data_1A5N # _model_server_result.job_id fcENOoY5f1O4G06MargKFQ _model_server_result.datetime_utc '2024-12-22 06:13:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1a5n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":575}' # _entry.id 1A5N # _exptl.entry_id 1A5N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.693 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NICKEL (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1A5N _cell.length_a 170.8 _cell.length_b 170.8 _cell.length_c 170.8 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1A5N _symmetry.cell_setting ? _symmetry.Int_Tables_number 199 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 21 3' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details nonameric _pdbx_struct_assembly.oligomeric_count 9 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C NE2 HIS 133 C HIS 134 1_555 E NI NI . C NI 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc2 C NE2 HIS 135 C HIS 136 1_555 E NI NI . C NI 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc3 C ND1 HIS 245 C HIS 246 1_555 D NI NI . C NI 574 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.533 ? metalc ? metalc4 C NE2 HIS 271 C HIS 272 1_555 D NI NI . C NI 574 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? metalc ? metalc5 C OD1 ASP 359 C ASP 360 1_555 E NI NI . C NI 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc6 D NI NI . C NI 574 1_555 F O1 FMT . C FMT 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.543 ? metalc ? metalc7 E NI NI . C NI 575 1_555 F O2 FMT . C FMT 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc8 E NI NI . C NI 575 1_555 I O HOH . C HOH 1147 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.862 ? # _chem_comp.formula 'Ni 2' _chem_comp.formula_weight 58.693 _chem_comp.id NI _chem_comp.mon_nstd_flag . _chem_comp.name 'NICKEL (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1A5N _atom_sites.fract_transf_matrix[1][1] 0.005855 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005855 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005855 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NI C 1 574 574 NI NI . E 4 NI C 1 575 575 NI NI . F 5 FMT C 1 999 999 FMT FMT . G 6 HOH A 1 101 4 HOH HOH . G 6 HOH A 2 102 18 HOH HOH . G 6 HOH A 3 103 20 HOH HOH . G 6 HOH A 4 104 21 HOH HOH . G 6 HOH A 5 105 22 HOH HOH . G 6 HOH A 6 106 60 HOH HOH . G 6 HOH A 7 107 75 HOH HOH . G 6 HOH A 8 108 84 HOH HOH . G 6 HOH A 9 109 85 HOH HOH . G 6 HOH A 10 110 95 HOH HOH . G 6 HOH A 11 111 97 HOH HOH . G 6 HOH A 12 112 102 HOH HOH . G 6 HOH A 13 113 103 HOH HOH . G 6 HOH A 14 114 110 HOH HOH . G 6 HOH A 15 115 119 HOH HOH . G 6 HOH A 16 116 136 HOH HOH . G 6 HOH A 17 117 146 HOH HOH . H 6 HOH B 1 102 72 HOH HOH . H 6 HOH B 2 103 78 HOH HOH . H 6 HOH B 3 104 108 HOH HOH . H 6 HOH B 4 105 121 HOH HOH . H 6 HOH B 5 106 125 HOH HOH . H 6 HOH B 6 107 132 HOH HOH . H 6 HOH B 7 108 142 HOH HOH . H 6 HOH B 8 109 143 HOH HOH . H 6 HOH B 9 110 162 HOH HOH . H 6 HOH B 10 111 164 HOH HOH . I 6 HOH C 1 1000 2 HOH HOH . I 6 HOH C 2 1001 3 HOH HOH . I 6 HOH C 3 1002 5 HOH HOH . I 6 HOH C 4 1003 6 HOH HOH . I 6 HOH C 5 1004 7 HOH HOH . I 6 HOH C 6 1005 8 HOH HOH . I 6 HOH C 7 1006 9 HOH HOH . I 6 HOH C 8 1007 10 HOH HOH . I 6 HOH C 9 1008 11 HOH HOH . I 6 HOH C 10 1009 12 HOH HOH . I 6 HOH C 11 1010 13 HOH HOH . I 6 HOH C 12 1011 14 HOH HOH . I 6 HOH C 13 1012 15 HOH HOH . I 6 HOH C 14 1013 16 HOH HOH . I 6 HOH C 15 1014 17 HOH HOH . I 6 HOH C 16 1015 19 HOH HOH . I 6 HOH C 17 1016 23 HOH HOH . I 6 HOH C 18 1017 24 HOH HOH . I 6 HOH C 19 1018 25 HOH HOH . I 6 HOH C 20 1019 26 HOH HOH . I 6 HOH C 21 1020 27 HOH HOH . I 6 HOH C 22 1021 28 HOH HOH . I 6 HOH C 23 1022 29 HOH HOH . I 6 HOH C 24 1023 30 HOH HOH . I 6 HOH C 25 1024 31 HOH HOH . I 6 HOH C 26 1025 32 HOH HOH . I 6 HOH C 27 1026 33 HOH HOH . I 6 HOH C 28 1027 34 HOH HOH . I 6 HOH C 29 1028 35 HOH HOH . I 6 HOH C 30 1029 36 HOH HOH . I 6 HOH C 31 1030 37 HOH HOH . I 6 HOH C 32 1031 38 HOH HOH . I 6 HOH C 33 1032 39 HOH HOH . I 6 HOH C 34 1033 40 HOH HOH . I 6 HOH C 35 1034 41 HOH HOH . I 6 HOH C 36 1035 42 HOH HOH . I 6 HOH C 37 1036 43 HOH HOH . I 6 HOH C 38 1037 44 HOH HOH . I 6 HOH C 39 1038 45 HOH HOH . I 6 HOH C 40 1039 46 HOH HOH . I 6 HOH C 41 1040 47 HOH HOH . I 6 HOH C 42 1041 48 HOH HOH . I 6 HOH C 43 1042 49 HOH HOH . I 6 HOH C 44 1043 50 HOH HOH . I 6 HOH C 45 1044 51 HOH HOH . I 6 HOH C 46 1045 52 HOH HOH . I 6 HOH C 47 1046 53 HOH HOH . I 6 HOH C 48 1047 54 HOH HOH . I 6 HOH C 49 1048 55 HOH HOH . I 6 HOH C 50 1049 56 HOH HOH . I 6 HOH C 51 1050 57 HOH HOH . I 6 HOH C 52 1051 58 HOH HOH . I 6 HOH C 53 1052 59 HOH HOH . I 6 HOH C 54 1053 61 HOH HOH . I 6 HOH C 55 1054 62 HOH HOH . I 6 HOH C 56 1055 63 HOH HOH . I 6 HOH C 57 1056 64 HOH HOH . I 6 HOH C 58 1057 65 HOH HOH . I 6 HOH C 59 1058 66 HOH HOH . I 6 HOH C 60 1059 67 HOH HOH . I 6 HOH C 61 1060 68 HOH HOH . I 6 HOH C 62 1061 69 HOH HOH . I 6 HOH C 63 1062 70 HOH HOH . I 6 HOH C 64 1063 71 HOH HOH . I 6 HOH C 65 1064 73 HOH HOH . I 6 HOH C 66 1065 74 HOH HOH . I 6 HOH C 67 1066 76 HOH HOH . I 6 HOH C 68 1067 77 HOH HOH . I 6 HOH C 69 1068 79 HOH HOH . I 6 HOH C 70 1069 80 HOH HOH . I 6 HOH C 71 1070 81 HOH HOH . I 6 HOH C 72 1071 82 HOH HOH . I 6 HOH C 73 1072 83 HOH HOH . I 6 HOH C 74 1073 86 HOH HOH . I 6 HOH C 75 1074 87 HOH HOH . I 6 HOH C 76 1075 88 HOH HOH . I 6 HOH C 77 1076 89 HOH HOH . I 6 HOH C 78 1077 90 HOH HOH . I 6 HOH C 79 1078 91 HOH HOH . I 6 HOH C 80 1079 92 HOH HOH . I 6 HOH C 81 1080 93 HOH HOH . I 6 HOH C 82 1081 94 HOH HOH . I 6 HOH C 83 1082 96 HOH HOH . I 6 HOH C 84 1083 98 HOH HOH . I 6 HOH C 85 1084 99 HOH HOH . I 6 HOH C 86 1085 100 HOH HOH . I 6 HOH C 87 1086 101 HOH HOH . I 6 HOH C 88 1087 104 HOH HOH . I 6 HOH C 89 1088 105 HOH HOH . I 6 HOH C 90 1089 106 HOH HOH . I 6 HOH C 91 1090 107 HOH HOH . I 6 HOH C 92 1091 109 HOH HOH . I 6 HOH C 93 1092 111 HOH HOH . I 6 HOH C 94 1093 112 HOH HOH . I 6 HOH C 95 1094 113 HOH HOH . I 6 HOH C 96 1095 114 HOH HOH . I 6 HOH C 97 1096 115 HOH HOH . I 6 HOH C 98 1097 116 HOH HOH . I 6 HOH C 99 1098 117 HOH HOH . I 6 HOH C 100 1099 118 HOH HOH . I 6 HOH C 101 1100 120 HOH HOH . I 6 HOH C 102 1101 122 HOH HOH . I 6 HOH C 103 1102 123 HOH HOH . I 6 HOH C 104 1103 124 HOH HOH . I 6 HOH C 105 1104 126 HOH HOH . I 6 HOH C 106 1105 127 HOH HOH . I 6 HOH C 107 1106 128 HOH HOH . I 6 HOH C 108 1107 129 HOH HOH . I 6 HOH C 109 1108 130 HOH HOH . I 6 HOH C 110 1109 131 HOH HOH . I 6 HOH C 111 1110 133 HOH HOH . I 6 HOH C 112 1111 134 HOH HOH . I 6 HOH C 113 1112 135 HOH HOH . I 6 HOH C 114 1113 137 HOH HOH . I 6 HOH C 115 1114 138 HOH HOH . I 6 HOH C 116 1115 139 HOH HOH . I 6 HOH C 117 1116 140 HOH HOH . I 6 HOH C 118 1117 141 HOH HOH . I 6 HOH C 119 1118 144 HOH HOH . I 6 HOH C 120 1119 145 HOH HOH . I 6 HOH C 121 1120 147 HOH HOH . I 6 HOH C 122 1121 148 HOH HOH . I 6 HOH C 123 1122 149 HOH HOH . I 6 HOH C 124 1123 150 HOH HOH . I 6 HOH C 125 1124 151 HOH HOH . I 6 HOH C 126 1125 152 HOH HOH . I 6 HOH C 127 1126 153 HOH HOH . I 6 HOH C 128 1127 154 HOH HOH . I 6 HOH C 129 1128 155 HOH HOH . I 6 HOH C 130 1129 156 HOH HOH . I 6 HOH C 131 1130 157 HOH HOH . I 6 HOH C 132 1131 158 HOH HOH . I 6 HOH C 133 1132 159 HOH HOH . I 6 HOH C 134 1133 160 HOH HOH . I 6 HOH C 135 1134 161 HOH HOH . I 6 HOH C 136 1135 163 HOH HOH . I 6 HOH C 137 1136 165 HOH HOH . I 6 HOH C 138 1137 166 HOH HOH . I 6 HOH C 139 1138 167 HOH HOH . I 6 HOH C 140 1139 168 HOH HOH . I 6 HOH C 141 1140 169 HOH HOH . I 6 HOH C 142 1141 170 HOH HOH . I 6 HOH C 143 1142 171 HOH HOH . I 6 HOH C 144 1143 172 HOH HOH . I 6 HOH C 145 1144 173 HOH HOH . I 6 HOH C 146 1145 174 HOH HOH . I 6 HOH C 147 1146 175 HOH HOH . I 6 HOH C 148 1147 502 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NI _atom_site.label_atom_id NI _atom_site.label_comp_id NI _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x 68.141 _atom_site.Cartn_y 104.814 _atom_site.Cartn_z 72.595 _atom_site.occupancy 0.92 _atom_site.B_iso_or_equiv 17 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NI _atom_site.auth_comp_id NI _atom_site.auth_seq_id 575 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 218 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #