data_1A52 # _model_server_result.job_id Wz44AU_CFCwZiaPRbBm-tw _model_server_result.datetime_utc '2024-10-12 05:25:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1a52 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":15}' # _entry.id 1A52 # _exptl.entry_id 1A52 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 196.967 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'GOLD ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1A52 _cell.length_a 147 _cell.length_b 147 _cell.length_c 168.9 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1A52 _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 PISA tetrameric 4 software_defined_assembly 3 PISA dimeric 2 software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L 1 1 A,B,C,D,E,F,G,H,I,J,K,L 2 1,2 A,C,D,E,F,K 3 1,3 B,G,H,I,J,L 3 2,4 A,C,D,E,F,K 4 1 B,G,H,I,J,L 4 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_556 x-y,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 168.9 3 'crystal symmetry operation' 10_546 y+2/3,x-2/3,-z+4/3 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 147 -84.87049 225.2 4 'crystal symmetry operation' 8_545 -y+2/3,x-y-2/3,z+1/3 -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 147 -84.87049 56.3 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 H N N ? 3 I N N ? 3 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D AU AU . A AU 2 1_555 A NE2 HIS 180 A HIS 476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc2 H AU AU . B AU 12 1_555 B NE2 HIS 180 B HIS 476 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? # _chem_comp.formula 'Au 1' _chem_comp.formula_weight 196.967 _chem_comp.id AU _chem_comp.mon_nstd_flag . _chem_comp.name 'GOLD ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1A52 _atom_sites.fract_transf_matrix[1][1] 0.006803 _atom_sites.fract_transf_matrix[1][2] 0.003928 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007855 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005921 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EST A 1 1 1 EST EST . D 3 AU A 1 2 2 AU AU . E 3 AU A 1 3 3 AU AU . F 3 AU A 1 5 5 AU AU . G 2 EST B 1 2 2 EST EST . H 3 AU B 1 12 12 AU AU . I 3 AU B 1 13 13 AU AU . J 3 AU B 1 15 15 AU AU . K 4 HOH A 1 555 3 HOH HOH . K 4 HOH A 2 556 6 HOH HOH . K 4 HOH A 3 557 8 HOH HOH . K 4 HOH A 4 558 13 HOH HOH . K 4 HOH A 5 559 24 HOH HOH . K 4 HOH A 6 560 27 HOH HOH . K 4 HOH A 7 561 31 HOH HOH . K 4 HOH A 8 562 38 HOH HOH . K 4 HOH A 9 563 45 HOH HOH . K 4 HOH A 10 564 50 HOH HOH . L 4 HOH B 1 4 4 HOH HOH . L 4 HOH B 2 10 10 HOH HOH . L 4 HOH B 3 17 17 HOH HOH . L 4 HOH B 4 18 18 HOH HOH . L 4 HOH B 5 19 19 HOH HOH . L 4 HOH B 6 20 20 HOH HOH . L 4 HOH B 7 21 21 HOH HOH . L 4 HOH B 8 23 23 HOH HOH . L 4 HOH B 9 25 25 HOH HOH . L 4 HOH B 10 28 28 HOH HOH . L 4 HOH B 11 35 35 HOH HOH . L 4 HOH B 12 39 39 HOH HOH . L 4 HOH B 13 40 40 HOH HOH . L 4 HOH B 14 41 41 HOH HOH . L 4 HOH B 15 42 42 HOH HOH . L 4 HOH B 16 43 43 HOH HOH . L 4 HOH B 17 44 44 HOH HOH . L 4 HOH B 18 46 46 HOH HOH . L 4 HOH B 19 49 49 HOH HOH . L 4 HOH B 20 51 51 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol AU _atom_site.label_atom_id AU _atom_site.label_comp_id AU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 3 _atom_site.Cartn_x 77.619 _atom_site.Cartn_y 3.183 _atom_site.Cartn_z 73.966 _atom_site.occupancy 0.17 _atom_site.B_iso_or_equiv 85.26 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id AU _atom_site.auth_comp_id AU _atom_site.auth_seq_id 15 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #