data_1A96
#
_model_server_result.job_id            -1S6KqsxGlaJ2TGmxncUxg 
_model_server_result.datetime_utc      '2024-11-14 04:38:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1a96 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":304}' 
#
_entry.id    1A96 
#
_exptl.entry_id    1A96 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              152.111 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            XANTHINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1A96 
_cell.length_a            94.2 
_cell.length_b            94.2 
_cell.length_c            165.9 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1A96 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 H N N 
? 5 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 G O3 PCP . B PCP 301 1_555 F MG MG . B MG 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? 
metalc ? metalc2 G O1 PCP . B PCP 301 1_555 F MG MG . B MG 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? 
metalc ? metalc3 G O2 PCP . B PCP 301 1_555 F MG MG . B MG 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.848 ? 
metalc ? metalc4 G O2B PCP . B PCP 301 1_555 F MG MG . B MG 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? 
metalc ? metalc5 F MG MG . B MG 308 1_555 N O HOH . B HOH 541 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? 
metalc ? metalc6 F MG MG . B MG 308 1_555 N O HOH . B HOH 542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? 
metalc ? metalc7 J O2B PCP . C PCP 302 1_555 I MG MG . C MG 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? 
metalc ? metalc8 J O1 PCP . C PCP 302 1_555 I MG MG . C MG 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? 
metalc ? metalc9 J O3 PCP . C PCP 302 1_555 I MG MG . C MG 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? 
metalc ? metalc10 J O2 PCP . C PCP 302 1_555 I MG MG . C MG 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.819 ? 
metalc ? metalc11 I MG MG . C MG 307 1_555 O O HOH . C HOH 539 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? 
metalc ? metalc12 I MG MG . C MG 307 1_555 O O HOH . C HOH 540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? 
#
_chem_comp.formula           'C5 H4 N4 O2' 
_chem_comp.formula_weight    152.111 
_chem_comp.id                XAN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              XANTHINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N9 C4 XAN sing 419 n y 
N9 C8 XAN sing 420 n y 
N9 HN9 XAN sing 421 n n 
C4 N3 XAN sing 422 n y 
C4 C5 XAN doub 423 n y 
N3 C2 XAN sing 424 n y 
N3 HN3 XAN sing 425 n n 
C2 O2 XAN doub 426 n n 
C2 N1 XAN sing 427 n y 
N1 C6 XAN sing 428 n y 
N1 HN1 XAN sing 429 n n 
C6 O6 XAN doub 430 n n 
C6 C5 XAN sing 431 n y 
C5 N7 XAN sing 432 n y 
N7 C8 XAN doub 433 n y 
C8 H8 XAN sing 434 n n 
#
_atom_sites.entry_id                     1A96 
_atom_sites.fract_transf_matrix[1][1]    0.010616 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010616 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006028 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 BO3 A 1 306 306 BO3 BO3 . 
F 3 MG B 1 308 308 MG MO2 . 
G 4 PCP B 1 301 301 PCP PCP . 
H 5 XAN B 1 304 304 XAN XAN . 
I 3 MG C 1 307 307 MG MO2 . 
J 4 PCP C 1 302 302 PCP PCP . 
K 5 XAN C 1 303 303 XAN XAN . 
L 2 BO3 D 1 305 305 BO3 BO3 . 
M 6 HOH A 1 401 401 HOH HOH . 
M 6 HOH A 2 403 403 HOH HOH . 
M 6 HOH A 3 411 411 HOH HOH . 
M 6 HOH A 4 413 413 HOH HOH . 
M 6 HOH A 5 419 419 HOH HOH . 
M 6 HOH A 6 422 422 HOH HOH . 
M 6 HOH A 7 430 430 HOH HOH . 
M 6 HOH A 8 436 436 HOH HOH . 
M 6 HOH A 9 440 440 HOH HOH . 
M 6 HOH A 10 441 441 HOH HOH . 
M 6 HOH A 11 445 445 HOH HOH . 
M 6 HOH A 12 447 447 HOH HOH . 
M 6 HOH A 13 448 448 HOH HOH . 
M 6 HOH A 14 449 449 HOH HOH . 
M 6 HOH A 15 457 457 HOH HOH . 
M 6 HOH A 16 463 463 HOH HOH . 
M 6 HOH A 17 464 464 HOH HOH . 
M 6 HOH A 18 473 473 HOH HOH . 
M 6 HOH A 19 474 474 HOH HOH . 
M 6 HOH A 20 476 476 HOH HOH . 
M 6 HOH A 21 488 488 HOH HOH . 
M 6 HOH A 22 490 490 HOH HOH . 
M 6 HOH A 23 493 493 HOH HOH . 
M 6 HOH A 24 494 494 HOH HOH . 
M 6 HOH A 25 497 497 HOH HOH . 
M 6 HOH A 26 499 499 HOH HOH . 
M 6 HOH A 27 507 507 HOH HOH . 
M 6 HOH A 28 515 515 HOH HOH . 
M 6 HOH A 29 516 516 HOH HOH . 
M 6 HOH A 30 518 518 HOH HOH . 
M 6 HOH A 31 519 519 HOH HOH . 
M 6 HOH A 32 529 529 HOH HOH . 
M 6 HOH A 33 530 530 HOH HOH . 
M 6 HOH A 34 536 536 HOH HOH . 
M 6 HOH A 35 537 537 HOH HOH . 
N 6 HOH B 1 404 404 HOH HOH . 
N 6 HOH B 2 405 405 HOH HOH . 
N 6 HOH B 3 407 407 HOH HOH . 
N 6 HOH B 4 409 409 HOH HOH . 
N 6 HOH B 5 412 412 HOH HOH . 
N 6 HOH B 6 418 418 HOH HOH . 
N 6 HOH B 7 424 424 HOH HOH . 
N 6 HOH B 8 426 426 HOH HOH . 
N 6 HOH B 9 435 435 HOH HOH . 
N 6 HOH B 10 439 439 HOH HOH . 
N 6 HOH B 11 442 442 HOH HOH . 
N 6 HOH B 12 443 443 HOH HOH . 
N 6 HOH B 13 452 452 HOH HOH . 
N 6 HOH B 14 454 454 HOH HOH . 
N 6 HOH B 15 459 459 HOH HOH . 
N 6 HOH B 16 460 460 HOH HOH . 
N 6 HOH B 17 462 462 HOH HOH . 
N 6 HOH B 18 466 466 HOH HOH . 
N 6 HOH B 19 468 468 HOH HOH . 
N 6 HOH B 20 479 479 HOH HOH . 
N 6 HOH B 21 481 481 HOH HOH . 
N 6 HOH B 22 498 498 HOH HOH . 
N 6 HOH B 23 500 500 HOH HOH . 
N 6 HOH B 24 502 502 HOH HOH . 
N 6 HOH B 25 505 505 HOH HOH . 
N 6 HOH B 26 506 506 HOH HOH . 
N 6 HOH B 27 509 509 HOH HOH . 
N 6 HOH B 28 510 510 HOH HOH . 
N 6 HOH B 29 511 511 HOH HOH . 
N 6 HOH B 30 517 517 HOH HOH . 
N 6 HOH B 31 521 521 HOH HOH . 
N 6 HOH B 32 523 523 HOH HOH . 
N 6 HOH B 33 524 524 HOH HOH . 
N 6 HOH B 34 525 525 HOH HOH . 
N 6 HOH B 35 526 526 HOH HOH . 
N 6 HOH B 36 531 531 HOH HOH . 
N 6 HOH B 37 541 308 HOH MO2 . 
N 6 HOH B 38 542 308 HOH MO2 . 
O 6 HOH C 1 402 402 HOH HOH . 
O 6 HOH C 2 406 406 HOH HOH . 
O 6 HOH C 3 408 408 HOH HOH . 
O 6 HOH C 4 410 410 HOH HOH . 
O 6 HOH C 5 415 415 HOH HOH . 
O 6 HOH C 6 417 417 HOH HOH . 
O 6 HOH C 7 423 423 HOH HOH . 
O 6 HOH C 8 425 425 HOH HOH . 
O 6 HOH C 9 427 427 HOH HOH . 
O 6 HOH C 10 429 429 HOH HOH . 
O 6 HOH C 11 432 432 HOH HOH . 
O 6 HOH C 12 434 434 HOH HOH . 
O 6 HOH C 13 437 437 HOH HOH . 
O 6 HOH C 14 444 444 HOH HOH . 
O 6 HOH C 15 450 450 HOH HOH . 
O 6 HOH C 16 451 451 HOH HOH . 
O 6 HOH C 17 458 458 HOH HOH . 
O 6 HOH C 18 467 467 HOH HOH . 
O 6 HOH C 19 470 470 HOH HOH . 
O 6 HOH C 20 472 472 HOH HOH . 
O 6 HOH C 21 478 478 HOH HOH . 
O 6 HOH C 22 480 480 HOH HOH . 
O 6 HOH C 23 482 482 HOH HOH . 
O 6 HOH C 24 485 485 HOH HOH . 
O 6 HOH C 25 486 486 HOH HOH . 
O 6 HOH C 26 495 495 HOH HOH . 
O 6 HOH C 27 503 503 HOH HOH . 
O 6 HOH C 28 504 504 HOH HOH . 
O 6 HOH C 29 513 513 HOH HOH . 
O 6 HOH C 30 514 514 HOH HOH . 
O 6 HOH C 31 520 520 HOH HOH . 
O 6 HOH C 32 522 522 HOH HOH . 
O 6 HOH C 33 527 527 HOH HOH . 
O 6 HOH C 34 532 532 HOH HOH . 
O 6 HOH C 35 539 307 HOH MO2 . 
O 6 HOH C 36 540 307 HOH MO2 . 
P 6 HOH D 1 414 414 HOH HOH . 
P 6 HOH D 2 416 416 HOH HOH . 
P 6 HOH D 3 420 420 HOH HOH . 
P 6 HOH D 4 421 421 HOH HOH . 
P 6 HOH D 5 428 428 HOH HOH . 
P 6 HOH D 6 431 431 HOH HOH . 
P 6 HOH D 7 433 433 HOH HOH . 
P 6 HOH D 8 438 438 HOH HOH . 
P 6 HOH D 9 446 446 HOH HOH . 
P 6 HOH D 10 453 453 HOH HOH . 
P 6 HOH D 11 455 455 HOH HOH . 
P 6 HOH D 12 456 456 HOH HOH . 
P 6 HOH D 13 461 461 HOH HOH . 
P 6 HOH D 14 465 465 HOH HOH . 
P 6 HOH D 15 469 469 HOH HOH . 
P 6 HOH D 16 471 471 HOH HOH . 
P 6 HOH D 17 475 475 HOH HOH . 
P 6 HOH D 18 477 477 HOH HOH . 
P 6 HOH D 19 483 483 HOH HOH . 
P 6 HOH D 20 484 484 HOH HOH . 
P 6 HOH D 21 487 487 HOH HOH . 
P 6 HOH D 22 489 489 HOH HOH . 
P 6 HOH D 23 491 491 HOH HOH . 
P 6 HOH D 24 492 492 HOH HOH . 
P 6 HOH D 25 496 496 HOH HOH . 
P 6 HOH D 26 501 501 HOH HOH . 
P 6 HOH D 27 508 508 HOH HOH . 
P 6 HOH D 28 512 512 HOH HOH . 
P 6 HOH D 29 528 528 HOH HOH . 
P 6 HOH D 30 533 533 HOH HOH . 
P 6 HOH D 31 534 534 HOH HOH . 
P 6 HOH D 32 535 535 HOH HOH . 
P 6 HOH D 33 538 538 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N9 XAN . . . H 5 21.757 136.775 25.807 1 37.59 ? N9 XAN 304 B 1 
HETATM 2 C C4 XAN . . . H 5 21.842 136.019 26.952 1 37.21 ? C4 XAN 304 B 1 
HETATM 3 N N3 XAN . . . H 5 22.674 134.974 27.12 1 36.35 ? N3 XAN 304 B 1 
HETATM 4 C C2 XAN . . . H 5 22.632 134.462 28.385 1 35.92 ? C2 XAN 304 B 1 
HETATM 5 O O2 XAN . . . H 5 23.379 133.524 28.695 1 35.78 ? O2 XAN 304 B 1 
HETATM 6 N N1 XAN . . . H 5 21.767 135.004 29.348 1 33 ? N1 XAN 304 B 1 
HETATM 7 C C6 XAN . . . H 5 20.909 136.08 29.194 1 34.45 ? C6 XAN 304 B 1 
HETATM 8 O O6 XAN . . . H 5 20.232 136.489 30.138 1 30.16 ? O6 XAN 304 B 1 
HETATM 9 C C5 XAN . . . H 5 20.983 136.581 27.863 1 35.75 ? C5 XAN 304 B 1 
HETATM 10 N N7 XAN . . . H 5 20.351 137.667 27.293 1 37.11 ? N7 XAN 304 B 1 
HETATM 11 C C8 XAN . . . H 5 20.842 137.748 26.086 1 38.69 ? C8 XAN 304 B 1 
#
_model_server_stats.io_time_ms              52 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           11 
#