data_1AD8
#
_model_server_result.job_id            fHvHeTSg8gQrNdtezvghlQ 
_model_server_result.datetime_utc      '2024-12-27 01:23:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1ad8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1}' 
#
_entry.id    1AD8 
#
_exptl.entry_id    1AD8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          101 
_cell.angle_gamma         90 
_cell.entry_id            1AD8 
_cell.length_a            70.55 
_cell.length_b            72.05 
_cell.length_c            73 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1AD8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 9 L CYS 1 1_555 B SG CYS 119 H CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf2 B SG CYS 28 H CYS 42 1_555 B SG CYS 44 H CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? 
disulf ? disulf3 B SG CYS 173 H CYS 168 1_555 B SG CYS 187 H CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf4 B SG CYS 201 H CYS 191 1_555 B SG CYS 231 H CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
covale ? covale1 B OG SER 205 H SER 195 1_555 E C44 MDL . H MDL 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.424 ? 
covale ? covale2 C C GLU 8 I GLU 62 1_555 C N TYS 9 I TYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale3 C C TYS 9 I TYS 63 1_555 C N LEU 10 I LEU 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
metalc ? metalc1 D NA NA . H NA 1 1_555 B O LYS 174 H LYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? 
metalc ? metalc2 D NA NA . H NA 1 1_555 B O THR 177 H THR 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.184 ? 
metalc ? metalc3 D NA NA . H NA 1 1_555 B O PHE 215 H PHE 204 4_546 ? ? ? A ? ? ? ? ? ? ? ? 2.2 ? 
metalc ? metalc4 D NA NA . H NA 1 1_555 G O HOH . H HOH 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? 
metalc ? metalc5 D NA NA . H NA 1 1_555 G O HOH . H HOH 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? 
metalc ? metalc6 D NA NA . H NA 1 1_555 G O HOH . H HOH 358 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1AD8 
_atom_sites.fract_transf_matrix[1][1]    0.014174 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002755 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013879 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013955 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 NA H 1 1 1 NA NA . 
E 5 MDL H 1 250 250 MDL MDL . 
F 6 HOH L 1 15 5 HOH HOH . 
F 6 HOH L 2 16 23 HOH HOH . 
F 6 HOH L 3 17 25 HOH HOH . 
F 6 HOH L 4 18 74 HOH HOH . 
F 6 HOH L 5 19 81 HOH HOH . 
F 6 HOH L 6 20 89 HOH HOH . 
F 6 HOH L 7 21 90 HOH HOH . 
F 6 HOH L 8 22 107 HOH HOH . 
F 6 HOH L 9 23 112 HOH HOH . 
F 6 HOH L 10 24 122 HOH HOH . 
F 6 HOH L 11 25 123 HOH HOH . 
F 6 HOH L 12 26 136 HOH HOH . 
F 6 HOH L 13 27 154 HOH HOH . 
F 6 HOH L 14 28 155 HOH HOH . 
F 6 HOH L 15 29 158 HOH HOH . 
F 6 HOH L 16 30 170 HOH HOH . 
F 6 HOH L 17 31 186 HOH HOH . 
F 6 HOH L 18 32 195 HOH HOH . 
G 6 HOH H 1 251 1 HOH HOH . 
G 6 HOH H 2 252 2 HOH HOH . 
G 6 HOH H 3 253 3 HOH HOH . 
G 6 HOH H 4 254 4 HOH HOH . 
G 6 HOH H 5 255 6 HOH HOH . 
G 6 HOH H 6 256 7 HOH HOH . 
G 6 HOH H 7 257 8 HOH HOH . 
G 6 HOH H 8 258 9 HOH HOH . 
G 6 HOH H 9 259 10 HOH HOH . 
G 6 HOH H 10 260 11 HOH HOH . 
G 6 HOH H 11 261 12 HOH HOH . 
G 6 HOH H 12 262 13 HOH HOH . 
G 6 HOH H 13 263 14 HOH HOH . 
G 6 HOH H 14 264 15 HOH HOH . 
G 6 HOH H 15 265 16 HOH HOH . 
G 6 HOH H 16 266 17 HOH HOH . 
G 6 HOH H 17 267 18 HOH HOH . 
G 6 HOH H 18 268 19 HOH HOH . 
G 6 HOH H 19 269 20 HOH HOH . 
G 6 HOH H 20 270 21 HOH HOH . 
G 6 HOH H 21 271 22 HOH HOH . 
G 6 HOH H 22 272 24 HOH HOH . 
G 6 HOH H 23 273 26 HOH HOH . 
G 6 HOH H 24 274 27 HOH HOH . 
G 6 HOH H 25 275 29 HOH HOH . 
G 6 HOH H 26 276 30 HOH HOH . 
G 6 HOH H 27 277 31 HOH HOH . 
G 6 HOH H 28 278 32 HOH HOH . 
G 6 HOH H 29 279 33 HOH HOH . 
G 6 HOH H 30 280 34 HOH HOH . 
G 6 HOH H 31 281 35 HOH HOH . 
G 6 HOH H 32 282 36 HOH HOH . 
G 6 HOH H 33 283 37 HOH HOH . 
G 6 HOH H 34 284 38 HOH HOH . 
G 6 HOH H 35 285 39 HOH HOH . 
G 6 HOH H 36 286 40 HOH HOH . 
G 6 HOH H 37 287 41 HOH HOH . 
G 6 HOH H 38 288 42 HOH HOH . 
G 6 HOH H 39 289 43 HOH HOH . 
G 6 HOH H 40 290 44 HOH HOH . 
G 6 HOH H 41 291 45 HOH HOH . 
G 6 HOH H 42 292 46 HOH HOH . 
G 6 HOH H 43 293 47 HOH HOH . 
G 6 HOH H 44 294 48 HOH HOH . 
G 6 HOH H 45 295 49 HOH HOH . 
G 6 HOH H 46 296 50 HOH HOH . 
G 6 HOH H 47 297 51 HOH HOH . 
G 6 HOH H 48 298 52 HOH HOH . 
G 6 HOH H 49 299 53 HOH HOH . 
G 6 HOH H 50 300 54 HOH HOH . 
G 6 HOH H 51 301 55 HOH HOH . 
G 6 HOH H 52 302 56 HOH HOH . 
G 6 HOH H 53 303 57 HOH HOH . 
G 6 HOH H 54 304 58 HOH HOH . 
G 6 HOH H 55 305 59 HOH HOH . 
G 6 HOH H 56 306 60 HOH HOH . 
G 6 HOH H 57 307 61 HOH HOH . 
G 6 HOH H 58 308 62 HOH HOH . 
G 6 HOH H 59 309 63 HOH HOH . 
G 6 HOH H 60 310 65 HOH HOH . 
G 6 HOH H 61 311 66 HOH HOH . 
G 6 HOH H 62 312 67 HOH HOH . 
G 6 HOH H 63 313 68 HOH HOH . 
G 6 HOH H 64 314 69 HOH HOH . 
G 6 HOH H 65 315 70 HOH HOH . 
G 6 HOH H 66 316 71 HOH HOH . 
G 6 HOH H 67 317 72 HOH HOH . 
G 6 HOH H 68 318 73 HOH HOH . 
G 6 HOH H 69 319 75 HOH HOH . 
G 6 HOH H 70 320 76 HOH HOH . 
G 6 HOH H 71 321 77 HOH HOH . 
G 6 HOH H 72 322 78 HOH HOH . 
G 6 HOH H 73 323 79 HOH HOH . 
G 6 HOH H 74 324 80 HOH HOH . 
G 6 HOH H 75 325 82 HOH HOH . 
G 6 HOH H 76 326 83 HOH HOH . 
G 6 HOH H 77 327 84 HOH HOH . 
G 6 HOH H 78 328 85 HOH HOH . 
G 6 HOH H 79 329 86 HOH HOH . 
G 6 HOH H 80 330 87 HOH HOH . 
G 6 HOH H 81 331 88 HOH HOH . 
G 6 HOH H 82 332 91 HOH HOH . 
G 6 HOH H 83 333 92 HOH HOH . 
G 6 HOH H 84 334 93 HOH HOH . 
G 6 HOH H 85 335 94 HOH HOH . 
G 6 HOH H 86 336 95 HOH HOH . 
G 6 HOH H 87 337 96 HOH HOH . 
G 6 HOH H 88 338 97 HOH HOH . 
G 6 HOH H 89 339 98 HOH HOH . 
G 6 HOH H 90 340 99 HOH HOH . 
G 6 HOH H 91 341 100 HOH HOH . 
G 6 HOH H 92 342 101 HOH HOH . 
G 6 HOH H 93 343 102 HOH HOH . 
G 6 HOH H 94 344 103 HOH HOH . 
G 6 HOH H 95 345 104 HOH HOH . 
G 6 HOH H 96 346 105 HOH HOH . 
G 6 HOH H 97 347 106 HOH HOH . 
G 6 HOH H 98 348 108 HOH HOH . 
G 6 HOH H 99 349 109 HOH HOH . 
G 6 HOH H 100 350 110 HOH HOH . 
G 6 HOH H 101 351 111 HOH HOH . 
G 6 HOH H 102 352 113 HOH HOH . 
G 6 HOH H 103 353 114 HOH HOH . 
G 6 HOH H 104 354 115 HOH HOH . 
G 6 HOH H 105 355 116 HOH HOH . 
G 6 HOH H 106 356 117 HOH HOH . 
G 6 HOH H 107 357 118 HOH HOH . 
G 6 HOH H 108 358 119 HOH HOH . 
G 6 HOH H 109 359 120 HOH HOH . 
G 6 HOH H 110 360 121 HOH HOH . 
G 6 HOH H 111 361 124 HOH HOH . 
G 6 HOH H 112 362 125 HOH HOH . 
G 6 HOH H 113 363 126 HOH HOH . 
G 6 HOH H 114 364 127 HOH HOH . 
G 6 HOH H 115 365 128 HOH HOH . 
G 6 HOH H 116 366 129 HOH HOH . 
G 6 HOH H 117 367 130 HOH HOH . 
G 6 HOH H 118 368 131 HOH HOH . 
G 6 HOH H 119 369 132 HOH HOH . 
G 6 HOH H 120 370 133 HOH HOH . 
G 6 HOH H 121 371 135 HOH HOH . 
G 6 HOH H 122 372 137 HOH HOH . 
G 6 HOH H 123 373 138 HOH HOH . 
G 6 HOH H 124 374 139 HOH HOH . 
G 6 HOH H 125 375 140 HOH HOH . 
G 6 HOH H 126 376 141 HOH HOH . 
G 6 HOH H 127 377 142 HOH HOH . 
G 6 HOH H 128 378 143 HOH HOH . 
G 6 HOH H 129 379 144 HOH HOH . 
G 6 HOH H 130 380 145 HOH HOH . 
G 6 HOH H 131 381 146 HOH HOH . 
G 6 HOH H 132 382 147 HOH HOH . 
G 6 HOH H 133 383 148 HOH HOH . 
G 6 HOH H 134 384 149 HOH HOH . 
G 6 HOH H 135 385 150 HOH HOH . 
G 6 HOH H 136 386 151 HOH HOH . 
G 6 HOH H 137 387 152 HOH HOH . 
G 6 HOH H 138 388 153 HOH HOH . 
G 6 HOH H 139 389 156 HOH HOH . 
G 6 HOH H 140 390 157 HOH HOH . 
G 6 HOH H 141 391 159 HOH HOH . 
G 6 HOH H 142 392 160 HOH HOH . 
G 6 HOH H 143 393 161 HOH HOH . 
G 6 HOH H 144 394 162 HOH HOH . 
G 6 HOH H 145 395 163 HOH HOH . 
G 6 HOH H 146 396 164 HOH HOH . 
G 6 HOH H 147 397 165 HOH HOH . 
G 6 HOH H 148 398 166 HOH HOH . 
G 6 HOH H 149 399 167 HOH HOH . 
G 6 HOH H 150 400 168 HOH HOH . 
G 6 HOH H 151 401 169 HOH HOH . 
G 6 HOH H 152 402 171 HOH HOH . 
G 6 HOH H 153 403 172 HOH HOH . 
G 6 HOH H 154 404 173 HOH HOH . 
G 6 HOH H 155 405 174 HOH HOH . 
G 6 HOH H 156 406 175 HOH HOH . 
G 6 HOH H 157 407 176 HOH HOH . 
G 6 HOH H 158 408 177 HOH HOH . 
G 6 HOH H 159 409 178 HOH HOH . 
G 6 HOH H 160 410 179 HOH HOH . 
G 6 HOH H 161 411 180 HOH HOH . 
G 6 HOH H 162 412 181 HOH HOH . 
G 6 HOH H 163 413 182 HOH HOH . 
G 6 HOH H 164 414 183 HOH HOH . 
G 6 HOH H 165 415 184 HOH HOH . 
G 6 HOH H 166 416 185 HOH HOH . 
G 6 HOH H 167 417 187 HOH HOH . 
G 6 HOH H 168 418 188 HOH HOH . 
G 6 HOH H 169 419 189 HOH HOH . 
G 6 HOH H 170 420 190 HOH HOH . 
G 6 HOH H 171 421 191 HOH HOH . 
G 6 HOH H 172 422 192 HOH HOH . 
G 6 HOH H 173 423 193 HOH HOH . 
G 6 HOH H 174 424 194 HOH HOH . 
H 6 HOH I 1 65 28 HOH HOH . 
H 6 HOH I 2 66 64 HOH HOH . 
H 6 HOH I 3 67 134 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               18.122 
_atom_site.Cartn_y               -10.912 
_atom_site.Cartn_z               38.36 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        -3.09 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           1 
_atom_site.auth_asym_id          H 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              41 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           251 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#