data_1AHI # _model_server_result.job_id emePAzfyt-X8K0baXyrdhA _model_server_result.datetime_utc '2024-12-14 21:55:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ahi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 1AHI # _exptl.entry_id 1AHI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 665.441 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1AHI _cell.length_a 81.59 _cell.length_b 81.59 _cell.length_c 214.65 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AHI _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C21 H29 N7 O14 P2' _chem_comp.formula_weight 665.441 _chem_comp.id NAI _chem_comp.mon_nstd_flag . _chem_comp.name '1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms NADH # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAI doub 315 n n PA O2A NAI sing 316 n n PA O5B NAI sing 317 n n PA O3 NAI sing 318 n n O2A HOA2 NAI sing 319 n n O5B C5B NAI sing 320 n n C5B C4B NAI sing 321 n n C5B H51A NAI sing 322 n n C5B H52A NAI sing 323 n n C4B O4B NAI sing 324 n n C4B C3B NAI sing 325 n n C4B H4B NAI sing 326 n n O4B C1B NAI sing 327 n n C3B O3B NAI sing 328 n n C3B C2B NAI sing 329 n n C3B H3B NAI sing 330 n n O3B HO3A NAI sing 331 n n C2B O2B NAI sing 332 n n C2B C1B NAI sing 333 n n C2B H2B NAI sing 334 n n O2B HO2A NAI sing 335 n n C1B N9A NAI sing 336 n n C1B H1B NAI sing 337 n n N9A C8A NAI sing 338 n y N9A C4A NAI sing 339 n y C8A N7A NAI doub 340 n y C8A H8A NAI sing 341 n n N7A C5A NAI sing 342 n y C5A C6A NAI sing 343 n y C5A C4A NAI doub 344 n y C6A N6A NAI sing 345 n n C6A N1A NAI doub 346 n y N6A H61A NAI sing 347 n n N6A H62A NAI sing 348 n n N1A C2A NAI sing 349 n y C2A N3A NAI doub 350 n y C2A H2A NAI sing 351 n n N3A C4A NAI sing 352 n y O3 PN NAI sing 353 n n PN O1N NAI sing 354 n n PN O2N NAI doub 355 n n PN O5D NAI sing 356 n n O1N HO1N NAI sing 357 n n O5D C5D NAI sing 358 n n C5D C4D NAI sing 359 n n C5D H51N NAI sing 360 n n C5D H52N NAI sing 361 n n C4D O4D NAI sing 362 n n C4D C3D NAI sing 363 n n C4D H4D NAI sing 364 n n O4D C1D NAI sing 365 n n C3D O3D NAI sing 366 n n C3D C2D NAI sing 367 n n C3D H3D NAI sing 368 n n O3D HO3N NAI sing 369 n n C2D O2D NAI sing 370 n n C2D C1D NAI sing 371 n n C2D H2D NAI sing 372 n n O2D HO2N NAI sing 373 n n C1D N1N NAI sing 374 n n C1D H1D NAI sing 375 n n N1N C2N NAI sing 376 n n N1N C6N NAI sing 377 n n C2N C3N NAI doub 378 n n C2N H2N NAI sing 379 n n C3N C7N NAI sing 380 n n C3N C4N NAI sing 381 n n C7N O7N NAI doub 382 n n C7N N7N NAI sing 383 n n N7N H71N NAI sing 384 n n N7N H72N NAI sing 385 n n C4N C5N NAI sing 386 n n C4N H4N NAI sing 387 n n C4N H42N NAI sing 388 n n C5N C6N NAI doub 389 n n C5N H5N NAI sing 390 n n C6N H6N NAI sing 391 n n # _atom_sites.entry_id 1AHI _atom_sites.fract_transf_matrix[1][1] 0.012256 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012256 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004659 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CHO A 1 301 257 CHO CHO . D 3 NAI A 1 302 256 NAI NAD . E 2 CHO B 1 301 257 CHO CHO . F 3 NAI B 1 302 256 NAI NAD . G 4 HOH A 1 401 1 HOH HOH . G 4 HOH A 2 402 3 HOH HOH . G 4 HOH A 3 403 7 HOH HOH . G 4 HOH A 4 404 9 HOH HOH . G 4 HOH A 5 405 10 HOH HOH . G 4 HOH A 6 406 12 HOH HOH . G 4 HOH A 7 407 13 HOH HOH . G 4 HOH A 8 408 16 HOH HOH . G 4 HOH A 9 409 19 HOH HOH . G 4 HOH A 10 410 20 HOH HOH . G 4 HOH A 11 411 24 HOH HOH . G 4 HOH A 12 412 25 HOH HOH . G 4 HOH A 13 413 26 HOH HOH . G 4 HOH A 14 414 28 HOH HOH . G 4 HOH A 15 415 29 HOH HOH . G 4 HOH A 16 416 30 HOH HOH . G 4 HOH A 17 417 37 HOH HOH . G 4 HOH A 18 418 38 HOH HOH . G 4 HOH A 19 419 39 HOH HOH . G 4 HOH A 20 420 40 HOH HOH . G 4 HOH A 21 421 43 HOH HOH . G 4 HOH A 22 422 45 HOH HOH . G 4 HOH A 23 423 46 HOH HOH . G 4 HOH A 24 424 50 HOH HOH . G 4 HOH A 25 425 55 HOH HOH . G 4 HOH A 26 426 56 HOH HOH . G 4 HOH A 27 427 57 HOH HOH . G 4 HOH A 28 428 62 HOH HOH . G 4 HOH A 29 429 63 HOH HOH . G 4 HOH A 30 430 64 HOH HOH . G 4 HOH A 31 431 66 HOH HOH . G 4 HOH A 32 432 69 HOH HOH . G 4 HOH A 33 433 70 HOH HOH . G 4 HOH A 34 434 71 HOH HOH . G 4 HOH A 35 435 73 HOH HOH . G 4 HOH A 36 436 77 HOH HOH . G 4 HOH A 37 437 80 HOH HOH . G 4 HOH A 38 438 82 HOH HOH . G 4 HOH A 39 439 84 HOH HOH . G 4 HOH A 40 440 85 HOH HOH . G 4 HOH A 41 441 87 HOH HOH . G 4 HOH A 42 442 89 HOH HOH . G 4 HOH A 43 443 90 HOH HOH . G 4 HOH A 44 444 92 HOH HOH . G 4 HOH A 45 445 94 HOH HOH . G 4 HOH A 46 446 95 HOH HOH . G 4 HOH A 47 447 96 HOH HOH . G 4 HOH A 48 448 99 HOH HOH . G 4 HOH A 49 449 103 HOH HOH . H 4 HOH B 1 401 2 HOH HOH . H 4 HOH B 2 402 4 HOH HOH . H 4 HOH B 3 403 5 HOH HOH . H 4 HOH B 4 404 6 HOH HOH . H 4 HOH B 5 405 8 HOH HOH . H 4 HOH B 6 406 11 HOH HOH . H 4 HOH B 7 407 14 HOH HOH . H 4 HOH B 8 408 15 HOH HOH . H 4 HOH B 9 409 17 HOH HOH . H 4 HOH B 10 410 18 HOH HOH . H 4 HOH B 11 411 21 HOH HOH . H 4 HOH B 12 412 22 HOH HOH . H 4 HOH B 13 413 23 HOH HOH . H 4 HOH B 14 414 27 HOH HOH . H 4 HOH B 15 415 31 HOH HOH . H 4 HOH B 16 416 32 HOH HOH . H 4 HOH B 17 417 33 HOH HOH . H 4 HOH B 18 418 34 HOH HOH . H 4 HOH B 19 419 35 HOH HOH . H 4 HOH B 20 420 36 HOH HOH . H 4 HOH B 21 421 41 HOH HOH . H 4 HOH B 22 422 42 HOH HOH . H 4 HOH B 23 423 44 HOH HOH . H 4 HOH B 24 424 47 HOH HOH . H 4 HOH B 25 425 48 HOH HOH . H 4 HOH B 26 426 49 HOH HOH . H 4 HOH B 27 427 51 HOH HOH . H 4 HOH B 28 428 52 HOH HOH . H 4 HOH B 29 429 53 HOH HOH . H 4 HOH B 30 430 54 HOH HOH . H 4 HOH B 31 431 58 HOH HOH . H 4 HOH B 32 432 59 HOH HOH . H 4 HOH B 33 433 60 HOH HOH . H 4 HOH B 34 434 61 HOH HOH . H 4 HOH B 35 435 65 HOH HOH . H 4 HOH B 36 436 67 HOH HOH . H 4 HOH B 37 437 68 HOH HOH . H 4 HOH B 38 438 72 HOH HOH . H 4 HOH B 39 439 74 HOH HOH . H 4 HOH B 40 440 75 HOH HOH . H 4 HOH B 41 441 76 HOH HOH . H 4 HOH B 42 442 78 HOH HOH . H 4 HOH B 43 443 79 HOH HOH . H 4 HOH B 44 444 81 HOH HOH . H 4 HOH B 45 445 83 HOH HOH . H 4 HOH B 46 446 86 HOH HOH . H 4 HOH B 47 447 88 HOH HOH . H 4 HOH B 48 448 91 HOH HOH . H 4 HOH B 49 449 93 HOH HOH . H 4 HOH B 50 450 97 HOH HOH . H 4 HOH B 51 451 98 HOH HOH . H 4 HOH B 52 452 100 HOH HOH . H 4 HOH B 53 453 101 HOH HOH . H 4 HOH B 54 454 102 HOH HOH . H 4 HOH B 55 455 104 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAI . . . D 3 52.564 19.381 7.985 1 69.81 ? PA NAI 302 A 1 HETATM 2 O O1A NAI . . . D 3 53.115 19.222 6.609 1 72.53 ? O1A NAI 302 A 1 HETATM 3 O O2A NAI . . . D 3 53.158 20.399 8.896 1 66.99 ? O2A NAI 302 A 1 HETATM 4 O O5B NAI . . . D 3 52.631 17.961 8.754 1 67.24 ? O5B NAI 302 A 1 HETATM 5 C C5B NAI . . . D 3 52.035 16.806 8.156 1 61.65 ? C5B NAI 302 A 1 HETATM 6 C C4B NAI . . . D 3 52.695 15.486 8.535 1 57.28 ? C4B NAI 302 A 1 HETATM 7 O O4B NAI . . . D 3 52.258 14.631 7.456 1 56.26 ? O4B NAI 302 A 1 HETATM 8 C C3B NAI . . . D 3 54.225 15.525 8.465 1 52.99 ? C3B NAI 302 A 1 HETATM 9 O O3B NAI . . . D 3 54.885 14.928 9.625 1 43.96 ? O3B NAI 302 A 1 HETATM 10 C C2B NAI . . . D 3 54.537 14.748 7.19 1 50.93 ? C2B NAI 302 A 1 HETATM 11 O O2B NAI . . . D 3 55.72 13.997 7.449 1 49.28 ? O2B NAI 302 A 1 HETATM 12 C C1B NAI . . . D 3 53.348 13.816 7.022 1 53.44 ? C1B NAI 302 A 1 HETATM 13 N N9A NAI . . . D 3 53.102 13.264 5.659 1 53.01 ? N9A NAI 302 A 1 