data_1ABB
#
_model_server_result.job_id            8CjpzY1OoYMCd5edtIQlsA 
_model_server_result.datetime_utc      '2024-10-13 19:22:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1abb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":920}' 
#
_entry.id    1ABB 
#
_exptl.entry_id    1ABB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              348.206 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'INOSINIC ACID' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          109.29 
_cell.angle_gamma         90 
_cell.entry_id            1ABB 
_cell.length_a            119 
_cell.length_b            188.1 
_cell.length_c            88.1 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1ABB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 J N N 
? 4 M N N 
? 4 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NZ LYS 671 A LYS 680 1_555 F C4A PDP . A PDP 931 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.378 ? 
covale ? covale2 B NZ LYS 671 B LYS 680 1_555 I C4A PDP . B PDP 932 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.372 ? 
covale ? covale3 C NZ LYS 671 C LYS 680 1_555 L C4A PDP . C PDP 933 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? 
covale ? covale4 D NZ LYS 671 D LYS 680 1_555 O C4A PDP . D PDP 934 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? 
#
_chem_comp.formula           'C10 H13 N4 O8 P' 
_chem_comp.formula_weight    348.206 
_chem_comp.id                IMP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              'INOSINIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P IMP doub 171 n n 
P O2P IMP sing 172 n n 
P O3P IMP sing 173 n n 
P O5' IMP sing 174 n n 
O2P HOP2 IMP sing 175 n n 
O3P HOP3 IMP sing 176 n n 
O5' C5' IMP sing 177 n n 
C5' C4' IMP sing 178 n n 
C5' "H5'1" IMP sing 179 n n 
C5' "H5'2" IMP sing 180 n n 
C4' O4' IMP sing 181 n n 
C4' C3' IMP sing 182 n n 
C4' H4' IMP sing 183 n n 
O4' C1' IMP sing 184 n n 
C3' O3' IMP sing 185 n n 
C3' C2' IMP sing 186 n n 
C3' H3' IMP sing 187 n n 
O3' HO3' IMP sing 188 n n 
C2' O2' IMP sing 189 n n 
C2' C1' IMP sing 190 n n 
C2' H2' IMP sing 191 n n 
O2' HO2' IMP sing 192 n n 
C1' N9 IMP sing 193 n n 
C1' H1' IMP sing 194 n n 
N9 C8 IMP sing 195 n y 
N9 C4 IMP sing 196 n y 
C8 N7 IMP doub 197 n y 
C8 H8 IMP sing 198 n n 
N7 C5 IMP sing 199 n y 
C5 C6 IMP sing 200 n n 
C5 C4 IMP doub 201 n y 
C6 O6 IMP doub 202 n n 
C6 N1 IMP sing 203 n n 
N1 C2 IMP sing 204 n n 
N1 HN1 IMP sing 205 n n 
C2 N3 IMP doub 206 n n 
C2 H2 IMP sing 207 n n 
N3 C4 IMP sing 208 n n 
#
_atom_sites.entry_id                     1ABB 
_atom_sites.fract_transf_matrix[1][1]    0.008403 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002941 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005316 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012026 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 SO4 A 1 900 900 SO4 SO4 . 
F 3 PDP A 1 931 931 PDP PDP . 
G 4 IMP A 1 920 920 IMP IMP . 
H 2 SO4 B 1 900 900 SO4 SO4 . 
I 3 PDP B 1 932 932 PDP PDP . 
J 4 IMP B 1 920 920 IMP IMP . 
K 2 SO4 C 1 900 900 SO4 SO4 . 
L 3 PDP C 1 933 933 PDP PDP . 
M 4 IMP C 1 920 920 IMP IMP . 
N 2 SO4 D 1 900 900 SO4 SO4 . 
O 3 PDP D 1 934 934 PDP PDP . 
P 4 IMP D 1 920 920 IMP IMP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P IMP . . . G 4 64.092 -16.792 35.261 1 45.35 ? P IMP 920 A 1 
HETATM 2 O O1P IMP . . . G 4 63.313 -17.212 34.086 1 49.03 ? O1P IMP 920 A 1 
HETATM 3 O O2P IMP . . . G 4 63.909 -15.335 35.544 1 42.58 ? O2P IMP 920 A 1 
HETATM 4 O O3P IMP . . . G 4 65.493 -17.094 35.092 1 51.67 ? O3P IMP 920 A 1 
HETATM 5 O O5' IMP . . . G 4 63.706 -17.743 36.569 1 40.93 ? O5' IMP 920 A 1 
HETATM 6 C C5' IMP . . . G 4 62.383 -18.05 37.113 1 34.62 ? C5' IMP 920 A 1 
HETATM 7 C C4' IMP . . . G 4 62.242 -19.28 38.076 1 32.75 ? C4' IMP 920 A 1 
HETATM 8 O O4' IMP . . . G 4 62.681 -20.34 37.343 1 33.71 ? O4' IMP 920 A 1 
HETATM 9 C C3' IMP . . . G 4 63.031 -19.359 39.344 1 35.02 ? C3' IMP 920 A 1 
HETATM 10 O O3' IMP . . . G 4 62.332 -18.765 40.435 1 38.81 ? O3' IMP 920 A 1 
HETATM 11 C C2' IMP . . . G 4 63.082 -20.869 39.634 1 36.38 ? C2' IMP 920 A 1 
HETATM 12 O O2' IMP . . . G 4 61.914 -21.227 40.404 1 35.92 ? O2' IMP 920 A 1 
HETATM 13 C C1' IMP . . . G 4 62.992 -21.435 38.254 1 36.62 ? C1' IMP 920 A 1 
HETATM 14 N N9 IMP . . . G 4 64.225 -22.048 37.659 1 41.09 ? N9 IMP 920 A 1 
HETATM 15 C C8 IMP . . . G 4 65.078 -21.404 36.787 1 44.36 ? C8 IMP 920 A 1 
HETATM 16 N N7 IMP . . . G 4 65.933 -22.171 36.185 1 43.44 ? N7 IMP 920 A 1 
HETATM 17 C C5 IMP . . . G 4 65.637 -23.433 36.656 1 47.77 ? C5 IMP 920 A 1 
HETATM 18 C C6 IMP . . . G 4 66.2 -24.684 36.354 1 48.61 ? C6 IMP 920 A 1 
HETATM 19 O O6 IMP . . . G 4 67.105 -24.835 35.41 1 48.49 ? O6 IMP 920 A 1 
HETATM 20 N N1 IMP . . . G 4 65.696 -25.761 36.983 1 46.88 ? N1 IMP 920 A 1 
HETATM 21 C C2 IMP . . . G 4 64.696 -25.568 37.853 1 45.06 ? C2 IMP 920 A 1 
HETATM 22 N N3 IMP . . . G 4 64.079 -24.446 38.226 1 49.31 ? N3 IMP 920 A 1 
HETATM 23 C C4 IMP . . . G 4 64.608 -23.383 37.578 1 46.35 ? C4 IMP 920 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    50 
_model_server_stats.query_time_ms           281 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           23 
#