data_1A80 # _model_server_result.job_id fBRJlqRQAPEjeyYKbnIuhg _model_server_result.datetime_utc '2025-02-14 00:11:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1a80 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":300}' # _entry.id 1A80 # _exptl.entry_id 1A80 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.2 _cell.angle_gamma 90 _cell.entry_id 1A80 _cell.length_a 35.7 _cell.length_b 55.8 _cell.length_c 74.7 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1A80 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 224 n n PA O2A NDP sing 225 n n PA O5B NDP sing 226 n n PA O3 NDP sing 227 n n O2A HOA2 NDP sing 228 n n O5B C5B NDP sing 229 n n C5B C4B NDP sing 230 n n C5B H51A NDP sing 231 n n C5B H52A NDP sing 232 n n C4B O4B NDP sing 233 n n C4B C3B NDP sing 234 n n C4B H4B NDP sing 235 n n O4B C1B NDP sing 236 n n C3B O3B NDP sing 237 n n C3B C2B NDP sing 238 n n C3B H3B NDP sing 239 n n O3B HO3A NDP sing 240 n n C2B O2B NDP sing 241 n n C2B C1B NDP sing 242 n n C2B H2B NDP sing 243 n n O2B P2B NDP sing 244 n n C1B N9A NDP sing 245 n n C1B H1B NDP sing 246 n n N9A C8A NDP sing 247 n y N9A C4A NDP sing 248 n y C8A N7A NDP doub 249 n y C8A H8A NDP sing 250 n n N7A C5A NDP sing 251 n y C5A C6A NDP sing 252 n y C5A C4A NDP doub 253 n y C6A N6A NDP sing 254 n n C6A N1A NDP doub 255 n y N6A H61A NDP sing 256 n n N6A H62A NDP sing 257 n n N1A C2A NDP sing 258 n y C2A N3A NDP doub 259 n y C2A H2A NDP sing 260 n n N3A C4A NDP sing 261 n y O3 PN NDP sing 262 n n PN O1N NDP doub 263 n n PN O2N NDP sing 264 n n PN O5D NDP sing 265 n n O2N H21N NDP sing 266 n n O5D C5D NDP sing 267 n n C5D C4D NDP sing 268 n n C5D H51N NDP sing 269 n n C5D H52N NDP sing 270 n n C4D O4D NDP sing 271 n n C4D C3D NDP sing 272 n n C4D H4D NDP sing 273 n n O4D C1D NDP sing 274 n n C3D O3D NDP sing 275 n n C3D C2D NDP sing 276 n n C3D H3D NDP sing 277 n n O3D HO3N NDP sing 278 n n C2D O2D NDP sing 279 n n C2D C1D NDP sing 280 n n C2D H2D NDP sing 281 n n O2D HO2N NDP sing 282 n n C1D N1N NDP sing 283 n n C1D H1D NDP sing 284 n n N1N C2N NDP sing 285 n n N1N C6N NDP sing 286 n n C2N C3N NDP doub 287 n n C2N H2N NDP sing 288 n n C3N C7N NDP sing 289 n n C3N C4N NDP sing 290 n n C7N O7N NDP doub 291 n n C7N N7N NDP sing 292 n n N7N H71N NDP sing 293 n n N7N H72N NDP sing 294 n n C4N C5N NDP sing 295 n n C4N H41N NDP sing 296 n n C4N H42N NDP sing 297 n n C5N C6N NDP doub 298 n n C5N H5N NDP sing 299 n n C6N H6N NDP sing 300 n n P2B O1X NDP doub 301 n n P2B O2X NDP sing 302 n n P2B O3X NDP sing 303 n n O2X HOP2 NDP sing 304 n n O3X HOP3 NDP sing 305 n n # _atom_sites.entry_id 1A80 _atom_sites.fract_transf_matrix[1][1] 0.028011 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001076 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017921 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013397 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NDP A 1 300 300 NDP NDP . C 3 HOH A 1 301 301 HOH HOH . C 3 HOH A 2 302 302 HOH HOH . C 3 HOH A 3 303 303 HOH HOH . C 3 HOH A 4 304 304 HOH HOH . C 3 HOH A 5 306 306 HOH HOH . C 3 HOH A 6 307 307 HOH HOH . C 3 HOH A 7 308 308 HOH HOH . C 3 HOH A 8 309 309 HOH HOH . C 3 HOH A 9 310 310 HOH HOH . C 3 HOH A 10 311 311 HOH HOH . C 3 HOH A 11 312 312 HOH HOH . C 3 HOH A 12 313 313 HOH HOH . C 3 HOH A 13 314 314 HOH HOH . C 3 HOH A 14 315 315 HOH HOH . C 3 HOH A 15 316 316 HOH HOH . C 3 HOH A 16 317 317 HOH HOH . C 3 HOH A 17 318 318 HOH HOH . C 3 HOH A 18 319 319 HOH HOH . C 3 HOH A 19 320 320 HOH HOH . C 3 HOH A 20 321 321 HOH HOH . C 3 HOH A 21 322 322 HOH HOH . C 3 HOH A 22 323 323 HOH HOH . C 3 HOH A 23 324 324 HOH HOH . C 3 HOH A 24 325 325 HOH HOH . C 3 HOH A 25 326 326 HOH HOH . C 3 HOH A 26 327 327 HOH HOH . C 3 HOH A 27 328 328 HOH HOH . C 3 HOH A 28 329 329 HOH HOH . C 3 HOH A 29 330 330 HOH HOH . C 3 HOH A 30 331 331 HOH HOH . C 3 HOH A 31 332 332 HOH HOH . C 3 HOH A 32 333 333 HOH HOH . C 3 HOH A 33 334 334 HOH HOH . C 3 HOH A 34 335 335 HOH HOH . C 3 HOH A 35 336 336 HOH HOH . C 3 HOH A 36 337 337 HOH HOH . C 3 HOH A 37 338 338 HOH HOH . C 3 HOH A 38 339 339 HOH HOH . C 3 HOH A 39 340 340 HOH HOH . C 3 HOH A 40 341 341 HOH HOH . C 3 HOH A 41 342 342 HOH HOH . C 3 HOH A 42 343 343 HOH HOH . C 3 HOH A 43 344 344 HOH HOH . C 3 HOH A 44 345 345 HOH HOH . C 3 HOH A 45 346 346 HOH HOH . C 3 HOH A 46 347 347 HOH HOH . C 3 HOH A 47 348 348 HOH HOH . C 3 HOH A 48 349 349 HOH HOH . C 3 HOH A 49 350 350 HOH HOH . C 3 HOH A 50 351 351 HOH HOH . C 3 HOH A 51 352 352 HOH HOH . C 3 HOH A 52 353 353 HOH HOH . C 3 HOH A 53 354 354 HOH HOH . C 3 HOH A 54 355 355 HOH HOH . C 3 HOH A 55 356 356 HOH HOH . C 3 HOH A 56 357 357 HOH HOH . C 3 HOH A 57 358 358 HOH HOH . C 3 HOH A 58 359 359 HOH HOH . C 3 HOH A 59 360 360 HOH HOH . C 3 HOH A 60 361 361 HOH HOH . C 3 HOH A 61 362 362 HOH HOH . C 3 HOH A 62 363 363 HOH HOH . C 3 HOH A 63 364 364 HOH HOH . C 3 HOH A 64 365 365 HOH HOH . C 3 HOH A 65 366 366 HOH HOH . C 3 HOH A 66 367 367 HOH HOH . C 3 HOH A 67 368 368 HOH HOH . C 3 HOH A 68 369 369 HOH HOH . C 3 HOH A 69 370 370 HOH HOH . C 3 HOH A 70 371 371 HOH HOH . C 3 HOH A 71 372 372 HOH HOH . C 3 HOH A 72 373 373 HOH HOH . C 3 HOH A 73 374 374 HOH HOH . C 3 HOH A 74 375 375 HOH HOH . C 3 HOH A 75 376 376 HOH HOH . C 3 HOH A 76 377 377 HOH HOH . C 3 HOH A 77 378 378 HOH HOH . C 3 HOH A 78 379 379 HOH HOH . C 3 HOH A 79 380 380 HOH HOH . C 3 HOH A 80 381 381 HOH HOH . C 3 HOH A 81 382 382 HOH HOH . C 3 HOH A 82 383 383 HOH HOH . C 3 HOH A 83 384 384 HOH HOH . C 3 HOH A 84 385 385 HOH HOH . C 3 HOH A 85 386 386 HOH HOH . C 3 HOH A 86 387 387 HOH HOH . C 3 HOH A 87 388 388 HOH HOH . C 3 HOH A 88 389 389 HOH HOH . C 3 HOH A 89 390 390 HOH HOH . C 3 HOH A 90 391 391 HOH HOH . C 3 HOH A 91 392 392 HOH HOH . C 3 HOH A 92 393 393 HOH HOH . C 3 HOH A 93 394 394 HOH HOH . C 3 HOH A 94 395 395 HOH HOH . C 3 HOH A 95 396 396 HOH HOH . C 3 HOH A 96 397 397 HOH HOH . C 3 HOH A 97 398 398 HOH HOH . C 3 HOH A 98 399 399 HOH HOH . C 3 HOH A 99 400 400 HOH HOH . C 3 HOH A 100 401 401 HOH HOH . C 3 HOH A 101 402 402 HOH HOH . C 3 HOH A 102 403 403 HOH HOH . C 3 HOH A 103 404 404 HOH HOH . C 3 HOH A 104 405 405 HOH HOH . C 3 HOH A 105 406 406 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . B 2 11.577 -1.538 14.326 1 17.79 ? PA NDP 300 A 1 HETATM 2 O O1A NDP . . . B 2 11.13 -2.952 14.383 1 13.4 ? O1A NDP 300 A 1 HETATM 3 O O2A NDP . . . B 2 10.566 -0.545 13.829 1 13.19 ? O2A NDP 300 A 1 HETATM 4 O O5B NDP . . . B 2 12.82 -1.518 13.477 1 18.97 ? O5B NDP 300 A 1 HETATM 5 C C5B NDP . . . B 2 13.707 -0.396 13.206 1 21.85 ? C5B NDP 300 A 1 HETATM 6 C C4B NDP . . . B 2 14.914 -0.863 12.375 1 22.35 ? C4B NDP 300 A 1 HETATM 7 O O4B NDP . . . B 2 14.513 -1.325 11.066 1 25.75 ? O4B NDP 300 A 1 HETATM 8 C C3B NDP . . . B 2 15.983 0.178 12.114 1 25.45 ? C3B NDP 300 A 1 HETATM 9 O O3B NDP . . . B 2 17.247 -0.45 12.074 1 27.69 ? O3B NDP 300 A 1 HETATM 10 C C2B NDP . . . B 2 15.621 0.74 10.739 1 25.07 ? C2B NDP 300 A 1 HETATM 11 O O2B NDP . . . B 2 16.786 1.089 10.037 1 20.63 ? O2B NDP 300 A 1 HETATM 12 C C1B NDP . . . B 2 14.98 -0.443 10.046 1 23.85 ? C1B NDP 300 A 1 HETATM 13 N N9A NDP . . . B 2 13.836 -0.053 9.235 1 20.17 ? N9A NDP 300 A 1 HETATM 14 C C8A NDP . . . B 2 12.687 0.678 9.236 1 21.41 ? C8A NDP 300 A 1 HETATM 15 N N7A NDP . . . B 2 11.983 0.586 8.137 1 19.49 ? N7A NDP 300 A 1 HETATM 16 C C5A NDP . . . B 2 12.726 -0.271 7.359 1 22.11 ? C5A NDP 300 A 1 HETATM 17 C C6A NDP . . . B 2 12.538 -0.765 6.056 1 25.34 ? C6A NDP 300 A 1 HETATM 18 N N6A NDP . . . B 2 11.486 -0.45 5.284 1 26.61 ? N6A NDP 300 A 1 HETATM 19 N N1A NDP . . . B 2 13.484 -1.597 5.575 1 27.23 ? N1A NDP 300 A 1 HETATM 20 C C2A NDP . . . B 2 14.538 -1.909 6.343 1 25.67 ? C2A NDP 300 A 1 HETATM 21 N N3A NDP . . . B 2 14.83 -1.493 7.572 1 24.33 ? N3A NDP 300 A 1 HETATM 22 C C4A NDP . . . B 2 13.88 -0.661 8.019 1 21.9 ? C4A NDP 300 A 1 HETATM 23 O O3 NDP . . . B 2 12.171 -1.501 15.736 1 22.05 ? O3 NDP 300 A 1 HETATM 24 P PN NDP . . . B 2 11.954 -0.323 16.889 1 15.88 ? PN NDP 300 A 1 HETATM 25 O O1N NDP . . . B 2 12.589 -0.894 18.124 1 14.3 ? O1N NDP 300 A 1 HETATM 26 O O2N NDP . . . B 2 12.358 1.063 16.532 1 11.2 ? O2N NDP 300 A 1 HETATM 27 O O5D NDP . . . B 2 10.466 -0.351 17.089 1 10.45 ? O5D NDP 300 A 1 HETATM 28 C C5D NDP . . . B 2 9.656 0.746 16.676 1 13.8 ? C5D NDP 300 A 1 HETATM 29 C C4D NDP . . . B 2 9.332 1.742 17.796 1 18.48 ? C4D NDP 300 A 1 HETATM 30 O O4D NDP . . . B 2 8.468 1.171 18.824 1 19.14 ? O4D NDP 300 A 1 HETATM 31 C C3D NDP . . . B 2 10.484 2.35 18.572 1 16.99 ? C3D NDP 300 A 1 HETATM 32 O O3D NDP . . . B 2 11.115 3.352 17.799 1 16.35 ? O3D NDP 300 A 1 HETATM 33 C C2D NDP . . . B 2 9.706 2.965 19.733 1 18.42 ? C2D NDP 300 A 1 HETATM 34 O O2D NDP . . . B 2 9.034 4.146 19.369 1 17.27 ? O2D NDP 300 A 1 HETATM 35 C C1D NDP . . . B 2 8.692 1.868 20.039 1 16.76 ? C1D NDP 300 A 1 HETATM 36 N N1N NDP . . . B 2 9.235 0.923 20.986 1 18.1 ? N1N NDP 300 A 1 HETATM 37 C C2N NDP . . . B 2 8.542 0.824 22.146 1 16.15 ? C2N NDP 300 A 1 HETATM 38 C C3N NDP . . . B 2 9.006 0.07 23.207 1 17.26 ? C3N NDP 300 A 1 HETATM 39 C C7N NDP . . . B 2 8.239 -0.075 24.505 1 15.3 ? C7N NDP 300 A 1 HETATM 40 O O7N NDP . . . B 2 8.661 -0.867 25.329 1 20.61 ? O7N NDP 300 A 1 HETATM 41 N N7N NDP . . . B 2 7.139 0.672 24.642 1 11.41 ? N7N NDP 300 A 1 HETATM 42 C C4N NDP . . . B 2 10.226 -0.605 23.109 1 20.77 ? C4N NDP 300 A 1 HETATM 43 C C5N NDP . . . B 2 10.964 -0.493 21.908 1 26.64 ? C5N NDP 300 A 1 HETATM 44 C C6N NDP . . . B 2 10.423 0.293 20.877 1 18.26 ? C6N NDP 300 A 1 HETATM 45 P P2B NDP . . . B 2 17.028 2.493 9.636 1 17.73 ? P2B NDP 300 A 1 HETATM 46 O O1X NDP . . . B 2 16.386 2.753 8.318 1 16.12 ? O1X NDP 300 A 1 HETATM 47 O O2X NDP . . . B 2 18.492 2.712 9.599 1 11.98 ? O2X NDP 300 A 1 HETATM 48 O O3X NDP . . . B 2 16.504 3.432 10.653 1 20.2 ? O3X NDP 300 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 48 #