data_1A2E # _model_server_result.job_id 7MtL6MuYRMn5RGdhqO6voQ _model_server_result.datetime_utc '2024-11-09 02:32:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1a2e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":101}' # _entry.id 1A2E # _exptl.entry_id 1A2E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 300.045 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Cisplatin _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.98 _cell.angle_gamma 90 _cell.entry_id 1A2E _cell.length_a 42.89 _cell.length_b 29.98 _cell.length_c 46.57 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1A2E _symmetry.cell_setting monoclinic _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A N7 DG 5 A DG 5 1_555 C PT1 CPT . A CPT 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc2 C PT1 CPT . A CPT 101 1_555 B N7 DG 5 B DG 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? hydrog WATSON-CRICK hydrog1 A N3 DC 1 A DC 1 1_555 B N1 DG 10 B DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N4 DC 1 A DC 1 1_555 B O6 DG 10 B DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O2 DC 1 A DC 1 1_555 B N2 DG 10 B DG 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N3 DC 2 A DC 2 1_555 B N1 DG 9 B DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N4 DC 2 A DC 2 1_555 B O6 DG 9 B DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O2 DC 2 A DC 2 1_555 B N2 DG 9 B DG 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N3 DT 3 A DT 3 1_555 B N1 DA 8 B DA 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A O4 DT 3 A DT 3 1_555 B N6 DA 8 B DA 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N3 DC 4 A DC 4 1_555 B N1 DG 7 B DG 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N4 DC 4 A DC 4 1_555 B O6 DG 7 B DG 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A O2 DC 4 A DC 4 1_555 B N2 DG 7 B DG 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N3 DT 7 A DT 7 1_555 B N1 DA 4 B DA 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A O4 DT 7 A DT 7 1_555 B N6 DA 4 B DA 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N3 DC 8 A DC 8 1_555 B N1 DG 3 B DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N4 DC 8 A DC 8 1_555 B O6 DG 3 B DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A O2 DC 8 A DC 8 1_555 B N2 DG 3 B DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N3 DT 9 A DT 9 1_555 B N1 DA 2 B DA 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A O4 DT 9 A DT 9 1_555 B N6 DA 2 B DA 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N3 DC 10 A DC 10 1_555 B N1 DG 1 B DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A N4 DC 10 A DC 10 1_555 B O6 DG 1 B DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A O2 DC 10 A DC 10 1_555 B N2 DG 1 B DG 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Cl2 H6 N2 Pt' _chem_comp.formula_weight 300.045 _chem_comp.id CPT _chem_comp.mon_nstd_flag . _chem_comp.name Cisplatin _chem_comp.type non-polymer _chem_comp.pdbx_synonyms diammine(dichloro)platinum # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PT1 N1 CPT sing 1 n n PT1 N2 CPT sing 2 n n N1 H11 CPT sing 3 n n N1 H12 CPT sing 4 n n N1 H13 CPT sing 5 n n N2 H21 CPT sing 6 n n N2 H22 CPT sing 7 n n N2 H23 CPT sing 8 n n CL2 PT1 CPT sing 9 n n CL1 PT1 CPT sing 10 n n # _atom_sites.entry_id 1A2E _atom_sites.fract_transf_matrix[1][1] 0.023315 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002442 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.033356 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021591 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CPT A 1 101 101 CPT CPT . D 4 HOH A 1 102 1 HOH HOH . D 4 HOH A 2 103 2 HOH HOH . D 4 HOH A 3 104 5 HOH HOH . D 4 HOH A 4 105 7 HOH HOH . D 4 HOH A 5 106 9 HOH HOH . D 4 HOH A 6 107 10 HOH HOH . D 4 HOH A 7 108 11 HOH HOH . D 4 HOH A 8 109 15 HOH HOH . D 4 HOH A 9 110 16 HOH HOH . D 4 HOH A 10 111 17 HOH HOH . D 4 HOH A 11 112 20 HOH HOH . D 4 HOH A 12 113 21 HOH HOH . D 4 HOH A 13 114 22 HOH HOH . D 4 HOH A 14 115 23 HOH HOH . D 4 HOH A 15 116 24 HOH HOH . D 4 HOH A 16 117 29 HOH HOH . D 4 HOH A 17 118 30 HOH HOH . D 4 HOH A 18 119 31 HOH HOH . D 4 HOH A 19 120 33 HOH HOH . D 4 HOH A 20 121 36 HOH HOH . D 4 HOH A 21 122 37 HOH HOH . D 4 HOH A 22 123 41 HOH HOH . D 4 HOH A 23 124 42 HOH HOH . D 4 HOH A 24 125 43 HOH HOH . D 4 HOH A 25 126 45 HOH HOH . D 4 HOH A 26 127 48 HOH HOH . D 4 HOH A 27 128 49 HOH HOH . D 4 HOH A 28 129 53 HOH HOH . D 4 HOH A 29 130 56 HOH HOH . D 4 HOH A 30 131 58 HOH HOH . D 4 HOH A 31 132 59 HOH HOH . D 4 HOH A 32 133 61 HOH HOH . D 4 HOH A 33 134 63 HOH HOH . D 4 HOH A 34 135 69 HOH HOH . D 4 HOH A 35 136 71 HOH HOH . D 4 HOH A 36 137 72 HOH HOH . D 4 HOH A 37 138 73 HOH HOH . D 4 HOH A 38 139 75 HOH HOH . D 4 HOH A 39 140 76 HOH HOH . D 4 HOH A 40 141 78 HOH HOH . D 4 HOH A 41 142 79 HOH HOH . D 4 HOH A 42 143 80 HOH HOH . D 4 HOH A 43 144 81 HOH HOH . D 4 HOH A 44 145 82 HOH HOH . D 4 HOH A 45 146 84 HOH HOH . D 4 HOH A 46 147 85 HOH HOH . D 4 HOH A 47 148 86 HOH HOH . D 4 HOH A 48 149 88 HOH HOH . D 4 HOH A 49 150 89 HOH HOH . D 4 HOH A 50 151 90 HOH HOH . E 4 HOH B 1 21 3 HOH HOH . E 4 HOH B 2 22 4 HOH HOH . E 4 HOH B 3 23 6 HOH HOH . E 4 HOH B 4 24 8 HOH HOH . E 4 HOH B 5 25 12 HOH HOH . E 4 HOH B 6 26 13 HOH HOH . E 4 HOH B 7 27 14 HOH HOH . E 4 HOH B 8 28 18 HOH HOH . E 4 HOH B 9 29 19 HOH HOH . E 4 HOH B 10 30 25 HOH HOH . E 4 HOH B 11 31 26 HOH HOH . E 4 HOH B 12 32 27 HOH HOH . E 4 HOH B 13 33 28 HOH HOH . E 4 HOH B 14 34 32 HOH HOH . E 4 HOH B 15 35 34 HOH HOH . E 4 HOH B 16 36 35 HOH HOH . E 4 HOH B 17 37 38 HOH HOH . E 4 HOH B 18 38 39 HOH HOH . E 4 HOH B 19 39 40 HOH HOH . E 4 HOH B 20 40 44 HOH HOH . E 4 HOH B 21 41 46 HOH HOH . E 4 HOH B 22 42 47 HOH HOH . E 4 HOH B 23 43 50 HOH HOH . E 4 HOH B 24 44 51 HOH HOH . E 4 HOH B 25 45 52 HOH HOH . E 4 HOH B 26 46 54 HOH HOH . E 4 HOH B 27 47 55 HOH HOH . E 4 HOH B 28 48 57 HOH HOH . E 4 HOH B 29 49 60 HOH HOH . E 4 HOH B 30 50 62 HOH HOH . E 4 HOH B 31 51 64 HOH HOH . E 4 HOH B 32 52 65 HOH HOH . E 4 HOH B 33 53 66 HOH HOH . E 4 HOH B 34 54 67 HOH HOH . E 4 HOH B 35 55 68 HOH HOH . E 4 HOH B 36 56 70 HOH HOH . E 4 HOH B 37 57 74 HOH HOH . E 4 HOH B 38 58 77 HOH HOH . E 4 HOH B 39 59 83 HOH HOH . E 4 HOH B 40 60 87 HOH HOH . E 4 HOH B 41 61 91 HOH HOH . E 4 HOH B 42 62 92 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 PT PT1 CPT . . . C 3 9.157 7.362 35.129 1 12.86 ? PT1 CPT 101 A 1 HETATM 2 N N1 CPT . . . C 3 9.603 6.346 33.453 1 15.92 ? N1 CPT 101 A 1 HETATM 3 N N2 CPT . . . C 3 7.233 7.331 34.594 1 14.28 ? N2 CPT 101 A 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 3 #