 5 1004 1004 HOH HOH . E 3 HOH A 6 1007 1007 HOH HOH . E 3 HOH A 7 1010 1010 HOH HOH . E 3 HOH A 8 1014 1014 HOH HOH . E 3 HOH A 9 1017 1017 HOH HOH . E 3 HOH A 10 1018 1018 HOH HOH . E 3 HOH A 11 1021 1021 HOH HOH . E 3 HOH A 12 1027 1027 HOH HOH . E 3 HOH A 13 1028 1028 HOH HOH . E 3 HOH A 14 1029 1029 HOH HOH . E 3 HOH A 15 1030 1030 HOH HOH . E 3 HOH A 16 1032 1032 HOH HOH . E 3 HOH A 17 1033 1033 HOH HOH . E 3 HOH A 18 1037 1037 HOH HOH . E 3 HOH A 19 1040 1040 HOH HOH . E 3 HOH A 20 1042 1042 HOH HOH . E 3 HOH A 21 1043 1043 HOH HOH . E 3 HOH A 22 1044 1044 HOH HOH . E 3 HOH A 23 1046 1046 HOH HOH . E 3 HOH A 24 1048 1048 HOH HOH . E 3 HOH A 25 1050 1050 HOH HOH . E 3 HOH A 26 1054 1054 HOH HOH . E 3 HOH A 27 1055 1055 HOH HOH . E 3 HOH A 28 1058 1058 HOH HOH . E 3 HOH A 29 1062 1062 HOH HOH . E 3 HOH A 30 1065 1065 HOH HOH . E 3 HOH A 31 1067 1067 HOH HOH . E 3 HOH A 32 1070 1070 HOH HOH . E 3 HOH A 33 1071 1071 HOH HOH . E 3 HOH A 34 1078 1078 HOH HOH . E 3 HOH A 35 1079 1079 HOH HOH . E 3 HOH A 36 1080 1080 HOH HOH . E 3 HOH A 37 1083 1083 HOH HOH . E 3 HOH A 38 1084 1084 HOH HOH . E 3 HOH A 39 1085 1085 HOH HOH . E 3 HOH A 40 1086 1086 HOH HOH . E 3 HOH A 41 1088 1088 HOH HOH . E 3 HOH A 42 1089 1089 HOH HOH . E 3 HOH A 43 1090 1090 HOH HOH . E 3 HOH A 44 1091 1091 HOH HOH . E 3 HOH A 45 1100 1100 HOH HOH . E 3 HOH A 46 1105 1105 HOH HOH . E 3 HOH A 47 1106 1106 HOH HOH . E 3 HOH A 48 1107 1107 HOH HOH . E 3 HOH A 49 1108 1108 HOH HOH . E 3 HOH A 50 1110 1110 HOH HOH . E 3 HOH A 51 1113 1113 HOH HOH . E 3 HOH A 52 1115 1115 HOH HOH . E 3 HOH A 53 1118 1118 HOH HOH . E 3 HOH A 54 1120 1120 HOH HOH . E 3 HOH A 55 1121 1121 HOH HOH . E 3 HOH A 56 1122 1122 HOH HOH . E 3 HOH A 57 1124 1124 HOH HOH . E 3 HOH A 58 1125 1125 HOH HOH . E 3 HOH A 59 1126 1126 HOH HOH . E 3 HOH A 60 1127 1127 HOH HOH . E 3 HOH A 61 1129 1129 HOH HOH . E 3 HOH A 62 1130 1130 HOH HOH . E 3 HOH A 63 1132 1132 HOH HOH . E 3 HOH A 64 1134 1134 HOH HOH . E 3 HOH A 65 1135 1135 HOH HOH . E 3 HOH A 66 1136 1136 HOH HOH . E 3 HOH A 67 1139 1139 HOH HOH . E 3 HOH A 68 1140 1140 HOH HOH . E 3 HOH A 69 1141 1141 HOH HOH . E 3 HOH A 70 1142 1142 HOH HOH . E 3 HOH A 71 1147 1147 HOH HOH . E 3 HOH A 72 1149 1149 HOH HOH . E 3 HOH A 73 1151 1151 HOH HOH . E 3 HOH A 74 1152 1152 HOH HOH . E 3 HOH A 75 1153 1153 HOH HOH . E 3 HOH A 76 1161 1161 HOH HOH . E 3 HOH A 77 1163 1163 HOH HOH . E 3 HOH A 78 1166 1166 HOH HOH . E 3 HOH A 79 1167 1167 HOH HOH . E 3 HOH A 80 1168 1168 HOH HOH . E 3 HOH A 81 1170 1170 HOH HOH . E 3 HOH A 82 1175 1175 HOH HOH . E 3 HOH A 83 1176 1176 HOH HOH . E 3 HOH A 84 1177 1177 HOH HOH . E 3 HOH A 85 1178 1178 HOH HOH . E 3 HOH A 86 1179 1179 HOH HOH . F 3 HOH B 1 1005 1005 HOH HOH . F 3 HOH B 2 1006 1006 HOH HOH . F 3 HOH B 3 1008 1008 HOH HOH . F 3 HOH B 4 1009 1009 HOH HOH . F 3 HOH B 5 1011 1011 HOH HOH . F 3 HOH B 6 1012 1012 HOH HOH . F 3 HOH B 7 1013 1013 HOH HOH . F 3 HOH B 8 1015 1015 HOH HOH . F 3 HOH B 9 1016 1016 HOH HOH . F 3 HOH B 10 1019 1019 HOH HOH . F 3 HOH B 11 1020 1020 HOH HOH . F 3 HOH B 12 1022 1022 HOH HOH . F 3 HOH B 13 1023 1023 HOH HOH . F 3 HOH B 14 1024 1024 HOH HOH . F 3 HOH B 15 1025 1025 HOH HOH . F 3 HOH B 16 1026 1026 HOH HOH . F 3 HOH B 17 1031 1031 HOH HOH . F 3 HOH B 18 1034 1034 HOH HOH . F 3 HOH B 19 1035 1035 HOH HOH . F 3 HOH B 20 1036 1036 HOH HOH . F 3 HOH B 21 1038 1038 HOH HOH . F 3 HOH B 22 1039 1039 HOH HOH . F 3 HOH B 23 1041 1041 HOH HOH . F 3 HOH B 24 1045 1045 HOH HOH . F 3 HOH B 25 1047 1047 HOH HOH . F 3 HOH B 26 1049 1049 HOH HOH . F 3 HOH B 27 1051 1051 HOH HOH . F 3 HOH B 28 1052 1052 HOH HOH . F 3 HOH B 29 1053 1053 HOH HOH . F 3 HOH B 30 1056 1056 HOH HOH . F 3 HOH B 31 1057 1057 HOH HOH . F 3 HOH B 32 1059 1059 HOH HOH . F 3 HOH B 33 1060 1060 HOH HOH . F 3 HOH B 34 1061 1061 HOH HOH . F 3 HOH B 35 1063 1063 HOH HOH . F 3 HOH B 36 1064 1064 HOH HOH . F 3 HOH B 37 1066 1066 HOH HOH . F 3 HOH B 38 1068 1068 HOH HOH . F 3 HOH B 39 1069 1069 HOH HOH . F 3 HOH B 40 1072 1072 HOH HOH . F 3 HOH B 41 1073 1073 HOH HOH . F 3 HOH B 42 1074 1074 HOH HOH . F 3 HOH B 43 1075 1075 HOH HOH . F 3 HOH B 44 1076 1076 HOH HOH . F 3 HOH B 45 1077 1077 HOH HOH . F 3 HOH B 46 1081 1081 HOH HOH . F 3 HOH B 47 1082 1082 HOH HOH . F 3 HOH B 48 1087 1087 HOH HOH . F 3 HOH B 49 1092 1092 HOH HOH . F 3 HOH B 50 1093 1093 HOH HOH . F 3 HOH B 51 1094 1094 HOH HOH . F 3 HOH B 52 1095 1095 HOH HOH . F 3 HOH B 53 1096 1096 HOH HOH . F 3 HOH B 54 1097 1097 HOH HOH . F 3 HOH B 55 1098 1098 HOH HOH . F 3 HOH B 56 1099 1099 HOH HOH . F 3 HOH B 57 1101 1101 HOH HOH . F 3 HOH B 58 1102 1102 HOH HOH . F 3 HOH B 59 1103 1103 HOH HOH . F 3 HOH B 60 1104 1104 HOH HOH . F 3 HOH B 61 1109 1109 HOH HOH . F 3 HOH B 62 1111 1111 HOH HOH . F 3 HOH B 63 1112 1112 HOH HOH . F 3 HOH B 64 1114 1114 HOH HOH . F 3 HOH B 65 1116 1116 HOH HOH . F 3 HOH B 66 1117 1117 HOH HOH . F 3 HOH B 67 1119 1119 HOH HOH . F 3 HOH B 68 1123 1123 HOH HOH . F 3 HOH B 69 1128 1128 HOH HOH . F 3 HOH B 70 1131 1131 HOH HOH . F 3 HOH B 71 1133 1133 HOH HOH . F 3 HOH B 72 1137 1137 HOH HOH . F 3 HOH B 73 1138 1138 HOH HOH . F 3 HOH B 74 1143 1143 HOH HOH . F 3 HOH B 75 1144 1144 HOH HOH . F 3 HOH B 76 1145 1145 HOH HOH . F 3 HOH B 77 1146 1146 HOH HOH . F 3 HOH B 78 1148 1148 HOH HOH . F 3 HOH B 79 1150 1150 HOH HOH . F 3 HOH B 80 1154 1154 HOH HOH . F 3 HOH B 81 1155 1155 HOH HOH . F 3 HOH B 82 1156 1156 HOH HOH . F 3 HOH B 83 1157 1157 HOH HOH . F 3 HOH B 84 1158 1158 HOH HOH . F 3 HOH B 85 1159 1159 HOH HOH . F 3 HOH B 86 1160 1160 HOH HOH . F 3 HOH B 87 1162 1162 HOH HOH . F 3 HOH B 88 1164 1164 HOH HOH . F 3 HOH B 89 1165 1165 HOH HOH . F 3 HOH B 90 1169 1169 HOH HOH . F 3 HOH B 91 1171 1171 HOH HOH . F 3 HOH B 92 1172 1172 HOH HOH . F 3 HOH B 93 1173 1173 HOH HOH . F 3 HOH B 94 1174 1174 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 STR . . . C 2 21.206 9.935 63.081 1 24.82 ? C1 STR 1 A 1 HETATM 2 C C2 STR . . . C 2 21.241 9.446 64.551 1 23.75 ? C2 STR 1 A 1 HETATM 3 C C3 STR . . . C 2 22 8.125 64.63 1 25.95 ? C3 STR 1 A 1 HETATM 4 O O3 STR . . . C 2 21.701 7.301 65.512 1 31.79 ? O3 STR 1 A 1 HETATM 5 C C4 STR . . . C 2 23.118 7.872 63.734 1 21.13 ? C4 STR 1 A 1 HETATM 6 C C5 STR . . . C 2 23.453 8.727 62.785 1 20.44 ? C5 STR 1 A 1 HETATM 7 C C6 STR . . . C 2 24.697 8.443 61.951 1 23.35 ? C6 STR 1 A 1 HETATM 8 C C7 STR . . . C 2 24.449 8.637 60.443 1 28.93 ? C7 STR 1 A 1 HETATM 9 C C8 STR . . . C 2 23.789 9.997 60.098 1 21.68 ? C8 STR 1 A 1 HETATM 10 C C9 STR . . . C 2 22.434 10.095 60.872 1 20.21 ? C9 STR 1 A 1 HETATM 11 C C10 STR . . . C 2 22.614 10.023 62.434 1 19.15 ? C10 STR 1 A 1 HETATM 12 C C11 STR . . . C 2 21.633 11.354 60.45 1 20.97 ? C11 STR 1 A 1 HETATM 13 C C12 STR . . . C 2 21.432 11.434 58.911 1 21.57 ? C12 STR 1 A 1 HETATM 14 C C13 STR . . . C 2 22.786 11.404 58.169 1 21.81 ? C13 STR 1 A 1 HETATM 15 C C14 STR . . . C 2 23.483 10.06 58.598 1 21.81 ? C14 STR 1 A 1 HETATM 16 C C15 STR . . . C 2 24.674 9.918 57.618 1 26.96 ? C15 STR 1 A 1 HETATM 17 C C16 STR . . . C 2 24.072 10.45 56.267 1 31.06 ? C16 STR 1 A 1 HETATM 18 C C17 STR . . . C 2 22.714 11.149 56.627 1 22.28 ? C17 STR 1 A 1 HETATM 19 C C18 STR . . . C 2 23.659 12.677 58.454 1 20.57 ? C18 STR 1 A 1 HETATM 20 C C19 STR . . . C 2 23.427 11.246 63.007 1 21.41 ? C19 STR 1 A 1 HETATM 21 C C20 STR . . . C 2 22.375 12.388 55.781 1 25.07 ? C20 STR 1 A 1 HETATM 22 O O20 STR . . . C 2 23.212 12.876 55.052 1 29.48 ? O20 STR 1 A 1 HETATM 23 C C21 STR . . . C 2 21.009 12.976 55.857 1 25.63 ? C21 STR 1 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 23 #