HETATM 14 C C8A NAI . . . D 3 53.18 13.949 4.496 1 53.39 ? C8A NAI 302 A 1 HETATM 15 N N7A NAI . . . D 3 52.88 13.168 3.437 1 55.96 ? N7A NAI 302 A 1 HETATM 16 C C5A NAI . . . D 3 52.617 11.983 3.988 1 53.68 ? C5A NAI 302 A 1 HETATM 17 C C6A NAI . . . D 3 52.261 10.839 3.28 1 49.51 ? C6A NAI 302 A 1 HETATM 18 N N6A NAI . . . D 3 52.218 10.908 1.959 1 48.14 ? N6A NAI 302 A 1 HETATM 19 N N1A NAI . . . D 3 52.017 9.707 3.986 1 46.84 ? N1A NAI 302 A 1 HETATM 20 C C2A NAI . . . D 3 52.13 9.707 5.317 1 46.38 ? C2A NAI 302 A 1 HETATM 21 N N3A NAI . . . D 3 52.483 10.817 5.989 1 52.72 ? N3A NAI 302 A 1 HETATM 22 C C4A NAI . . . D 3 52.741 11.996 5.363 1 53.93 ? C4A NAI 302 A 1 HETATM 23 O O3 NAI . . . D 3 50.983 19.633 7.828 1 70.16 ? O3 NAI 302 A 1 HETATM 24 P PN NAI . . . D 3 49.84 20.263 8.763 1 72.2 ? PN NAI 302 A 1 HETATM 25 O O1N NAI . . . D 3 50.002 21.746 8.656 1 72.04 ? O1N NAI 302 A 1 HETATM 26 O O2N NAI . . . D 3 49.877 19.58 10.093 1 69.17 ? O2N NAI 302 A 1 HETATM 27 O O5D NAI . . . D 3 48.448 19.931 7.98 1 70.69 ? O5D NAI 302 A 1 HETATM 28 C C5D NAI . . . D 3 48.036 18.612 7.549 1 65.6 ? C5D NAI 302 A 1 HETATM 29 C C4D NAI . . . D 3 46.63 18.599 6.93 1 61.87 ? C4D NAI 302 A 1 HETATM 30 O O4D NAI . . . D 3 45.942 19.808 7.289 1 60.28 ? O4D NAI 302 A 1 HETATM 31 C C3D NAI . . . D 3 46.615 18.552 5.396 1 61.96 ? C3D NAI 302 A 1 HETATM 32 O O3D NAI . . . D 3 45.553 17.687 4.867 1 61.66 ? O3D NAI 302 A 1 HETATM 33 C C2D NAI . . . D 3 46.384 19.998 4.953 1 60.56 ? C2D NAI 302 A 1 HETATM 34 O O2D NAI . . . D 3 45.741 19.958 3.654 1 54.11 ? O2D NAI 302 A 1 HETATM 35 C C1D NAI . . . D 3 45.476 20.463 6.09 1 57.82 ? C1D NAI 302 A 1 HETATM 36 N N1N NAI . . . D 3 45.452 21.922 6.355 1 55.72 ? N1N NAI 302 A 1 HETATM 37 C C2N NAI . . . D 3 46.538 22.646 6.924 1 57.09 ? C2N NAI 302 A 1 HETATM 38 C C3N NAI . . . D 3 46.425 24.015 7.229 1 53.34 ? C3N NAI 302 A 1 HETATM 39 C C7N NAI . . . D 3 47.583 24.911 7.706 1 52.51 ? C7N NAI 302 A 1 HETATM 40 O O7N NAI . . . D 3 47.436 26.134 7.624 1 50.37 ? O7N NAI 302 A 1 HETATM 41 N N7N NAI . . . D 3 48.701 24.341 8.173 1 49.8 ? N7N NAI 302 A 1 HETATM 42 C C4N NAI . . . D 3 45.214 24.651 6.979 1 52.06 ? C4N NAI 302 A 1 HETATM 43 C C5N NAI . . . D 3 44.15 23.942 6.414 1 57.29 ? C5N NAI 302 A 1 HETATM 44 C C6N NAI . . . D 3 44.253 22.586 6.09 1 54.49 ? C6N NAI 302 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 44 #