data_1AHT # _model_server_result.job_id bMpHAtbULHQTIX-KEmOH5A _model_server_result.datetime_utc '2024-11-26 03:36:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1aht # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 1AHT # _exptl.entry_id 1AHT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 208.214 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2S)-3-(4-carbamimidoylphenyl)-2-hydroxypropanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.01 _cell.angle_gamma 90 _cell.entry_id 1AHT _cell.length_a 71.24 _cell.length_b 72.39 _cell.length_c 73.06 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AHT _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 L CYS 1 1_555 B SG CYS 119 H CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf2 B SG CYS 28 H CYS 42 1_555 B SG CYS 44 H CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf3 B SG CYS 173 H CYS 168 1_555 B SG CYS 187 H CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf4 B SG CYS 201 H CYS 191 1_555 B SG CYS 231 H CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? covale ? covale1 B OG SER 205 H SER 195 1_555 D C2 APA . H APA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.46 ? covale ? covale2 C C GLU 11 I GLU 62 1_555 C N TYS 12 I TYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale3 C C TYS 12 I TYS 63 1_555 C N LEU 13 I LEU 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? # _chem_comp.formula 'C10 H12 N2 O3' _chem_comp.formula_weight 208.214 _chem_comp.id APA _chem_comp.mon_nstd_flag . _chem_comp.name '(2S)-3-(4-carbamimidoylphenyl)-2-hydroxypropanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 APA doub 19 n n C1 OXT APA sing 20 n n C1 C2 APA sing 21 n n OXT HXT APA sing 22 n n C2 O2 APA sing 23 n n C2 C3 APA sing 24 n n C3 C1' APA sing 25 n n C3 H31 APA sing 26 n n C3 H32 APA sing 27 n n C1' C2' APA doub 28 n y C1' C6' APA sing 29 n y C2' C3' APA sing 30 n y C2' H2' APA sing 31 n n C3' C4' APA doub 32 n y C3' H3' APA sing 33 n n C4' C5' APA sing 34 n y C4' C APA sing 35 n n C5' C6' APA doub 36 n y C5' H5' APA sing 37 n n C6' H6' APA sing 38 n n C N1 APA sing 39 n n C N2 APA doub 40 n n N1 HN11 APA sing 41 n n N1 HN12 APA sing 42 n n N2 HN2 APA sing 43 n n C2 H11 APA sing 44 n n O2 H12 APA sing 45 n n # _atom_sites.entry_id 1AHT _atom_sites.fract_transf_matrix[1][1] 0.014037 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002731 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013814 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013944 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 APA H 1 401 401 APA APA . E 5 HOH L 1 625 625 HOH HOH . E 5 HOH L 2 626 626 HOH HOH . E 5 HOH L 3 636 636 HOH HOH . E 5 HOH L 4 650 650 