data_1AAZ # _model_server_result.job_id GvDc61e97c6-YPQs4fja0Q _model_server_result.datetime_utc '2024-12-26 12:02:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1aaz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":189}' # _entry.id 1AAZ # _exptl.entry_id 1AAZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.4 _cell.angle_gamma 90 _cell.entry_id 1AAZ _cell.length_a 54.1 _cell.length_b 45.9 _cell.length_c 40.8 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AAZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E 1 1 B,C,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 14 A CYS 14 1_555 A SG CYS 17 A CYS 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 14 B CYS 14 1_555 B SG CYS 17 B CYS 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc1 A OD1 ASP 45 A ASP 45 1_455 C CD CD . B CD 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.49 ? metalc ? metalc2 A OD2 ASP 45 A ASP 45 1_455 C CD CD . B CD 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc3 B NE2 HIS 12 B HIS 12 1_555 D CD CD . B CD 189 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc4 B ND1 HIS 75 B HIS 75 1_555 C CD CD . B CD 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc5 C CD CD . B CD 188 1_555 F O HOH . B HOH 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.797 ? metalc ? metalc6 C CD CD . B CD 188 1_555 F O HOH . B HOH 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc7 D CD CD . B CD 189 1_555 F O HOH . B HOH 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? metalc ? metalc8 D CD CD . B CD 189 1_555 F O HOH . B HOH 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc9 D CD CD . B CD 189 1_555 F O HOH . B HOH 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1AAZ _atom_sites.fract_transf_matrix[1][1] 0.018484 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00306 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021786 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024843 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CD B 1 188 188 CD CD . D 2 CD B 1 189 189 CD CD . E 3 HOH A 1 88 2 HOH HOH . E 3 HOH A 2 89 5 HOH HOH . E 3 HOH A 3 90 6 HOH HOH . E 3 HOH A 4 91 7 HOH HOH . E 3 HOH A 5 92 8 HOH HOH . E 3 HOH A 6 93 10 HOH HOH . E 3 HOH A 7 94 20 HOH HOH . E 3 HOH A 8 95 21 HOH HOH . E 3 HOH A 9 96 23 HOH HOH . E 3 HOH A 10 97 24 HOH HOH . E 3 HOH A 11 98 25 HOH HOH . E 3 HOH A 12 99 26 HOH HOH . E 3 HOH A 13 100 27 HOH HOH . E 3 HOH A 14 101 28 HOH HOH . E 3 HOH A 15 102 29 HOH HOH . E 3 HOH A 16 103 30 HOH HOH . E 3 HOH A 17 104 31 HOH HOH . E 3 HOH A 18 105 32 HOH HOH . E 3 HOH A 19 106 39 HOH HOH . E 3 HOH A 20 107 41 HOH HOH . E 3 HOH A 21 108 42 HOH HOH . E 3 HOH A 22 109 43 HOH HOH . E 3 HOH A 23 110 50 HOH HOH . E 3 HOH A 24 111 51 HOH HOH . E 3 HOH A 25 112 52 HOH HOH . E 3 HOH A 26 113 54 HOH HOH . E 3 HOH A 27 114 55 HOH HOH . E 3 HOH A 28 115 62 HOH HOH . E 3 HOH A 29 116 63 HOH HOH . E 3 HOH A 30 117 64 HOH HOH . E 3 HOH A 31 118 65 HOH HOH . E 3 HOH A 32 119 66 HOH HOH . E 3 HOH A 33 120 67 HOH HOH . E 3 HOH A 34 121 68 HOH HOH . E 3 HOH A 35 122 69 HOH HOH . E 3 HOH A 36 123 70 HOH HOH . E 3 HOH A 37 124 71 HOH HOH . E 3 HOH A 38 125 72 HOH HOH . E 3 HOH A 39 126 73 HOH HOH . E 3 HOH A 40 127 74 HOH HOH . E 3 HOH A 41 128 75 HOH HOH . E 3 HOH A 42 129 76 HOH HOH . E 3 HOH A 43 130 80 HOH HOH . E 3 HOH A 44 131 81 HOH HOH . E 3 HOH A 45 132 82 HOH HOH . E 3 HOH A 46 133 84 HOH HOH . E 3 HOH A 47 134 85 HOH HOH . E 3 HOH A 48 135 86 HOH HOH . E 3 HOH A 49 136 87 HOH HOH . E 3 HOH A 50 137 88 HOH HOH . E 3 HOH A 51 138 89 HOH HOH . E 3 HOH A 52 139 90 HOH HOH . E 3 HOH A 53 140 91 HOH HOH . E 3 HOH A 54 141 92 HOH HOH . E 3 HOH A 55 142 93 HOH HOH . E 3 HOH A 56 143 94 HOH HOH . E 3 HOH A 57 144 95 HOH HOH . E 3 HOH A 58 145 96 HOH HOH . E 3 HOH A 59 146 97 HOH HOH . E 3 HOH A 60 147 98 HOH HOH . E 3 HOH A 61 148 99 HOH HOH . E 3 HOH A 62 149 100 HOH HOH . E 3 HOH A 63 150 101 HOH HOH . E 3 HOH A 64 151 102 HOH HOH . E 3 HOH A 65 152 103 HOH HOH . E 3 HOH A 66 153 104 HOH HOH . E 3 HOH A 67 154 105 HOH HOH . E 3 HOH A 68 155 106 HOH HOH . E 3 HOH A 69 156 107 HOH HOH . E 3 HOH A 70 157 108 HOH HOH . E 3 HOH A 71 158 109 HOH HOH . E 3 HOH A 72 159 110 HOH HOH . E 3 HOH A 73 160 128 HOH HOH . E 3 HOH A 74 161 132 HOH HOH . E 3 HOH A 75 162 160 HOH HOH . E 3 HOH A 76 163 161 HOH HOH . E 3 HOH A 77 164 162 HOH HOH . E 3 HOH A 78 165 163 HOH HOH . E 3 HOH A 79 166 164 HOH HOH . E 3 HOH A 80 167 165 HOH HOH . E 3 HOH A 81 168 166 HOH HOH . E 3 HOH A 82 169 167 HOH HOH . E 3 HOH A 83 170 168 HOH HOH . E 3 HOH A 84 171 169 HOH HOH . E 3 HOH A 85 172 170 HOH HOH . E 3 HOH A 86 173 171 HOH HOH . E 3 HOH A 87 174 172 HOH HOH . E 3 HOH A 88 175 175 HOH HOH . E 3 HOH A 89 176 177 HOH HOH . E 3 HOH A 90 177 182 HOH HOH . E 3 HOH A 91 178 183 HOH HOH . E 3 HOH A 92 179 185 HOH HOH . E 3 HOH A 93 180 186 HOH HOH . E 3 HOH A 94 181 187 HOH HOH . E 3 HOH A 95 182 188 HOH HOH . E 3 HOH A 96 183 189 HOH HOH . E 3 HOH A 97 184 190 HOH HOH . E 3 HOH A 98 185 191 HOH HOH . E 3 HOH A 99 186 192 HOH HOH . E 3 HOH A 100 187 193 HOH HOH . E 3 HOH A 101 188 194 HOH HOH . E 3 HOH A 102 189 195 HOH HOH . E 3 HOH A 103 190 196 HOH HOH . E 3 HOH A 104 191 197 HOH HOH . E 3 HOH A 105 192 198 HOH HOH . E 3 HOH A 106 193 199 HOH HOH . E 3 HOH A 107 194 200 HOH HOH . E 3 HOH A 108 195 201 HOH HOH . E 3 HOH A 109 196 202 HOH HOH . E 3 HOH A 110 197 203 HOH HOH . E 3 HOH A 111 198 205 HOH HOH . E 3 HOH A 112 199 206 HOH HOH . E 3 HOH A 113 200 214 HOH HOH . E 3 HOH A 114 201 215 HOH HOH . E 3 HOH A 115 202 216 HOH HOH . E 3 HOH A 116 203 218 HOH HOH . E 3 HOH A 117 204 219 HOH HOH . E 3 HOH A 118 205 220 HOH HOH . E 3 HOH A 119 206 222 HOH HOH . F 3 HOH B 1 190 1 HOH HOH . F 3 HOH B 2 191 3 HOH HOH . F 3 HOH B 3 192 4 HOH HOH . F 3 HOH B 4 193 9 HOH HOH . F 3 HOH B 5 194 11 HOH HOH . F 3 HOH B 6 195 12 HOH HOH . F 3 HOH B 7 196 13 HOH HOH . F 3 HOH B 8 197 14 HOH HOH . F 3 HOH B 9 198 15 HOH HOH . F 3 HOH B 10 199 16 HOH HOH . F 3 HOH B 11 200 17 HOH HOH . F 3 HOH B 12 201 18 HOH HOH . F 3 HOH B 13 202 19 HOH HOH . F 3 HOH B 14 203 22 HOH HOH . F 3 HOH B 15 204 33 HOH HOH . F 3 HOH B 16 205 34 HOH HOH . F 3 HOH B 17 206 35 HOH HOH . F 3 HOH B 18 207 36 HOH HOH . F 3 HOH B 19 208 37 HOH HOH . F 3 HOH B 20 209 38 HOH HOH . F 3 HOH B 21 210 40 HOH HOH . F 3 HOH B 22 211 44 HOH HOH . F 3 HOH B 23 212 45 HOH HOH . F 3 HOH B 24 213 46 HOH HOH . F 3 HOH B 25 214 47 HOH HOH . F 3 HOH B 26 215 48 HOH HOH . F 3 HOH B 27 216 49 HOH HOH . F 3 HOH B 28 217 53 HOH HOH . F 3 HOH B 29 218 56 HOH HOH . F 3 HOH B 30 219 57 HOH HOH . F 3 HOH B 31 220 58 HOH HOH . F 3 HOH B 32 221 59 HOH HOH . F 3 HOH B 33 222 60 HOH HOH . F 3 HOH B 34 223 61 HOH HOH . F 3 HOH B 35 224 77 HOH HOH . F 3 HOH B 36 225 78 HOH HOH . F 3 HOH B 37 226 79 HOH HOH . F 3 HOH B 38 227 83 HOH HOH . F 3 HOH B 39 228 111 HOH HOH . F 3 HOH B 40 229 112 HOH HOH . F 3 HOH B 41 230 113 HOH HOH . F 3 HOH B 42 231 114 HOH HOH . F 3 HOH B 43 232 115 HOH HOH . F 3 HOH B 44 233 116 HOH HOH . F 3 HOH B 45 234 117 HOH HOH . F 3 HOH B 46 235 118 HOH HOH . F 3 HOH B 47 236 119 HOH HOH . F 3 HOH B 48 237 120 HOH HOH . F 3 HOH B 49 238 121 HOH HOH . F 3 HOH B 50 239 122 HOH HOH . F 3 HOH B 51 240 123 HOH HOH . F 3 HOH B 52 241 124 HOH HOH . F 3 HOH B 53 242 125 HOH HOH . F 3 HOH B 54 243 126 HOH HOH . F 3 HOH B 55 244 127 HOH HOH . F 3 HOH B 56 245 129 HOH HOH . F 3 HOH B 57 246 130 HOH HOH . F 3 HOH B 58 247 131 HOH HOH . F 3 HOH B 59 248 133 HOH HOH . F 3 HOH B 60 249 134 HOH HOH . F 3 HOH B 61 250 135 HOH HOH . F 3 HOH B 62 251 136 HOH HOH . F 3 HOH B 63 252 137 HOH HOH . F 3 HOH B 64 253 138 HOH HOH . F 3 HOH B 65 254 139 HOH HOH . F 3 HOH B 66 255 140 HOH HOH . F 3 HOH B 67 256 141 HOH HOH . F 3 HOH B 68 257 142 HOH HOH . F 3 HOH B 69 258 143 HOH HOH . F 3 HOH B 70 259 144 HOH HOH . F 3 HOH B 71 260 145 HOH HOH . F 3 HOH B 72 261 146 HOH HOH . F 3 HOH B 73 262 147 HOH HOH . F 3 HOH B 74 263 148 HOH HOH . F 3 HOH B 75 264 149 HOH HOH . F 3 HOH B 76 265 150 HOH HOH . F 3 HOH B 77 266 151 HOH HOH . F 3 HOH B 78 267 152 HOH HOH . F 3 HOH B 79 268 153 HOH HOH . F 3 HOH B 80 269 154 HOH HOH . F 3 HOH B 81 270 155 HOH HOH . F 3 HOH B 82 271 156 HOH HOH . F 3 HOH B 83 272 157 HOH HOH . F 3 HOH B 84 273 158 HOH HOH . F 3 HOH B 85 274 159 HOH HOH . F 3 HOH B 86 275 173 HOH HOH . F 3 HOH B 87 276 174 HOH HOH . F 3 HOH B 88 277 176 HOH HOH . F 3 HOH B 89 278 178 HOH HOH . F 3 HOH B 90 279 179 HOH HOH . F 3 HOH B 91 280 180 HOH HOH . F 3 HOH B 92 281 181 HOH HOH . F 3 HOH B 93 282 184 HOH HOH . F 3 HOH B 94 283 204 HOH HOH . F 3 HOH B 95 284 207 HOH HOH . F 3 HOH B 96 285 208 HOH HOH . F 3 HOH B 97 286 209 HOH HOH . F 3 HOH B 98 287 210 HOH HOH . F 3 HOH B 99 288 211 HOH HOH . F 3 HOH B 100 289 212 HOH HOH . F 3 HOH B 101 290 213 HOH HOH . F 3 HOH B 102 291 217 HOH HOH . F 3 HOH B 103 292 221 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 6.398 _atom_site.Cartn_y 9.252 _atom_site.Cartn_z 7.614 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 16.22 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 189 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #