data_1AHH # _model_server_result.job_id 2dkxABuhG3NP9U7sUO7Xfw _model_server_result.datetime_utc '2025-02-27 07:02:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ahh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":256}' # _entry.id 1AHH # _exptl.entry_id 1AHH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 663.425 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1AHH _cell.length_a 81.66 _cell.length_b 81.66 _cell.length_c 214.6 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AHH _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 237 n n PA O2A NAD sing 238 n n PA O5B NAD sing 239 n n PA O3 NAD sing 240 n n O2A HOA2 NAD sing 241 n n O5B C5B NAD sing 242 n n C5B C4B NAD sing 243 n n C5B H51A NAD sing 244 n n C5B H52A NAD sing 245 n n C4B O4B NAD sing 246 n n C4B C3B NAD sing 247 n n C4B H4B NAD sing 248 n n O4B C1B NAD sing 249 n n C3B O3B NAD sing 250 n n C3B C2B NAD sing 251 n n C3B H3B NAD sing 252 n n O3B HO3A NAD sing 253 n n C2B O2B NAD sing 254 n n C2B C1B NAD sing 255 n n C2B H2B NAD sing 256 n n O2B HO2A NAD sing 257 n n C1B N9A NAD sing 258 n n C1B H1B NAD sing 259 n n N9A C8A NAD sing 260 n y N9A C4A NAD sing 261 n y C8A N7A NAD doub 262 n y C8A H8A NAD sing 263 n n N7A C5A NAD sing 264 n y C5A C6A NAD sing 265 n y C5A C4A NAD doub 266 n y C6A N6A NAD sing 267 n n C6A N1A NAD doub 268 n y N6A H61A NAD sing 269 n n N6A H62A NAD sing 270 n n N1A C2A NAD sing 271 n y C2A N3A NAD doub 272 n y C2A H2A NAD sing 273 n n N3A C4A NAD sing 274 n y O3 PN NAD sing 275 n n PN O1N NAD doub 276 n n PN O2N NAD sing 277 n n PN O5D NAD sing 278 n n O5D C5D NAD sing 279 n n C5D C4D NAD sing 280 n n C5D H51N NAD sing 281 n n C5D H52N NAD sing 282 n n C4D O4D NAD sing 283 n n C4D C3D NAD sing 284 n n C4D H4D NAD sing 285 n n O4D C1D NAD sing 286 n n C3D O3D NAD sing 287 n n C3D C2D NAD sing 288 n n C3D H3D NAD sing 289 n n O3D HO3N NAD sing 290 n n C2D O2D NAD sing 291 n n C2D C1D NAD sing 292 n n C2D H2D NAD sing 293 n n O2D HO2N NAD sing 294 n n C1D N1N NAD sing 295 n n C1D H1D NAD sing 296 n n N1N C2N NAD sing 297 n y N1N C6N NAD doub 298 n y C2N C3N NAD doub 299 n y C2N H2N NAD sing 300 n n C3N C7N NAD sing 301 n n C3N C4N NAD sing 302 n y C7N O7N NAD doub 303 n n C7N N7N NAD sing 304 n n N7N H71N NAD sing 305 n n N7N H72N NAD sing 306 n n C4N C5N NAD doub 307 n y C4N H4N NAD sing 308 n n C5N C6N NAD sing 309 n y C5N H5N NAD sing 310 n n C6N H6N NAD sing 311 n n # _atom_sites.entry_id 1AHH _atom_sites.fract_transf_matrix[1][1] 0.012246 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012246 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00466 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAD A 1 256 256 NAD NAD . D 2 NAD B 1 256 256 NAD NAD . E 3 HOH A 1 257 1 HOH HOH . E 3 HOH A 2 258 2 HOH HOH . E 3 HOH A 3 259 3 HOH HOH . E 3 HOH A 4 260 4 HOH HOH . E 3 HOH A 5 261 5 HOH HOH . E 3 HOH A 6 262 9 HOH HOH . E 3 HOH A 7 263 14 HOH HOH . E 3 HOH A 8 264 15 HOH HOH . E 3 HOH A 9 265 17 HOH HOH . E 3 HOH A 10 266 18 HOH HOH . E 3 HOH A 11 267 