data_1AG0
#
_model_server_result.job_id            tUuN9vx0iMQZPBG2qVNYuw 
_model_server_result.datetime_utc      '2024-11-24 16:12:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1ag0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":131}' 
#
_entry.id    1AG0 
#
_exptl.entry_id    1AG0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              63.546 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'COPPER (II) ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94 
_cell.angle_gamma         90 
_cell.entry_id            1AG0 
_cell.length_a            56.5 
_cell.length_b            48.9 
_cell.length_c            95.5 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1AG0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 4 A CYS 4 1_555 A SG CYS 27 A CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
disulf ? disulf2 B SG CYS 4 B CYS 4 1_555 B SG CYS 27 B CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? 
metalc ? metalc1 A N ALA 2 A ALA 2 1_555 D CU CU . A CU 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? 
metalc ? metalc2 A O ALA 2 A ALA 2 1_555 D CU CU . A CU 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? 
metalc ? metalc3 A O GLY 46 A GLY 46 1_555 C CU CU . A CU 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.62 ? 
metalc ? metalc4 A ND1 HIS 47 A HIS 47 1_555 C CU CU . A CU 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? 
metalc ? metalc5 A OD2 ASP 113 A ASP 113 1_555 C CU CU . A CU 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.874 ? 
metalc ? metalc6 A OD1 ASP 113 A ASP 113 1_555 C CU CU . A CU 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? 
metalc ? metalc7 A ND1 HIS 118 A HIS 118 1_555 C CU CU . A CU 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? 
metalc ? metalc8 D CU CU . A CU 131 1_555 G O HOH . A HOH 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? 
metalc ? metalc9 B N ALA 2 B ALA 2 1_555 F CU CU . B CU 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.091 ? 
metalc ? metalc10 B O ALA 2 B ALA 2 1_555 F CU CU . B CU 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? 
metalc ? metalc11 B O GLY 46 B GLY 46 1_555 E CU CU . B CU 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.622 ? 
metalc ? metalc12 B ND1 HIS 47 B HIS 47 1_555 E CU CU . B CU 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? 
metalc ? metalc13 B OD2 ASP 113 B ASP 113 1_555 E CU CU . B CU 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.874 ? 
metalc ? metalc14 B OD1 ASP 113 B ASP 113 1_555 E CU CU . B CU 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? 
metalc ? metalc15 B ND1 HIS 118 B HIS 118 1_555 E CU CU . B CU 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
metalc ? metalc16 F CU CU . B CU 131 1_555 H O HOH . B HOH 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? 
#
_chem_comp.formula           'Cu 2' 
_chem_comp.formula_weight    63.546 
_chem_comp.id                CU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'COPPER (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1AG0 
_atom_sites.fract_transf_matrix[1][1]    0.017699 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001238 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.02045 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010497 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CU A 1 130 130 CU CU . 
D 2 CU A 1 131 131 CU CU . 
E 2 CU B 1 130 130 CU CU . 
F 2 CU B 1 131 131 CU CU . 
G 3 HOH A 1 132 132 HOH HOH . 
G 3 HOH A 2 133 133 HOH HOH . 
G 3 HOH A 3 134 134 HOH HOH . 
G 3 HOH A 4 135 135 HOH HOH . 
G 3 HOH A 5 136 136 HOH HOH . 
G 3 HOH A 6 137 137 HOH HOH . 
G 3 HOH A 7 138 138 HOH HOH . 
G 3 HOH A 8 139 139 HOH HOH . 
G 3 HOH A 9 140 140 HOH HOH . 
G 3 HOH A 10 141 141 HOH HOH . 
G 3 HOH A 11 142 142 HOH HOH . 
G 3 HOH A 12 143 143 HOH HOH . 
G 3 HOH A 13 144 144 HOH HOH . 
G 3 HOH A 14 145 145 HOH HOH . 
G 3 HOH A 15 146 146 HOH HOH . 
G 3 HOH A 16 147 147 HOH HOH . 
G 3 HOH A 17 148 148 HOH HOH . 
G 3 HOH A 18 149 149 HOH HOH . 
G 3 HOH A 19 150 150 HOH HOH . 
G 3 HOH A 20 151 151 HOH HOH . 
G 3 HOH A 21 152 152 HOH HOH . 
G 3 HOH A 22 153 153 HOH HOH . 
G 3 HOH A 23 154 154 HOH HOH . 
G 3 HOH A 24 155 155 HOH HOH . 
G 3 HOH A 25 156 156 HOH HOH . 
G 3 HOH A 26 157 157 HOH HOH . 
G 3 HOH A 27 158 158 HOH HOH . 
G 3 HOH A 28 159 159 HOH HOH . 
G 3 HOH A 29 160 160 HOH HOH . 
G 3 HOH A 30 161 161 HOH HOH . 
G 3 HOH A 31 162 162 HOH HOH . 
G 3 HOH A 32 163 163 HOH HOH . 
G 3 HOH A 33 164 164 HOH HOH . 
G 3 HOH A 34 165 165 HOH HOH . 
G 3 HOH A 35 166 166 HOH HOH . 
G 3 HOH A 36 167 167 HOH HOH . 
G 3 HOH A 37 168 168 HOH HOH . 
G 3 HOH A 38 169 169 HOH HOH . 
G 3 HOH A 39 170 170 HOH HOH . 
G 3 HOH A 40 171 171 HOH HOH . 
G 3 HOH A 41 172 172 HOH HOH . 
H 3 HOH B 1 132 132 HOH HOH . 
H 3 HOH B 2 133 133 HOH HOH . 
H 3 HOH B 3 134 134 HOH HOH . 
H 3 HOH B 4 135 135 HOH HOH . 
H 3 HOH B 5 136 136 HOH HOH . 
H 3 HOH B 6 137 137 HOH HOH . 
H 3 HOH B 7 138 138 HOH HOH . 
H 3 HOH B 8 139 139 HOH HOH . 
H 3 HOH B 9 140 140 HOH HOH . 
H 3 HOH B 10 141 141 HOH HOH . 
H 3 HOH B 11 142 142 HOH HOH . 
H 3 HOH B 12 143 143 HOH HOH . 
H 3 HOH B 13 144 144 HOH HOH . 
H 3 HOH B 14 145 145 HOH HOH . 
H 3 HOH B 15 146 146 HOH HOH . 
H 3 HOH B 16 147 147 HOH HOH . 
H 3 HOH B 17 148 148 HOH HOH . 
H 3 HOH B 18 149 149 HOH HOH . 
H 3 HOH B 19 150 150 HOH HOH . 
H 3 HOH B 20 151 151 HOH HOH . 
H 3 HOH B 21 152 152 HOH HOH . 
H 3 HOH B 22 153 153 HOH HOH . 
H 3 HOH B 23 154 154 HOH HOH . 
H 3 HOH B 24 155 155 HOH HOH . 
H 3 HOH B 25 156 156 HOH HOH . 
H 3 HOH B 26 157 157 HOH HOH . 
H 3 HOH B 27 158 158 HOH HOH . 
H 3 HOH B 28 159 159 HOH HOH . 
H 3 HOH B 29 160 160 HOH HOH . 
H 3 HOH B 30 161 161 HOH HOH . 
H 3 HOH B 31 162 162 HOH HOH . 
H 3 HOH B 32 163 163 HOH HOH . 
H 3 HOH B 33 164 164 HOH HOH . 
H 3 HOH B 34 165 165 HOH HOH . 
H 3 HOH B 35 166 166 HOH HOH . 
H 3 HOH B 36 167 167 HOH HOH . 
H 3 HOH B 37 168 168 HOH HOH . 
H 3 HOH B 38 169 169 HOH HOH . 
H 3 HOH B 39 170 170 HOH HOH . 
H 3 HOH B 40 171 171 HOH HOH . 
H 3 HOH B 41 172 172 HOH HOH . 
H 3 HOH B 42 173 173 HOH HOH . 
H 3 HOH B 43 174 174 HOH HOH . 
H 3 HOH B 44 175 175 HOH HOH . 
H 3 HOH B 45 176 176 HOH HOH . 
H 3 HOH B 46 177 177 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CU 
_atom_site.label_atom_id         CU 
_atom_site.label_comp_id         CU 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         F 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               12.259 
_atom_site.Cartn_y               11.066 
_atom_site.Cartn_z               50.88 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        28.83 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CU 
_atom_site.auth_comp_id          CU 
_atom_site.auth_seq_id           131 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              48 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           301 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#