data_1AE1 # _model_server_result.job_id JNF6MrgEcPMNOT6uaTqFBg _model_server_result.datetime_utc '2024-10-24 04:28:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ae1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":274}' # _entry.id 1AE1 # _exptl.entry_id 1AE1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 743.405 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1AE1 _cell.length_a 55.74 _cell.length_b 122.75 _cell.length_c 75.51 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AE1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_675 -x+1,-y+2,z -1 0 0 0 -1 0 0 0 1 55.74 245.5 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C21 H28 N7 O17 P3' _chem_comp.formula_weight 743.405 _chem_comp.id NAP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAP doub 237 n n PA O2A NAP sing 238 n n PA O5B NAP sing 239 n n PA O3 NAP sing 240 n n O2A HOA2 NAP sing 241 n n O5B C5B NAP sing 242 n n C5B C4B NAP sing 243 n n C5B H51A NAP sing 244 n n C5B H52A NAP sing 245 n n C4B O4B NAP sing 246 n n C4B C3B NAP sing 247 n n C4B H4B NAP sing 248 n n O4B C1B NAP sing 249 n n C3B O3B NAP sing 250 n n C3B C2B NAP sing 251 n n C3B H3B NAP sing 252 n n O3B HO3A NAP sing 253 n n C2B O2B NAP sing 254 n n C2B C1B NAP sing 255 n n C2B H2B NAP sing 256 n n O2B P2B NAP sing 257 n n C1B N9A NAP sing 258 n n C1B H1B NAP sing 259 n n N9A C8A NAP sing 260 n y N9A C4A NAP sing 261 n y C8A N7A NAP doub 262 n y C8A H8A NAP sing 263 n n N7A C5A NAP sing 264 n y C5A C6A NAP sing 265 n y C5A C4A NAP doub 266 n y C6A N6A NAP sing 267 n n C6A N1A NAP doub 268 n y N6A H61A NAP sing 269 n n N6A H62A NAP sing 270 n n N1A C2A NAP sing 271 n y C2A N3A NAP doub 272 n y C2A H2A NAP sing 273 n n N3A C4A NAP sing 274 n y O3 PN NAP sing 275 n n PN O1N NAP doub 276 n n PN O2N NAP sing 277 n n PN O5D NAP sing 278 n n O5D C5D NAP sing 279 n n C5D C4D NAP sing 280 n n C5D H51N NAP sing 281 n n C5D H52N NAP sing 282 n n C4D O4D NAP sing 283 n n C4D C3D NAP sing 284 n n C4D H4D NAP sing 285 n n O4D C1D NAP sing 286 n n C3D O3D NAP sing 287 n n C3D C2D NAP sing 288 n n C3D H3D NAP sing 289 n n O3D HO3N NAP sing 290 n n C2D O2D NAP sing 291 n n C2D C1D NAP sing 292 n n C2D H2D NAP sing 293 n n O2D HO2N NAP sing 294 n n C1D N1N NAP sing 295 n n C1D H1D NAP sing 296 n n N1N C2N NAP sing 297 n y N1N C6N NAP doub 298 n y C2N C3N NAP doub 299 n y C2N H2N NAP sing 300 n n C3N C7N NAP sing 301 n n C3N C4N NAP sing 302 n y C7N O7N NAP doub 303 n n C7N N7N NAP sing 304 n n N7N H71N NAP sing 305 n n N7N H72N NAP sing 306 n n C4N C5N NAP doub 307 n y C4N H4N NAP sing 308 n n C5N C6N NAP sing 309 n y C5N H5N NAP sing 310 n n C6N H6N NAP sing 311 n n P2B O1X NAP doub 312 n n P2B O2X NAP sing 313 n n P2B O3X NAP sing 314 n n O2X HOP2 NAP sing 315 n n O3X HOP3 NAP sing 316 n n # _atom_sites.entry_id 1AE1 _atom_sites.fract_transf_matrix[1][1] 0.01794 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008147 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013243 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAP A 1 274 274 NAP NAP . D 2 NAP B 1 274 274 NAP NAP . E 3 HOH A 1 275 2 HOH HOH . E 3 HOH A 2 276 3 HOH HOH . E 3 HOH A 3 277 4 HOH HOH . E 3 HOH A 4 278 5 HOH HOH . E 3 HOH A 5 279 6 HOH HOH . E 3 HOH A 6 280 11 HOH HOH . E 3 HOH A 7 281 15 HOH HOH . E 3 HOH A 8 282 16 HOH HOH . E 3 HOH A 9 283 19 HOH HOH . E 3 HOH A 10 284 21 HOH HOH . E 3 HOH A 11 285 23 HOH HOH . E 3 HOH A 12 286 24 HOH HOH . E 3 HOH A 13 287 25 HOH HOH . E 3 HOH A 14 288 26 HOH HOH . E 3 HOH A 15 289 27 HOH HOH . E 3 HOH A 16 290 31 HOH HOH . E 3 HOH A 17 291 36 HOH HOH . E 3 HOH A 18 292 37 HOH HOH . E 3 HOH A 19 293 38 HOH HOH . E 3 HOH A 20 294 39 HOH HOH . E 3 HOH A 21 295 40 HOH HOH . E 3 HOH A 22 296 46 HOH HOH . E 3 HOH A 23 297 48 HOH HOH . E 3 HOH A 24 298 49 HOH HOH . E 3 HOH A 25 299 54 HOH HOH . E 3 HOH A 26 300 56 HOH HOH . E 3 HOH A 27 301 57 HOH HOH . E 3 HOH A 28 302 59 HOH HOH . E 3 HOH A 29 303 60 HOH HOH . E 3 HOH A 30 304 64 HOH HOH . E 3 HOH A 31 305 68 HOH HOH . E 3 HOH A 32 306 72 HOH HOH . E 3 HOH A 33 307 74 HOH HOH . E 3 HOH A 34 308 75 HOH HOH . E 3 HOH A 35 309 78 HOH HOH . E 3 HOH A 36 310 80 HOH HOH . E 3 HOH A 37 311 82 HOH HOH . E 3 HOH A 38 312 83 HOH HOH . E 3 HOH A 39 313 89 HOH HOH . E 3 HOH A 40 314 92 HOH HOH . E 3 HOH A 41 315 94 HOH HOH . E 3 HOH A 42 316 96 HOH HOH . E 3 HOH A 43 317 97 HOH HOH . F 3 HOH B 1 275 1 HOH HOH . F 3 HOH B 2 276 7 HOH HOH . F 3 HOH B 3 277 8 HOH HOH . F 3 HOH B 4 278 9 HOH HOH . F 3 HOH B 5 279 10 HOH HOH . F 3 HOH B 6 280 12 HOH HOH . F 3 HOH B 7 281 13 HOH HOH . F 3 HOH B 8 282 14 HOH HOH . F 3 HOH B 9 283 17 HOH HOH . F 3 HOH B 10 284 18 HOH HOH . F 3 HOH B 11 285 20 HOH HOH . F 3 HOH B 12 286 22 HOH HOH . F 3 HOH B 13 287 28 HOH HOH . F 3 HOH B 14 288 29 HOH HOH . F 3 HOH B 15 289 30 HOH HOH . F 3 HOH B 16 290 32 HOH HOH . F 3 HOH B 17 291 33 HOH HOH . F 3 HOH B 18 292 34 HOH HOH . F 3 HOH B 19 293 35 HOH HOH . F 3 HOH B 20 294 41 HOH HOH . F 3 HOH B 21 295 42 HOH HOH . F 3 HOH B 22 296 43 HOH HOH . F 3 HOH B 23 297 44 HOH HOH . F 3 HOH B 24 298 45 HOH HOH . F 3 HOH B 25 299 47 HOH HOH . F 3 HOH B 26 300 50 HOH HOH . F 3 HOH B 27 301 51 HOH HOH . F 3 HOH B 28 302 52 HOH HOH . F 3 HOH B 29 303 53 HOH HOH . F 3 HOH B 30 304 55 HOH HOH . F 3 HOH B 31 305 58 HOH HOH . F 3 HOH B 32 306 61 HOH HOH . F 3 HOH B 33 307 62 HOH HOH . F 3 HOH B 34 308 63 HOH HOH . F 3 HOH B 35 309 65 HOH HOH . F 3 HOH B 36 310 66 HOH HOH . F 3 HOH B 37 311 67 HOH HOH . F 3 HOH B 38 312 69 HOH HOH . F 3 HOH B 39 313 70 HOH HOH . F 3 HOH B 40 314 71 HOH HOH . F 3 HOH B 41 315 73 HOH HOH . F 3 HOH B 42 316 76 HOH HOH . F 3 HOH B 43 317 77 HOH HOH . F 3 HOH B 44 318 79 HOH HOH . F 3 HOH B 45 319 81 HOH HOH . F 3 HOH B 46 320 84 HOH HOH . F 3 HOH B 47 321 85 HOH HOH . F 3 HOH B 48 322 86 HOH HOH . F 3 HOH B 49 323 87 HOH HOH . F 3 HOH B 50 324 88 HOH HOH . F 3 HOH B 51 325 90 HOH HOH . F 3 HOH B 52 326 91 HOH HOH . F 3 HOH B 53 327 93 HOH HOH . F 3 HOH B 54 328 95 HOH HOH . F 3 HOH B 55 329 98 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAP . . . D 2 19.358 101.641 15.236 1 17.53 ? PA NAP 274 B 1 HETATM 2 O O1A NAP . . . D 2 18.97 100.66 16.254 1 19.76 ? O1A NAP 274 B 1 HETATM 3 O O2A NAP . . . D 2 18.326 102.149 14.346 1 15.18 ? O2A NAP 274 B 1 HETATM 4 O O5B NAP . . . D 2 20.621 101.168 14.414 1 4.48 ? O5B NAP 274 B 1 HETATM 5 C C5B NAP . . . D 2 21.839 100.773 15.083 1 2.3 ? C5B NAP 274 B 1 HETATM 6 C C4B NAP . . . D 2 22.808 100.315 14.012 1 16.37 ? C4B NAP 274 B 1 HETATM 7 O O4B NAP . . . D 2 24.032 99.903 14.666 1 23.15 ? O4B NAP 274 B 1 HETATM 8 C C3B NAP . . . D 2 22.333 99.086 13.265 1 23.54 ? C3B NAP 274 B 1 HETATM 9 O O3B NAP . . . D 2 22.913 98.932 11.959 1 14.93 ? O3B NAP 274 B 1 HETATM 10 C C2B NAP . . . D 2 22.869 97.95 14.113 1 26 ? C2B NAP 274 B 1 HETATM 11 O O2B NAP . . . D 2 22.922 96.753 13.29 1 28.37 ? O2B NAP 274 B 1 HETATM 12 C C1B NAP . . . D 2 24.245 98.508 14.407 1 21.08 ? C1B NAP 274 B 1 HETATM 13 N N9A NAP . . . D 2 24.849 97.745 15.52 1 18.37 ? N9A NAP 274 B 1 HETATM 14 C C8A NAP . . . D 2 24.424 97.728 16.803 1 14.48 ? C8A NAP 274 B 1 HETATM 15 N N7A NAP . . . D 2 25.201 96.947 17.549 1 19.48 ? N7A NAP 274 B 1 HETATM 16 C C5A NAP . . . D 2 26.101 96.485 16.69 1 14.54 ? C5A NAP 274 B 1 HETATM 17 C C6A NAP . . . D 2 27.138 95.607 17.006 1 14.53 ? C6A NAP 274 B 1 HETATM 18 N N6A NAP . . . D 2 27.32 95.147 18.248 1 10.48 ? N6A NAP 274 B 1 HETATM 19 N N1A NAP . . . D 2 27.953 95.258 15.97 1 19.27 ? N1A NAP 274 B 1 HETATM 20 C C2A NAP . . . D 2 27.769 95.728 14.722 1 14.53 ? C2A NAP 274 B 1 HETATM 21 N N3A NAP . . . D 2 26.766 96.567 14.442 1 19.28 ? N3A NAP 274 B 1 HETATM 22 C C4A NAP . . . D 2 25.908 96.959 15.41 1 19.56 ? C4A NAP 274 B 1 HETATM 23 O O3 NAP . . . D 2 19.987 102.897 16 1 19.91 ? O3 NAP 274 B 1 HETATM 24 P PN NAP . . . D 2 19.982 104.481 15.776 1 14.58 ? PN NAP 274 B 1 HETATM 25 O O1N NAP . . . D 2 18.723 104.989 16.283 1 7.86 ? O1N NAP 274 B 1 HETATM 26 O O2N NAP . . . D 2 20.334 104.752 14.375 1 18.66 ? O2N NAP 274 B 1 HETATM 27 O O5D NAP . . . D 2 21.149 104.988 16.728 1 5.84 ? O5D NAP 274 B 1 HETATM 28 C C5D NAP . . . D 2 22.493 105.02 16.288 1 14.46 ? C5D NAP 274 B 1 HETATM 29 C C4D NAP . . . D 2 23.34 105.9 17.193 1 18.61 ? C4D NAP 274 B 1 HETATM 30 O O4D NAP . . . D 2 22.598 107.118 17.45 1 12.06 ? O4D NAP 274 B 1 HETATM 31 C C3D NAP . . . D 2 23.593 105.299 18.556 1 8.47 ? C3D NAP 274 B 1 HETATM 32 O O3D NAP . . . D 2 24.842 105.706 19.131 1 11.08 ? O3D NAP 274 B 1 HETATM 33 C C2D NAP . . . D 2 22.46 105.874 19.411 1 15.86 ? C2D NAP 274 B 1 HETATM 34 O O2D NAP . . . D 2 22.869 105.85 20.777 1 12.95 ? O2D NAP 274 B 1 HETATM 35 C C1D NAP . . . D 2 22.45 107.294 18.864 1 11.39 ? C1D NAP 274 B 1 HETATM 36 N N1N NAP . . . D 2 21.172 107.988 19.13 1 9.93 ? N1N NAP 274 B 1 HETATM 37 C C2N NAP . . . D 2 19.913 107.589 18.57 1 7.81 ? C2N NAP 274 B 1 HETATM 38 C C3N NAP . . . D 2 18.755 108.314 18.891 1 5.09 ? C3N NAP 274 B 1 HETATM 39 C C7N NAP . . . D 2 17.342 108.013 18.379 1 11.9 ? C7N NAP 274 B 1 HETATM 40 O O7N NAP . . . D 2 16.361 108.652 18.752 1 12.37 ? O7N NAP 274 B 1 HETATM 41 N N7N NAP . . . D 2 17.169 107.025 17.515 1 10.8 ? N7N NAP 274 B 1 HETATM 42 C C4N NAP . . . D 2 18.89 109.404 19.753 1 12.49 ? C4N NAP 274 B 1 HETATM 43 C C5N NAP . . . D 2 20.111 109.795 20.3 1 4.68 ? C5N NAP 274 B 1 HETATM 44 C C6N NAP . . . D 2 21.267 109.085 19.991 1 7.62 ? C6N NAP 274 B 1 HETATM 45 P P2B NAP . . . D 2 22.196 95.383 13.702 1 24.12 ? P2B NAP 274 B 1 HETATM 46 O O1X NAP . . . D 2 22.223 94.491 12.385 1 26.45 ? O1X NAP 274 B 1 HETATM 47 O O2X NAP . . . D 2 20.798 95.668 14.031 1 26.61 ? O2X NAP 274 B 1 HETATM 48 O O3X NAP . . . D 2 23.028 94.727 14.707 1 26.56 ? O3X NAP 274 B 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 245 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 48 #