19 HOH HOH . E 3 HOH A 12 268 21 HOH HOH . E 3 HOH A 13 269 22 HOH HOH . E 3 HOH A 14 270 23 HOH HOH . E 3 HOH A 15 271 25 HOH HOH . E 3 HOH A 16 272 28 HOH HOH . E 3 HOH A 17 273 29 HOH HOH . E 3 HOH A 18 274 32 HOH HOH . E 3 HOH A 19 275 34 HOH HOH . E 3 HOH A 20 276 35 HOH HOH . E 3 HOH A 21 277 36 HOH HOH . E 3 HOH A 22 278 38 HOH HOH . E 3 HOH A 23 279 40 HOH HOH . E 3 HOH A 24 280 41 HOH HOH . E 3 HOH A 25 281 43 HOH HOH . E 3 HOH A 26 282 46 HOH HOH . E 3 HOH A 27 283 47 HOH HOH . E 3 HOH A 28 284 48 HOH HOH . E 3 HOH A 29 285 49 HOH HOH . E 3 HOH A 30 286 52 HOH HOH . E 3 HOH A 31 287 53 HOH HOH . E 3 HOH A 32 288 54 HOH HOH . E 3 HOH A 33 289 58 HOH HOH . E 3 HOH A 34 290 60 HOH HOH . E 3 HOH A 35 291 61 HOH HOH . E 3 HOH A 36 292 63 HOH HOH . E 3 HOH A 37 293 64 HOH HOH . E 3 HOH A 38 294 67 HOH HOH . E 3 HOH A 39 295 68 HOH HOH . E 3 HOH A 40 296 72 HOH HOH . E 3 HOH A 41 297 79 HOH HOH . E 3 HOH A 42 298 82 HOH HOH . E 3 HOH A 43 299 83 HOH HOH . E 3 HOH A 44 300 86 HOH HOH . E 3 HOH A 45 301 90 HOH HOH . E 3 HOH A 46 302 95 HOH HOH . E 3 HOH A 47 303 96 HOH HOH . E 3 HOH A 48 304 97 HOH HOH . E 3 HOH A 49 305 98 HOH HOH . F 3 HOH B 1 257 6 HOH HOH . F 3 HOH B 2 258 7 HOH HOH . F 3 HOH B 3 259 8 HOH HOH . F 3 HOH B 4 260 10 HOH HOH . F 3 HOH B 5 261 11 HOH HOH . F 3 HOH B 6 262 12 HOH HOH . F 3 HOH B 7 263 13 HOH HOH . F 3 HOH B 8 264 16 HOH HOH . F 3 HOH B 9 265 20 HOH HOH . F 3 HOH B 10 266 24 HOH HOH . F 3 HOH B 11 267 26 HOH HOH . F 3 HOH B 12 268 27 HOH HOH . F 3 HOH B 13 269 30 HOH HOH . F 3 HOH B 14 270 31 HOH HOH . F 3 HOH B 15 271 33 HOH HOH . F 3 HOH B 16 272 37 HOH HOH . F 3 HOH B 17 273 39 HOH HOH . F 3 HOH B 18 274 42 HOH HOH . F 3 HOH B 19 275 44 HOH HOH . F 3 HOH B 20 276 45 HOH HOH . F 3 HOH B 21 277 50 HOH HOH . F 3 HOH B 22 278 51 HOH HOH . F 3 HOH B 23 279 55 HOH HOH . F 3 HOH B 24 280 56 HOH HOH . F 3 HOH B 25 281 57 HOH HOH . F 3 HOH B 26 282 59 HOH HOH . F 3 HOH B 27 283 62 HOH HOH . F 3 HOH B 28 284 65 HOH HOH . F 3 HOH B 29 285 66 HOH HOH . F 3 HOH B 30 286 69 HOH HOH . F 3 HOH B 31 287 70 HOH HOH . F 3 HOH B 32 288 71 HOH HOH . F 3 HOH B 33 289 73 HOH HOH . F 3 HOH B 34 290 74 HOH HOH . F 3 HOH B 35 291 75 HOH HOH . F 3 HOH B 36 292 76 HOH HOH . F 3 HOH B 37 293 77 HOH HOH . F 3 HOH B 38 294 78 HOH HOH . F 3 HOH B 39 295 80 HOH HOH . F 3 HOH B 40 296 81 HOH HOH . F 3 HOH B 41 297 84 HOH HOH . F 3 HOH B 42 298 85 HOH HOH . F 3 HOH B 43 299 87 HOH HOH . F 3 HOH B 44 300 88 HOH HOH . F 3 HOH B 45 301 89 HOH HOH . F 3 HOH B 46 302 91 HOH HOH . F 3 HOH B 47 303 92 HOH HOH . F 3 HOH B 48 304 93 HOH HOH . F 3 HOH B 49 305 94 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . D 2 25.007 9.711 -22.248 1 55.9 ? PA NAD 256 B 1 HETATM 2 O O1A NAD . . . D 2 25.228 8.484 -21.428 1 51.7 ? O1A NAD 256 B 1 HETATM 3 O O2A NAD . . . D 2 23.884 9.823 -23.234 1 51.21 ? O2A NAD 256 B 1 HETATM 4 O O5B NAD . . . D 2 26.422 10.07 -22.952 1 49.97 ? O5B NAD 256 B 1 HETATM 5 C C5B NAD . . . D 2 26.417 11.083 -23.964 1 43.36 ? C5B NAD 256 B 1 HETATM 6 C C4B NAD . . . D 2 27.396 10.702 -25.034 1 38.33 ? C4B NAD 256 B 1 HETATM 7 O O4B NAD . . . D 2 28.684 10.563 -24.401 1 36.07 ? O4B NAD 256 B 1 HETATM 8 C C3B NAD . . . D 2 27.019 9.35 -25.6 1 37.13 ? C3B NAD 256 B 1 HETATM 9 O O3B NAD . . . D 2 27.008 9.354 -27.034 1 44.44 ? O3B NAD 256 B 1 HETATM 10 C C2B NAD . . . D 2 28.161 8.477 -25.097 1 34.23 ? C2B NAD 256 B 1 HETATM 11 O O2B NAD . . . D 2 28.382 7.418 -26.007 1 29.68 ? O2B NAD 256 B 1 HETATM 12 C C1B NAD . . . D 2 29.311 9.451 -25.035 1 33.37 ? C1B NAD 256 B 1 HETATM 13 N N9A NAD . . . D 2 30.481 9.034 -24.238 1 33.18 ? N9A NAD 256 B 1 HETATM 14 C C8A NAD . . . D 2 30.427 8.235 -23.165 1 34.12 ? C8A NAD 256 B 1 HETATM 15 N N7A NAD . . . D 2 31.635 8.026 -22.642 1 32.02 ? N7A NAD 256 B 1 HETATM 16 C C5A NAD . . . D 2 32.432 8.724 -23.422 1 29.56 ? C5A NAD 256 B 1 HETATM 17 C C6A NAD . . . D 2 33.806 8.8 -23.226 1 29.49 ? C6A NAD 256 B 1 HETATM 18 N N6A NAD . . . D 2 34.419 8.109 -22.265 1 23.23 ? N6A NAD 256 B 1 HETATM 19 N N1A NAD . . . D 2 34.454 9.589 -24.102 1 27.88 ? N1A NAD 256 B 1 HETATM 20 C C2A NAD . . . D 2 33.782 10.226 -25.079 1 25.02 ? C2A NAD 256 B 1 HETATM 21 N N3A NAD . . . D 2 32.475 10.139 -25.273 1 18.72 ? N3A NAD 256 B 1 HETATM 22 C C4A NAD . . . D 2 31.757 9.374 -24.431 1 28.93 ? C4A NAD 256 B 1 HETATM 23 O O3 NAD . . . D 2 24.894 10.98 -21.271 1 56.56 ? O3 NAD 256 B 1 HETATM 24 P PN NAD . . . D 2 23.777 11.921 -20.61 1 51.49 ? PN NAD 256 B 1 HETATM 25 O O1N NAD . . . D 2 22.876 11.03 -19.816 1 57.46 ? O1N NAD 256 B 1 HETATM 26 O O2N NAD . . . D 2 23.187 12.94 -21.537 1 51 ? O2N NAD 256 B 1 HETATM 27 O O5D NAD . . . D 2 24.848 12.67 -19.67 1 47.65 ? O5D NAD 256 B 1 HETATM 28 C C5D NAD . . . D 2 25.834 13.514 -20.288 1 35.12 ? C5D NAD 256 B 1 HETATM 29 C C4D NAD . . . D 2 26.404 14.446 -19.244 1 32.3 ? C4D NAD 256 B 1 HETATM 30 O O4D NAD . . . D 2 25.296 15.061 -18.569 1 34.46 ? O4D NAD 256 B 1 HETATM 31 C C3D NAD . . . D 2 27.225 13.753 -18.176 1 27.27 ? C3D NAD 256 B 1 HETATM 32 O O3D NAD . . . D 2 28.202 14.689 -17.763 1 27.91 ? O3D NAD 256 B 1 HETATM 33 C C2D NAD . . . D 2 26.254 13.478 -17.051 1 27.27 ? C2D NAD 256 B 1 HETATM 34 O O2D NAD . . . D 2 26.851 13.54 -15.769 1 29.36 ? O2D NAD 256 B 1 HETATM 35 C C1D NAD . . . D 2 25.41 14.704 -17.173 1 34.54 ? C1D NAD 256 B 1 HETATM 36 N N1N NAD . . . D 2 24.12 14.472 -16.513 1 32.12 ? N1N NAD 256 B 1 HETATM 37 C C2N NAD . . . D 2 23.006 13.942 -17.206 1 31.2 ? C2N NAD 256 B 1 HETATM 38 C C3N NAD . . . D 2 21.762 13.821 -16.571 1 30.17 ? C3N NAD 256 B 1 HETATM 39 C C7N NAD . . . D 2 20.504 13.237 -17.264 1 28.88 ? C7N NAD 256 B 1 HETATM 40 O O7N NAD . . . D 2 19.46 13.031 -16.647 1 28.87 ? O7N NAD 256 B 1 HETATM 41 N N7N NAD . . . D 2 20.574 12.987 -18.56 1 27.63 ? N7N NAD 256 B 1 HETATM 42 C C4N NAD . . . D 2 21.669 14.241 -15.248 1 26.71 ? C4N NAD 256 B 1 HETATM 43 C C5N NAD . . . D 2 22.785 14.756 -14.573 1 34.91 ? C5N NAD 256 B 1 HETATM 44 C C6N NAD . . . D 2 24.028 14.877 -15.188 1 29.15 ? C6N NAD 256 B 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 44 #