data_1ACM # _model_server_result.job_id H7FoO-Tu9LJ2MMLysmdejg _model_server_result.datetime_utc '2024-10-11 02:19:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1acm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":311}' # _entry.id 1ACM # _exptl.entry_id 1ACM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 255.119 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'N-(PHOSPHONACETYL)-L-ASPARTIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1ACM _cell.length_a 122.2 _cell.length_b 122.2 _cell.length_c 156.2 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ACM _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3 2 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 122.2 0 0 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 61.1 105.828304 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B SG CYS 109 B CYS 109 1_555 F ZN ZN . B ZN 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc2 B SG CYS 114 B CYS 114 1_555 F ZN ZN . B ZN 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc3 B SG CYS 138 B CYS 138 1_555 F ZN ZN . B ZN 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc4 B SG CYS 141 B CYS 141 1_555 F ZN ZN . B ZN 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc5 D SG CYS 109 D CYS 109 1_555 H ZN ZN . D ZN 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc6 D SG CYS 114 D CYS 114 1_555 H ZN ZN . D ZN 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc7 D SG CYS 138 D CYS 138 1_555 H ZN ZN . D ZN 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc8 D SG CYS 141 D CYS 141 1_555 H ZN ZN . D ZN 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? # _chem_comp.formula 'C6 H10 N O8 P' _chem_comp.formula_weight 255.119 _chem_comp.id PAL _chem_comp.mon_nstd_flag . _chem_comp.name 'N-(PHOSPHONACETYL)-L-ASPARTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1P PAL doub 237 n n P O2P PAL sing 238 n n P O3P PAL sing 239 n n P C1P PAL sing 240 n n O2P HOP2 PAL sing 241 n n O3P HOP3 PAL sing 242 n n C1P C1 PAL sing 243 n n C1P H1P1 PAL sing 244 n n C1P H1P2 PAL sing 245 n n C1 O1 PAL doub 246 n n C1 N2 PAL sing 247 n n N2 C2 PAL sing 248 n n N2 HN2 PAL sing 249 n n C2 C4 PAL sing 250 n n C2 C3 PAL sing 251 n n C2 H2 PAL sing 252 n n C4 O2 PAL doub 253 n n C4 O3 PAL sing 254 n n O3 HO3 PAL sing 255 n n C3 C5 PAL sing 256 n n C3 H31 PAL sing 257 n n C3 H32 PAL sing 258 n n C5 O4 PAL doub 259 n n C5 O5 PAL sing 260 n n O5 HO5 PAL sing 261 n n # _atom_sites.entry_id 1ACM _atom_sites.fract_transf_matrix[1][1] 0.008177 _atom_sites.fract_transf_matrix[1][2] 0.004721 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009442 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006394 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 PAL A 1 311 311 PAL PAL . F 4 ZN B 1 154 154 ZN ZN . G 3 PAL C 1 311 311 PAL PAL . H 4 ZN D 1 154 154 ZN ZN . I 5 HOH A 1 312 1 HOH HOH . I 5 HOH A 2 313 2 HOH HOH . I 5 HOH A 3 314 3 HOH HOH . I 5 HOH A 4 315 4 HOH HOH . I 5 HOH A 5 316 5 HOH HOH . I 5 HOH A 6 317 6 HOH HOH . I 5 HOH A 7 318 7 HOH HOH . I 5 HOH A 8 319 8 HOH HOH . J 5 HOH C 1 312 9 HOH HOH . J 5 HOH C 2 313 10 HOH HOH . J 5 HOH C 3 314 11 HOH HOH . J 5 HOH C 4 315 12 HOH HOH . J 5 HOH C 5 316 13 HOH HOH . J 5 HOH C 6 317 14 HOH HOH . J 5 HOH C 7 318 15 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PAL . . . G 3 68.573 49.396 64.268 1 7.23 ? P PAL 311 C 1 HETATM 2 O O1P PAL . . . G 3 67.432 49.221 65.299 1 13.62 ? O1P PAL 311 C 1 HETATM 3 O O2P PAL . . . G 3 68.03 49.617 62.825 1 4.77 ? O2P PAL 311 C 1 HETATM 4 O O3P PAL . . . G 3 69.571 48.199 64.322 1 12.73 ? O3P PAL 311 C 1 HETATM 5 C C1P PAL . . . G 3 69.491 50.898 64.732 1 10.39 ? C1P PAL 311 C 1 HETATM 6 C C1 PAL . . . G 3 68.652 52.116 64.416 1 17.15 ? C1 PAL 311 C 1 HETATM 7 O O1 PAL . . . G 3 67.717 52.472 65.135 1 22.32 ? O1 PAL 311 C 1 HETATM 8 N N2 PAL . . . G 3 68.952 52.743 63.288 1 21.59 ? N2 PAL 311 C 1 HETATM 9 C C2 PAL . . . G 3 68.261 53.941 62.83 1 20.19 ? C2 PAL 311 C 1 HETATM 10 C C4 PAL . . . G 3 66.825 53.959 62.24 1 24.43 ? C4 PAL 311 C 1 HETATM 11 O O2 PAL . . . G 3 66.198 52.93 61.945 1 22.1 ? O2 PAL 311 C 1 HETATM 12 O O3 PAL . . . G 3 66.348 55.075 62.061 1 26.23 ? O3 PAL 311 C 1 HETATM 13 C C3 PAL . . . G 3 69.246 54.596 61.891 1 17.69 ? C3 PAL 311 C 1 HETATM 14 C C5 PAL . . . G 3 69.543 53.895 60.576 1 19.4 ? C5 PAL 311 C 1 HETATM 15 O O4 PAL . . . G 3 70.354 54.425 59.822 1 19.77 ? O4 PAL 311 C 1 HETATM 16 O O5 PAL . . . G 3 68.976 52.836 60.299 1 27.03 ? O5 PAL 311 C 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 16 #