data_1A3X # _model_server_result.job_id 0ZGAqEeaJl64RnWr80a9Pw _model_server_result.datetime_utc '2024-11-05 00:34:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1a3x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1004}' # _entry.id 1A3X # _exptl.entry_id 1A3X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 39.098 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'POTASSIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.8 _cell.angle_gamma 90 _cell.entry_id 1A3X _cell.length_a 108.3 _cell.length_b 106.4 _cell.length_c 105.5 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1A3X _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E 1 1,2 B,F,G,H 1 3,4 A,C,D,E 2 1 B,F,G,H 2 3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 70.836215 0 98.624109 3 'crystal symmetry operation' 1_545 x,y-1,z 1 0 0 0 1 0 0 0 1 0 -106.4 0 4 'crystal symmetry operation' 2_646 -x+1,y-1,-z+1 -1 0 0 0 1 0 0 0 -1 70.836215 -106.4 98.624109 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A CA ALA 263 A ALA 263 1_555 C O2 PGA . A PGA 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc1 A OD1 ASN 51 A ASN 51 1_555 E K K . A K 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.775 ? metalc ? metalc2 A OG SER 53 A SER 53 1_555 E K K . A K 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.392 ? metalc ? metalc3 A OD1 ASP 84 A ASP 84 1_555 E K K . A K 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.791 ? metalc ? metalc4 A O ASP 84 A ASP 84 1_555 E K K . A K 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.53 ? metalc ? metalc5 A O THR 85 A THR 85 1_555 E K K . A K 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.912 ? metalc ? metalc6 A OG SER 213 A SER 213 1_555 E K K . A K 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.226 ? metalc ? metalc7 A NZ LYS 240 A LYS 240 1_555 E K K . A K 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.383 ? metalc ? metalc8 A OE1 GLU 242 A GLU 242 1_555 D MN MN . A MN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc9 A OD1 ASP 266 A ASP 266 1_555 D MN MN . A MN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc10 D MN MN . A MN 1001 1_555 C O4P PGA . A PGA 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc11 D MN MN . A MN 1001 1_555 C O1P PGA . A PGA 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc12 E K K . A K 1002 1_555 C O3P PGA . A PGA 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.806 ? metalc ? metalc13 B OD1 ASN 51 B ASN 51 1_555 H K K . B K 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc14 B OG SER 53 B SER 53 1_555 H K K . B K 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.026 ? metalc ? metalc15 B OD1 ASP 84 B ASP 84 1_555 H K K . B K 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.904 ? metalc ? metalc16 B O ASP 84 B ASP 84 1_555 H K K . B K 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.502 ? metalc ? metalc17 B O THR 85 B THR 85 1_555 H K K . B K 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.026 ? metalc ? metalc18 B OG SER 213 B SER 213 1_555 H K K . B K 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.67 ? metalc ? metalc19 B NZ LYS 240 B LYS 240 1_555 H K K . B K 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.705 ? metalc ? metalc20 B OE1 GLU 242 B GLU 242 1_555 G MN MN . B MN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc21 B OD1 ASP 266 B ASP 266 1_555 G MN MN . B MN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.905 ? metalc ? metalc22 G MN MN . B MN 1003 1_555 F O4P PGA . B PGA 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.774 ? metalc ? metalc23 G MN MN . B MN 1003 1_555 F O1P PGA . B PGA 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc24 H K K . B K 1004 1_555 F O3P PGA . B PGA 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.944 ? # _chem_comp.formula 'K 1' _chem_comp.formula_weight 39.098 _chem_comp.id K _chem_comp.mon_nstd_flag . _chem_comp.name 'POTASSIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1A3X _atom_sites.fract_transf_matrix[1][1] 0.009234 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003508 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009398 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01014 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PGA A 1 1005 1005 PGA PGA . D 3 MN A 1 1001 1001 MN MN . E 4 K A 1 1002 1002 K K . F 2 PGA B 1 1006 1006 PGA PGA . G 3 MN B 1 1003 1003 MN MN . H 4 K B 1 1004 1004 K K . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol K _atom_site.label_atom_id K _atom_site.label_comp_id K _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 4 _atom_site.Cartn_x 5.066 _atom_site.Cartn_y 76.312 _atom_site.Cartn_z 21.166 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id K _atom_site.auth_comp_id K _atom_site.auth_seq_id 1004 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 350 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #