data_1AD5 # _model_server_result.job_id k5APchjPcL6kq1YkHIVbIg _model_server_result.datetime_utc '2024-11-26 23:20:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ad5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":3}' # _entry.id 1AD5 # _exptl.entry_id 1AD5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1AD5 _cell.length_a 72.767 _cell.length_b 92.36 _cell.length_c 178.29 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AD5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E 1 1 B,F,G,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLN 433 A GLN 526 1_555 A N PTR 434 A PTR 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C PTR 434 A PTR 527 1_555 A N GLN 435 A GLN 528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale3 B C GLN 433 B GLN 526 1_555 B N PTR 434 B PTR 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale4 B C PTR 434 B PTR 527 1_555 B N GLN 435 B GLN 528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? metalc ? metalc1 E O1B ANP . A ANP 1 1_555 D CA CA . A CA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc2 E O2A ANP . A ANP 1 1_555 D CA CA . A CA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? metalc ? metalc3 C CA CA . A CA 2 1_555 A OE1 GLU 397 A GLU 490 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? metalc ? metalc4 C CA CA . A CA 2 1_555 A OE2 GLU 397 A GLU 490 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.673 ? metalc ? metalc5 C CA CA . A CA 2 1_555 B O GLU 431 B GLU 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.6 ? metalc ? metalc6 C CA CA . A CA 2 1_555 B O PTR 434 B PTR 527 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? metalc ? metalc7 D CA CA . A CA 3 1_555 A ND2 ASN 308 A ASN 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? metalc ? metalc8 D CA CA . A CA 3 1_555 A OD2 ASP 321 A ASP 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc9 A O GLU 431 A GLU 524 1_555 F CA CA . B CA 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.764 ? metalc ? metalc10 A O PTR 434 A PTR 527 1_555 F CA CA . B CA 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.719 ? metalc ? metalc11 F CA CA . B CA 1 1_555 B OE2 GLU 397 B GLU 490 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.762 ? metalc ? metalc12 F CA CA . B CA 1 1_555 B OE1 GLU 397 B GLU 490 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.717 ? metalc ? metalc13 G CA CA . B CA 4 1_555 B ND2 ASN 308 B ASN 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc14 G CA CA . B CA 4 1_555 B OD2 ASP 321 B ASP 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc15 G CA CA . B CA 4 1_555 H O2A ANP . B ANP 532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.764 ? metalc ? metalc16 G CA CA . B CA 4 1_555 H O1B ANP . B ANP 532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1AD5 _atom_sites.fract_transf_matrix[1][1] 0.013742 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010827 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005609 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 2 2 CA CA . D 2 CA A 1 3 3 CA CA . E 3 ANP A 1 1 1 ANP ANP . F 2 CA B 1 1 1 CA CA . G 2 CA B 1 4 4 CA CA . H 3 ANP B 1 532 1 ANP ANP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 27.735 _atom_site.Cartn_y 49.387 _atom_site.Cartn_z 104.229 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 22.36 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 3 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 244 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #