data_1ACL # _model_server_result.job_id V3yJBqcd_AWgGzDB037bDw _model_server_result.datetime_utc '2024-11-28 01:18:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1acl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":999}' # _entry.id 1ACL # _exptl.entry_id 1ACL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 258.486 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DECAMETHONIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1ACL _cell.length_a 113.05 _cell.length_b 113.05 _cell.length_c 137.5 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ACL _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 137.5 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 67 A CYS 67 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? disulf ? disulf2 A SG CYS 254 A CYS 254 1_555 A SG CYS 265 A CYS 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.956 ? disulf ? disulf3 A SG CYS 402 A CYS 402 1_555 A SG CYS 521 A CYS 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? # _chem_comp.formula 'C16 H38 N2 2' _chem_comp.formula_weight 258.486 _chem_comp.id DME _chem_comp.mon_nstd_flag . _chem_comp.name 'DECAMETHONIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 DME sing 83 n n N1 C13 DME sing 84 n n N1 C14 DME sing 85 n n N1 C15 DME sing 86 n n C2 C3 DME sing 87 n n C2 H21 DME sing 88 n n C2 H22 DME sing 89 n n C3 C4 DME sing 90 n n C3 H31 DME sing 91 n n C3 H32 DME sing 92 n n C4 C5 DME sing 93 n n C4 H41 DME sing 94 n n C4 H42 DME sing 95 n n C5 C6 DME sing 96 n n C5 H51 DME sing 97 n n C5 H52 DME sing 98 n n C6 C7 DME sing 99 n n C6 H61 DME sing 100 n n C6 H62 DME sing 101 n n C7 C8 DME sing 102 n n C7 H71 DME sing 103 n n C7 H72 DME sing 104 n n C8 C9 DME sing 105 n n C8 H81 DME sing 106 n n C8 H82 DME sing 107 n n C9 C10 DME sing 108 n n C9 H91 DME sing 109 n n C9 H92 DME sing 110 n n C10 C11 DME sing 111 n n C10 H101 DME sing 112 n n C10 H102 DME sing 113 n n C11 N12 DME sing 114 n n C11 H111 DME sing 115 n n C11 H112 DME sing 116 n n N12 C16 DME sing 117 n n N12 C17 DME sing 118 n n N12 C18 DME sing 119 n n C13 H131 DME sing 120 n n C13 H132 DME sing 121 n n C13 H133 DME sing 122 n n C14 H141 DME sing 123 n n C14 H142 DME sing 124 n n C14 H143 DME sing 125 n n C15 H151 DME sing 126 n n C15 H152 DME sing 127 n n C15 H153 DME sing 128 n n C16 H161 DME sing 129 n n C16 H162 DME sing 130 n n C16 H163 DME sing 131 n n C17 H171 DME sing 132 n n C17 H172 DME sing 133 n n C17 H173 DME sing 134 n n C18 H181 DME sing 135 n n C18 H182 DME sing 136 n n C18 H183 DME sing 137 n n # _atom_sites.entry_id 1ACL _atom_sites.fract_transf_matrix[1][1] 0.008846 _atom_sites.fract_transf_matrix[1][2] 0.005107 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010214 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007273 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DME A 1 999 999 DME DME . C 3 HOH A 1 601 601 HOH HOH . C 3 HOH A 2 602 602 HOH HOH . C 3 HOH A 3 603 603 HOH HOH . C 3 HOH A 4 604 604 HOH HOH . C 3 HOH A 5 605 605 HOH HOH . C 3 HOH A 6 606 606 HOH HOH . C 3 HOH A 7 607 607 HOH HOH . C 3 HOH A 8 608 608 HOH HOH . C 3 HOH A 9 609 609 HOH HOH . C 3 HOH A 10 610 610 HOH HOH . C 3 HOH A 11 611 611 HOH HOH . C 3 HOH A 12 612 612 HOH HOH . C 3 HOH A 13 613 613 HOH HOH . C 3 HOH A 14 614 614 HOH HOH . C 3 HOH A 15 615 615 HOH HOH . C 3 HOH A 16 616 616 HOH HOH . C 3 HOH A 17 617 617 HOH HOH . C 3 HOH A 18 618 618 HOH HOH . C 3 HOH A 19 619 619 HOH HOH . C 3 HOH A 20 620 620 HOH HOH . C 3 HOH A 21 621 621 HOH HOH . C 3 HOH A 22 622 622 HOH HOH . C 3 HOH A 23 623 623 HOH HOH . C 3 HOH A 24 624 624 HOH HOH . C 3 HOH A 25 625 625 HOH HOH . C 3 HOH A 26 626 626 HOH HOH . C 3 HOH A 27 627 627 HOH HOH . C 3 HOH A 28 628 628 HOH HOH . C 3 HOH A 29 629 629 HOH HOH . C 3 HOH A 30 630 630 HOH HOH . C 3 HOH A 31 631 631 HOH HOH . C 3 HOH A 32 632 632 HOH HOH . C 3 HOH A 33 633 633 HOH HOH . C 3 HOH A 34 634 634 HOH HOH . C 3 HOH A 35 635 635 HOH HOH . C 3 HOH A 36 636 636 HOH HOH . C 3 HOH A 37 637 637 HOH HOH . C 3 HOH A 38 638 638 HOH HOH . C 3 HOH A 39 639 639 HOH HOH . C 3 HOH A 40 640 640 HOH HOH . C 3 HOH A 41 641 641 HOH HOH . C 3 HOH A 42 642 642 HOH HOH . C 3 HOH A 43 643 643 HOH HOH . C 3 HOH A 44 644 644 HOH HOH . C 3 HOH A 45 645 645 HOH HOH . C 3 HOH A 46 646 646 HOH HOH . C 3 HOH A 47 647 647 HOH HOH . C 3 HOH A 48 648 648 HOH HOH . C 3 HOH A 49 649 649 HOH HOH . C 3 HOH A 50 650 650 HOH HOH . C 3 HOH A 51 651 651 HOH HOH . C 3 HOH A 52 652 652 HOH HOH . C 3 HOH A 53 653 653 HOH HOH . C 3 HOH A 54 654 654 HOH HOH . C 3 HOH A 55 655 655 HOH HOH . C 3 HOH A 56 656 656 HOH HOH . C 3 HOH A 57 658 658 HOH HOH . C 3 HOH A 58 659 659 HOH HOH . C 3 HOH A 59 660 660 HOH HOH . C 3 HOH A 60 661 661 HOH HOH . C 3 HOH A 61 662 662 HOH HOH . C 3 HOH A 62 663 663 HOH HOH . C 3 HOH A 63 664 664 HOH HOH . C 3 HOH A 64 665 665 HOH HOH . C 3 HOH A 65 666 666 HOH HOH . C 3 HOH A 66 667 667 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 DME . . . B 2 0.354 62.248 71.567 1 21.86 ? N1 DME 999 A 1 HETATM 2 C C2 DME . . . B 2 1.174 62.295 70.34 1 20.34 ? C2 DME 999 A 1 HETATM 3 C C3 DME . . . B 2 1.939 63.625 70.294 1 19.23 ? C3 DME 999 A 1 HETATM 4 C C4 DME . . . B 2 3.211 63.724 69.452 1 19.57 ? C4 DME 999 A 1 HETATM 5 C C5 DME . . . B 2 3.767 65.143 69.695 1 20.97 ? C5 DME 999 A 1 HETATM 6 C C6 DME . . . B 2 5.009 65.507 68.892 1 14.6 ? C6 DME 999 A 1 HETATM 7 C C7 DME . . . B 2 4.749 66.485 67.771 1 20.98 ? C7 DME 999 A 1 HETATM 8 C C8 DME . . . B 2 4.339 67.92 68.136 1 12.44 ? C8 DME 999 A 1 HETATM 9 C C9 DME . . . B 2 3.711 68.65 66.914 1 20.29 ? C9 DME 999 A 1 HETATM 10 C C10 DME . . . B 2 4.292 68.241 65.534 1 22.74 ? C10 DME 999 A 1 HETATM 11 C C11 DME . . . B 2 3.84 69.056 64.293 1 26.94 ? C11 DME 999 A 1 HETATM 12 N N12 DME . . . B 2 4.766 68.964 63.115 1 25.24 ? N12 DME 999 A 1 HETATM 13 C C13 DME . . . B 2 -0.382 63.521 71.796 1 24.3 ? C13 DME 999 A 1 HETATM 14 C C14 DME . . . B 2 -0.683 61.201 71.454 1 24.41 ? C14 DME 999 A 1 HETATM 15 C C15 DME . . . B 2 1.203 61.9 72.734 1 25.02 ? C15 DME 999 A 1 HETATM 16 C C16 DME . . . B 2 5.964 69.816 63.326 1 18.56 ? C16 DME 999 A 1 HETATM 17 C C17 DME . . . B 2 4.072 69.378 61.885 1 19.07 ? C17 DME 999 A 1 HETATM 18 C C18 DME . . . B 2 5.167 67.571 62.883 1 28.44 ? C18 DME 999 A 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 248 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 18 #