data_1A97
#
_model_server_result.job_id            b1Bb9kIaLfZA8lB5i175QA 
_model_server_result.datetime_utc      '2024-11-13 13:38:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1a97 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":305}' 
#
_entry.id    1A97 
#
_exptl.entry_id    1A97 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              363.221 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-5'-MONOPHOSPHATE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1A97 
_cell.length_a            94.042 
_cell.length_b            94.042 
_cell.length_c            166.914 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1A97 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 I N N 
#
_chem_comp.formula           'C10 H14 N5 O8 P' 
_chem_comp.formula_weight    363.221 
_chem_comp.id                5GP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "GUANOSINE-5'-MONOPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P 5GP doub 1 n n 
P O2P 5GP sing 2 n n 
P O3P 5GP sing 3 n n 
P O5' 5GP sing 4 n n 
O2P HOP2 5GP sing 5 n n 
O3P HOP3 5GP sing 6 n n 
O5' C5' 5GP sing 7 n n 
C5' C4' 5GP sing 8 n n 
C5' "H5'1" 5GP sing 9 n n 
C5' "H5'2" 5GP sing 10 n n 
C4' O4' 5GP sing 11 n n 
C4' C3' 5GP sing 12 n n 
C4' H4' 5GP sing 13 n n 
O4' C1' 5GP sing 14 n n 
C3' O3' 5GP sing 15 n n 
C3' C2' 5GP sing 16 n n 
C3' H3' 5GP sing 17 n n 
O3' HO3' 5GP sing 18 n n 
C2' O2' 5GP sing 19 n n 
C2' C1' 5GP sing 20 n n 
C2' H2' 5GP sing 21 n n 
O2' HO2' 5GP sing 22 n n 
C1' N9 5GP sing 23 n n 
C1' H1' 5GP sing 24 n n 
N9 C8 5GP sing 25 n y 
N9 C4 5GP sing 26 n y 
C8 N7 5GP doub 27 n y 
C8 H8 5GP sing 28 n n 
N7 C5 5GP sing 29 n y 
C5 C6 5GP sing 30 n n 
C5 C4 5GP doub 31 n y 
C6 O6 5GP doub 32 n n 
C6 N1 5GP sing 33 n n 
N1 C2 5GP sing 34 n n 
N1 HN1 5GP sing 35 n n 
C2 N2 5GP sing 36 n n 
C2 N3 5GP doub 37 n n 
N2 HN21 5GP sing 38 n n 
N2 HN22 5GP sing 39 n n 
N3 C4 5GP sing 40 n n 
#
_atom_sites.entry_id                     1A97 
_atom_sites.fract_transf_matrix[1][1]    0.010634 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010634 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005991 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 BO3 A 1 302 302 BO3 BO3 . 
F 2 BO3 B 1 304 304 BO3 BO3 . 
G 3 5GP B 1 305 305 5GP 5GP . 
H 2 BO3 C 1 303 303 BO3 BO3 . 
I 3 5GP C 1 306 306 5GP 5GP . 
J 2 BO3 D 1 301 301 BO3 BO3 . 
K 4 HOH A 1 406 406 HOH HOH . 
K 4 HOH A 2 407 407 HOH HOH . 
K 4 HOH A 3 408 408 HOH HOH . 
K 4 HOH A 4 409 409 HOH HOH . 
K 4 HOH A 5 410 410 HOH HOH . 
K 4 HOH A 6 414 414 HOH HOH . 
K 4 HOH A 7 418 418 HOH HOH . 
K 4 HOH A 8 419 419 HOH HOH . 
K 4 HOH A 9 428 428 HOH HOH . 
K 4 HOH A 10 438 438 HOH HOH . 
K 4 HOH A 11 439 439 HOH HOH . 
K 4 HOH A 12 448 448 HOH HOH . 
L 4 HOH B 1 401 401 HOH HOH . 
L 4 HOH B 2 402 402 HOH HOH . 
L 4 HOH B 3 404 404 HOH HOH . 
L 4 HOH B 4 405 405 HOH HOH . 
L 4 HOH B 5 413 413 HOH HOH . 
L 4 HOH B 6 415 415 HOH HOH . 
L 4 HOH B 7 423 423 HOH HOH . 
L 4 HOH B 8 431 431 HOH HOH . 
L 4 HOH B 9 433 433 HOH HOH . 
L 4 HOH B 10 434 434 HOH HOH . 
L 4 HOH B 11 436 436 HOH HOH . 
L 4 HOH B 12 440 440 HOH HOH . 
L 4 HOH B 13 446 446 HOH HOH . 
M 4 HOH C 1 411 411 HOH HOH . 
M 4 HOH C 2 417 417 HOH HOH . 
M 4 HOH C 3 420 420 HOH HOH . 
M 4 HOH C 4 424 424 HOH HOH . 
M 4 HOH C 5 426 426 HOH HOH . 
M 4 HOH C 6 427 427 HOH HOH . 
M 4 HOH C 7 430 430 HOH HOH . 
M 4 HOH C 8 432 432 HOH HOH . 
M 4 HOH C 9 437 437 HOH HOH . 
M 4 HOH C 10 443 443 HOH HOH . 
M 4 HOH C 11 444 444 HOH HOH . 
N 4 HOH D 1 403 403 HOH HOH . 
N 4 HOH D 2 412 412 HOH HOH . 
N 4 HOH D 3 416 416 HOH HOH . 
N 4 HOH D 4 421 421 HOH HOH . 
N 4 HOH D 5 422 422 HOH HOH . 
N 4 HOH D 6 425 425 HOH HOH . 
N 4 HOH D 7 429 429 HOH HOH . 
N 4 HOH D 8 435 435 HOH HOH . 
N 4 HOH D 9 441 441 HOH HOH . 
N 4 HOH D 10 442 442 HOH HOH . 
N 4 HOH D 11 445 445 HOH HOH . 
N 4 HOH D 12 447 447 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P 5GP . . . G 3 17.76 138.747 22.045 1 43.63 ? P 5GP 305 B 1 
HETATM 2 O O1P 5GP . . . G 3 16.642 137.911 22.534 1 43.93 ? O1P 5GP 305 B 1 
HETATM 3 O O2P 5GP . . . G 3 17.82 138.791 20.59 1 47.37 ? O2P 5GP 305 B 1 
HETATM 4 O O3P 5GP . . . G 3 17.795 140.057 22.726 1 45.9 ? O3P 5GP 305 B 1 
HETATM 5 O O5' 5GP . . . G 3 19.041 138.087 22.619 1 45.92 ? O5' 5GP 305 B 1 
HETATM 6 C C5' 5GP . . . G 3 19.05 136.78 23.153 1 49.52 ? C5' 5GP 305 B 1 
HETATM 7 C C4' 5GP . . . G 3 20.382 136.172 23.012 1 52.11 ? C4' 5GP 305 B 1 
HETATM 8 O O4' 5GP . . . G 3 21.417 136.857 23.775 1 52.8 ? O4' 5GP 305 B 1 
HETATM 9 C C3' 5GP . . . G 3 20.305 134.798 23.578 1 53.4 ? C3' 5GP 305 B 1 
HETATM 10 O O3' 5GP . . . G 3 20.068 133.85 22.525 1 53.83 ? O3' 5GP 305 B 1 
HETATM 11 C C2' 5GP . . . G 3 21.625 134.602 24.203 1 53.71 ? C2' 5GP 305 B 1 
HETATM 12 O O2' 5GP . . . G 3 22.556 134.059 23.279 1 55.9 ? O2' 5GP 305 B 1 
HETATM 13 C C1' 5GP . . . G 3 22.065 135.978 24.711 1 51.65 ? C1' 5GP 305 B 1 
HETATM 14 N N9 5GP . . . G 3 21.508 136.223 26.096 1 49.2 ? N9 5GP 305 B 1 
HETATM 15 C C8 5GP . . . G 3 20.562 137.176 26.451 1 47.59 ? C8 5GP 305 B 1 
HETATM 16 N N7 5GP . . . G 3 20.246 137.177 27.718 1 46.61 ? N7 5GP 305 B 1 
HETATM 17 C C5 5GP . . . G 3 21.02 136.16 28.278 1 47.53 ? C5 5GP 305 B 1 
HETATM 18 C C6 5GP . . . G 3 21.083 135.708 29.633 1 47.46 ? C6 5GP 305 B 1 
HETATM 19 O O6 5GP . . . G 3 20.45 136.142 30.591 1 48.75 ? O6 5GP 305 B 1 
HETATM 20 N N1 5GP . . . G 3 21.982 134.657 29.812 1 46.79 ? N1 5GP 305 B 1 
HETATM 21 C C2 5GP . . . G 3 22.749 134.088 28.793 1 46.26 ? C2 5GP 305 B 1 
HETATM 22 N N2 5GP . . . G 3 23.562 133.088 29.13 1 45.5 ? N2 5GP 305 B 1 
HETATM 23 N N3 5GP . . . G 3 22.694 134.511 27.501 1 47.36 ? N3 5GP 305 B 1 
HETATM 24 C C4 5GP . . . G 3 21.803 135.556 27.303 1 48.11 ? C4 5GP 305 B 1 
#
_model_server_stats.io_time_ms              57 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           24 
#