data_1AEN # _model_server_result.job_id AcGasxR_6aFHEsgD26PBHA _model_server_result.datetime_utc '2024-11-25 16:05:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1aen # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":295}' # _entry.id 1AEN # _exptl.entry_id 1AEN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 616.487 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PROTOPORPHYRIN IX CONTAINING FE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1AEN _cell.length_a 105.2 _cell.length_b 74.3 _cell.length_c 45.4 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AEN _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 175 A HIS 175 1_555 B FE HEM . A HEM 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc2 B FE HEM . A HEM 295 1_555 D O HOH . A HOH 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? # _chem_comp.formula 'C34 H32 Fe N4 O4' _chem_comp.formula_weight 616.487 _chem_comp.id HEM _chem_comp.mon_nstd_flag . _chem_comp.name 'PROTOPORPHYRIN IX CONTAINING FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEME # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A HEM sing 143 n n CHA C4D HEM doub 144 n n CHA HHA HEM sing 145 n n CHB C4A HEM sing 146 n n CHB C1B HEM doub 147 n n CHB HHB HEM sing 148 n n CHC C4B HEM sing 149 n n CHC C1C HEM doub 150 n n CHC HHC HEM sing 151 n n CHD C4C HEM doub 152 n n CHD C1D HEM sing 153 n n CHD HHD HEM sing 154 n n C1A C2A HEM doub 155 n y C1A NA HEM sing 156 n y C2A C3A HEM sing 157 n y C2A CAA HEM sing 158 n n C3A C4A HEM doub 159 n y C3A CMA HEM sing 160 n n C4A NA HEM sing 161 n y CMA HMA HEM sing 162 n n CMA HMAA HEM sing 163 n n CMA HMAB HEM sing 164 n n CAA CBA HEM sing 165 n n CAA HAA HEM sing 166 n n CAA HAAA HEM sing 167 n n CBA CGA HEM sing 168 n n CBA HBA HEM sing 169 n n CBA HBAA HEM sing 170 n n CGA O1A HEM doub 171 n n CGA O2A HEM sing 172 n n C1B C2B HEM sing 173 n n C1B NB HEM sing 174 n n C2B C3B HEM doub 175 n n C2B CMB HEM sing 176 n n C3B C4B HEM sing 177 n n C3B CAB HEM sing 178 n n C4B NB HEM doub 179 n n CMB HMB HEM sing 180 n n CMB HMBA HEM sing 181 n n CMB HMBB HEM sing 182 n n CAB CBB HEM doub 183 n n CAB HAB HEM sing 184 n n CBB HBB HEM sing 185 n n CBB HBBA HEM sing 186 n n C1C C2C HEM sing 187 n y C1C NC HEM sing 188 n y C2C C3C HEM doub 189 n y C2C CMC HEM sing 190 n n C3C C4C HEM sing 191 n y C3C CAC HEM sing 192 n n C4C NC HEM sing 193 n y CMC HMC HEM sing 194 n n CMC HMCA HEM sing 195 n n CMC HMCB HEM sing 196 n n CAC CBC HEM doub 197 n n CAC HAC HEM sing 198 n n CBC HBC HEM sing 199 n n CBC HBCA HEM sing 200 n n C1D C2D HEM sing 201 n n C1D ND HEM doub 202 n n C2D C3D HEM doub 203 n n C2D CMD HEM sing 204 n n C3D C4D HEM sing 205 n n C3D CAD HEM sing 206 n n C4D ND HEM sing 207 n n CMD HMD HEM sing 208 n n CMD HMDA HEM sing 209 n n CMD HMDB HEM sing 210 n n CAD CBD HEM sing 211 n n CAD HAD HEM sing 212 n n CAD HADA HEM sing 213 n n CBD CGD HEM sing 214 n n CBD HBD HEM sing 215 n n CBD HBDA HEM sing 216 n n CGD O1D HEM doub 217 n n CGD O2D HEM sing 218 n n O2A H2A HEM sing 219 n n O2D H2D HEM sing 220 n n FE NA HEM sing 221 n n FE NB HEM sing 222 n n FE NC HEM sing 223 n n FE ND HEM sing 224 n n # _atom_sites.entry_id 1AEN _atom_sites.fract_transf_matrix[1][1] 0.009506 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013459 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022026 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 295 1 HEM HEM . C 3 25T A 1 296 2 25T 25T . D 4 HOH A 1 300 300 HOH HOH . D 4 HOH A 2 301 301 HOH HOH . D 4 HOH A 3 302 302 HOH HOH . D 4 HOH A 4 304 304 HOH HOH . D 4 HOH A 5 305 305 HOH HOH . D 4 HOH A 6 306 306 HOH HOH . D 4 HOH A 7 307 307 HOH HOH . D 4 HOH A 8 308 308 HOH HOH . D 4 HOH A 9 309 309 HOH HOH . D 4 HOH A 10 310 310 HOH HOH . D 4 HOH A 11 311 311 HOH HOH . D 4 HOH A 12 312 312 HOH HOH . D 4 HOH A 13 313 313 HOH HOH . D 4 HOH A 14 314 314 HOH HOH . D 4 HOH A 15 315 315 HOH HOH . D 4 HOH A 16 316 316 HOH HOH . D 4 HOH A 17 317 317 HOH HOH . D 4 HOH A 18 318 318 HOH HOH . D 4 HOH A 19 319 319 HOH HOH . D 4 HOH A 20 320 320 HOH HOH . D 4 HOH A 21 321 321 HOH HOH . D 4 HOH A 22 322 322 HOH HOH . D 4 HOH A 23 323 323 HOH HOH . D 4 HOH A 24 324 324 HOH HOH . D 4 HOH A 25 325 325 HOH HOH . D 4 HOH A 26 326 326 HOH HOH . D 4 HOH A 27 327 327 HOH HOH . D 4 HOH A 28 328 328 HOH HOH . D 4 HOH A 29 329 329 HOH HOH . D 4 HOH A 30 330 330 HOH HOH . D 4 HOH A 31 331 331 HOH HOH . D 4 HOH A 32 332 332 HOH HOH . D 4 HOH A 33 333 333 HOH HOH . D 4 HOH A 34 334 334 HOH HOH . D 4 HOH A 35 335 335 HOH HOH . D 4 HOH A 36 336 336 HOH HOH . D 4 HOH A 37 337 337 HOH HOH . D 4 HOH A 38 338 338 HOH HOH . D 4 HOH A 39 339 339 HOH HOH . D 4 HOH A 40 340 340 HOH HOH . D 4 HOH A 41 341 341 HOH HOH . D 4 HOH A 42 342 342 HOH HOH . D 4 HOH A 43 344 344 HOH HOH . D 4 HOH A 44 345 345 HOH HOH . D 4 HOH A 45 346 346 HOH HOH . D 4 HOH A 46 347 347 HOH HOH . D 4 HOH A 47 348 348 HOH HOH . D 4 HOH A 48 349 349 HOH HOH . D 4 HOH A 49 350 350 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA HEM . . . B 2 -5.571 53.99 113.021 1 5.92 ? CHA HEM 295 A 1 HETATM 2 C CHB HEM . . . B 2 -7.528 58.145 114.442 1 6.24 ? CHB HEM 295 A 1 HETATM 3 C CHC HEM . . . B 2 -5.87 60.311 110.503 1 6.19 ? CHC HEM 295 A 1 HETATM 4 C CHD HEM . . . B 2 -3.572 56.298 109.383 1 4.49 ? CHD HEM 295 A 1 HETATM 5 C C1A HEM . . . B 2 -6.286 54.934 113.786 1 9.39 ? C1A HEM 295 A 1 HETATM 6 C C2A HEM . . . B 2 -6.83 54.676 115.016 1 9.14 ? C2A HEM 295 A 1 HETATM 7 C C3A HEM . . . B 2 -7.411 55.864 115.444 1 5.58 ? C3A HEM 295 A 1 HETATM 8 C C4A HEM . . . B 2 -7.163 56.779 114.446 1 7.88 ? C4A HEM 295 A 1 HETATM 9 C CMA HEM . . . B 2 -8.143 56.075 116.778 1 6.19 ? CMA HEM 295 A 1 HETATM 10 C CAA HEM . . . B 2 -6.746 53.334 115.74 1 10.65 ? CAA HEM 295 A 1 HETATM 11 C CBA HEM . . . B 2 -5.484 53.144 116.567 1 15.05 ? CBA HEM 295 A 1 HETATM 12 C CGA HEM . . . B 2 -5.383 51.802 117.298 1 21.84 ? CGA HEM 295 A 1 HETATM 13 O O1A HEM . . . B 2 -6.213 51.472 118.149 1 22.31 ? O1A HEM 295 A 1 HETATM 14 O O2A HEM . . . B 2 -4.434 51.049 117.068 1 20.8 ? O2A HEM 295 A 1 HETATM 15 C C1B HEM . . . B 2 -7.341 59.119 113.448 1 7.98 ? C1B HEM 295 A 1 HETATM 16 C C2B HEM . . . B 2 -7.871 60.41 113.479 1 5.92 ? C2B HEM 295 A 1 HETATM 17 C C3B HEM . . . B 2 -7.436 61.003 112.289 1 5.84 ? C3B HEM 295 A 1 HETATM 18 C C4B HEM . . . B 2 -6.633 60.07 111.656 1 5.51 ? C4B HEM 295 A 1 HETATM 19 C CMB HEM . . . B 2 -8.743 60.935 114.626 1 8.6 ? CMB HEM 295 A 1 HETATM 20 C CAB HEM . . . B 2 -7.722 62.235 111.7 1 6.5 ? CAB HEM 295 A 1 HETATM 21 C CBB HEM . . . B 2 -8.697 63.188 112.12 1 8.74 ? CBB HEM 295 A 1 HETATM 22 C C1C HEM . . . B 2 -5.035 59.414 109.825 1 11.06 ? C1C HEM 295 A 1 HETATM 23 C C2C HEM . . . B 2 -4.276 59.73 108.704 1 10.9 ? C2C HEM 295 A 1 HETATM 24 C C3C HEM . . . B 2 -3.578 58.55 108.426 1 8.97 ? C3C HEM 295 A 1 HETATM 25 C C4C HEM . . . B 2 -3.99 57.621 109.358 1 10.89 ? C4C HEM 295 A 1 HETATM 26 C CMC HEM . . . B 2 -4.177 61.129 108.054 1 7.93 ? CMC HEM 295 A 1 HETATM 27 C CAC HEM . . . B 2 -2.653 58.24 107.417 1 12 ? CAC HEM 295 A 1 HETATM 28 C CBC HEM . . . B 2 -2.278 59.055 106.305 1 11.74 ? CBC HEM 295 A 1 HETATM 29 C C1D HEM . . . B 2 -3.909 55.287 110.235 1 8.04 ? C1D HEM 295 A 1 HETATM 30 C C2D HEM . . . B 2 -3.611 53.959 110.002 1 8.81 ? C2D HEM 295 A 1 HETATM 31 C C3D HEM . . . B 2 -4.237 53.241 111.021 1 7.1 ? C3D HEM 295 A 1 HETATM 32 C C4D HEM . . . B 2 -4.843 54.21 111.836 1 7.71 ? C4D HEM 295 A 1 HETATM 33 C CMD HEM . . . B 2 -2.901 53.374 108.795 1 9.16 ? CMD HEM 295 A 1 HETATM 34 C CAD HEM . . . B 2 -4.195 51.712 111.171 1 9.8 ? CAD HEM 295 A 1 HETATM 35 C CBD HEM . . . B 2 -3.145 51.299 112.218 1 11.6 ? CBD HEM 295 A 1 HETATM 36 C CGD HEM . . . B 2 -3.02 49.829 112.62 1 13.01 ? CGD HEM 295 A 1 HETATM 37 O O1D HEM . . . B 2 -2.375 49.529 113.623 1 14.76 ? O1D HEM 295 A 1 HETATM 38 O O2D HEM . . . B 2 -3.556 48.963 111.94 1 9.51 ? O2D HEM 295 A 1 HETATM 39 N NA HEM . . . B 2 -6.514 56.206 113.435 1 8.84 ? NA HEM 295 A 1 HETATM 40 N NB HEM . . . B 2 -6.674 58.899 112.297 1 8.69 ? NB HEM 295 A 1 HETATM 41 N NC HEM . . . B 2 -4.865 58.132 110.21 1 9.88 ? NC HEM 295 A 1 HETATM 42 N ND HEM . . . B 2 -4.642 55.443 111.336 1 11.12 ? ND HEM 295 A 1 HETATM 43 FE FE HEM . . . B 2 -5.699 57.157 111.785 1 11.76 ? FE HEM 295 A 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 43 #