HOH HOH . E 5 HOH L 5 666 666 HOH HOH . E 5 HOH L 6 684 684 HOH HOH . E 5 HOH L 7 686 686 HOH HOH . E 5 HOH L 8 720 720 HOH HOH . E 5 HOH L 9 722 722 HOH HOH . E 5 HOH L 10 723 723 HOH HOH . E 5 HOH L 11 727 727 HOH HOH . E 5 HOH L 12 735 735 HOH HOH . E 5 HOH L 13 739 739 HOH HOH . E 5 HOH L 14 745 745 HOH HOH . E 5 HOH L 15 758 758 HOH HOH . E 5 HOH L 16 786 786 HOH HOH . E 5 HOH L 17 806 806 HOH HOH . E 5 HOH L 18 807 807 HOH HOH . E 5 HOH L 19 808 808 HOH HOH . E 5 HOH L 20 810 810 HOH HOH . E 5 HOH L 21 829 829 HOH HOH . E 5 HOH L 22 851 851 HOH HOH . E 5 HOH L 23 853 853 HOH HOH . E 5 HOH L 24 854 854 HOH HOH . E 5 HOH L 25 855 855 HOH HOH . E 5 HOH L 26 874 874 HOH HOH . F 5 HOH H 1 601 601 HOH HOH . F 5 HOH H 2 602 602 HOH HOH . F 5 HOH H 3 603 603 HOH HOH . F 5 HOH H 4 604 604 HOH HOH . F 5 HOH H 5 605 605 HOH HOH . F 5 HOH H 6 606 606 HOH HOH . F 5 HOH H 7 607 607 HOH HOH . F 5 HOH H 8 608 608 HOH HOH . F 5 HOH H 9 609 609 HOH HOH . F 5 HOH H 10 610 610 HOH HOH . F 5 HOH H 11 611 611 HOH HOH . F 5 HOH H 12 612 612 HOH HOH . F 5 HOH H 13 613 613 HOH HOH . F 5 HOH H 14 614 614 HOH HOH . F 5 HOH H 15 615 615 HOH HOH . F 5 HOH H 16 616 616 HOH HOH . F 5 HOH H 17 617 617 HOH HOH . F 5 HOH H 18 618 618 HOH HOH . F 5 HOH H 19 619 619 HOH HOH . F 5 HOH H 20 620 620 HOH HOH . F 5 HOH H 21 621 621 HOH HOH . F 5 HOH H 22 622 622 HOH HOH . F 5 HOH H 23 623 623 HOH HOH . F 5 HOH H 24 624 624 HOH HOH . F 5 HOH H 25 627 627 HOH HOH . F 5 HOH H 26 628 628 HOH HOH . F 5 HOH H 27 629 629 HOH HOH . F 5 HOH H 28 630 630 HOH HOH . F 5 HOH H 29 631 631 HOH HOH . F 5 HOH H 30 632 632 HOH HOH . F 5 HOH H 31 633 633 HOH HOH . F 5 HOH H 32 634 634 HOH HOH . F 5 HOH H 33 635 635 HOH HOH . F 5 HOH H 34 637 637 HOH HOH . F 5 HOH H 35 638 638 HOH HOH . F 5 HOH H 36 639 639 HOH HOH . F 5 HOH H 37 640 640 HOH HOH . F 5 HOH H 38 641 641 HOH HOH . F 5 HOH H 39 643 643 HOH HOH . F 5 HOH H 40 644 644 HOH HOH . F 5 HOH H 41 645 645 HOH HOH . F 5 HOH H 42 646 646 HOH HOH . F 5 HOH H 43 647 647 HOH HOH . F 5 HOH H 44 648 648 HOH HOH . F 5 HOH H 45 649 649 HOH HOH . F 5 HOH H 46 651 651 HOH HOH . F 5 HOH H 47 652 652 HOH HOH . F 5 HOH H 48 653 653 HOH HOH . F 5 HOH H 49 654 654 HOH HOH . F 5 HOH H 50 655 655 HOH HOH . F 5 HOH H 51 657 657 HOH HOH . F 5 HOH H 52 658 658 HOH HOH . F 5 HOH H 53 659 659 HOH HOH . F 5 HOH H 54 660 660 HOH HOH . F 5 HOH H 55 661 661 HOH HOH . F 5 HOH H 56 662 662 HOH HOH . F 5 HOH H 57 663 663 HOH HOH . F 5 HOH H 58 664 664 HOH HOH . F 5 HOH H 59 665 665 HOH HOH . F 5 HOH H 60 668 668 HOH HOH . F 5 HOH H 61 670 670 HOH HOH . F 5 HOH H 62 672 672 HOH HOH . F 5 HOH H 63 674 674 HOH HOH . F 5 HOH H 64 675 675 HOH HOH . F 5 HOH H 65 676 676 HOH HOH . F 5 HOH H 66 677 677 HOH HOH . F 5 HOH H 67 678 678 HOH HOH . F 5 HOH H 68 679 679 HOH HOH . F 5 HOH H 69 680 680 HOH HOH . F 5 HOH H 70 681 681 HOH HOH . F 5 HOH H 71 682 682 HOH HOH . F 5 HOH H 72 683 683 HOH HOH . F 5 HOH H 73 685 685 HOH HOH . F 5 HOH H 74 687 687 HOH HOH . F 5 HOH H 75 689 689 HOH HOH . F 5 HOH H 76 690 690 HOH HOH . F 5 HOH H 77 691 691 HOH HOH . F 5 HOH H 78 693 693 HOH HOH . F 5 HOH H 79 697 697 HOH HOH . F 5 HOH H 80 698 698 HOH HOH . F 5 HOH H 81 701 701 HOH HOH . F 5 HOH H 82 702 702 HOH HOH . F 5 HOH H 83 703 703 HOH HOH . F 5 HOH H 84 704 704 HOH HOH . F 5 HOH H 85 705 705 HOH HOH . F 5 HOH H 86 706 706 HOH HOH . F 5 HOH H 87 707 707 HOH HOH . F 5 HOH H 88 708 708 HOH HOH . F 5 HOH H 89 709 709 HOH HOH . F 5 HOH H 90 710 710 HOH HOH . F 5 HOH H 91 711 711 HOH HOH . F 5 HOH H 92 713 713 HOH HOH . F 5 HOH H 93 714 714 HOH HOH . F 5 HOH H 94 715 715 HOH HOH . F 5 HOH H 95 716 716 HOH HOH . F 5 HOH H 96 717 717 HOH HOH . F 5 HOH H 97 718 718 HOH HOH . F 5 HOH H 98 719 719 HOH HOH . F 5 HOH H 99 721 721 HOH HOH . F 5 HOH H 100 726 726 HOH HOH . F 5 HOH H 101 728 728 HOH HOH . F 5 HOH H 102 729 729 HOH HOH . F 5 HOH H 103 732 732 HOH HOH . F 5 HOH H 104 734 734 HOH HOH . F 5 HOH H 105 738 738 HOH HOH . F 5 HOH H 106 740 740 HOH HOH . F 5 HOH H 107 744 744 HOH HOH . F 5 HOH H 108 746 746 HOH HOH . F 5 HOH H 109 749 749 HOH HOH . F 5 HOH H 110 751 751 HOH HOH . F 5 HOH H 111 753 753 HOH HOH . F 5 HOH H 112 754 754 HOH HOH . F 5 HOH H 113 756 756 HOH HOH . F 5 HOH H 114 757 757 HOH HOH . F 5 HOH H 115 759 759 HOH HOH . F 5 HOH H 116 760 760 HOH HOH . F 5 HOH H 117 761 761 HOH HOH . F 5 HOH H 118 763 763 HOH HOH . F 5 HOH H 119 765 765 HOH HOH . F 5 HOH H 120 766 766 HOH HOH . F 5 HOH H 121 767 767 HOH HOH . F 5 HOH H 122 769 769 HOH HOH . F 5 HOH H 123 770 770 HOH HOH . F 5 HOH H 124 772 772 HOH HOH . F 5 HOH H 125 774 774 HOH HOH . F 5 HOH H 126 775 775 HOH HOH . F 5 HOH H 127 776 776 HOH HOH . F 5 HOH H 128 777 777 HOH HOH . F 5 HOH H 129 778 778 HOH HOH . F 5 HOH H 130 779 779 HOH HOH . F 5 HOH H 131 780 780 HOH HOH . F 5 HOH H 132 783 783 HOH HOH . F 5 HOH H 133 784 784 HOH HOH . F 5 HOH H 134 785 785 HOH HOH . F 5 HOH H 135 788 788 HOH HOH . F 5 HOH H 136 789 789 HOH HOH . F 5 HOH H 137 790 790 HOH HOH . F 5 HOH H 138 791 791 HOH HOH . F 5 HOH H 139 792 792 HOH HOH . F 5 HOH H 140 793 793 HOH HOH . F 5 HOH H 141 794 794 HOH HOH . F 5 HOH H 142 795 795 HOH HOH . F 5 HOH H 143 796 796 HOH HOH . F 5 HOH H 144 799 799 HOH HOH . F 5 HOH H 145 800 800 HOH HOH . F 5 HOH H 146 801 801 HOH HOH . F 5 HOH H 147 802 802 HOH HOH . F 5 HOH H 148 803 803 HOH HOH . F 5 HOH H 149 804 804 HOH HOH . F 5 HOH H 150 805 805 HOH HOH . F 5 HOH H 151 811 811 HOH HOH . F 5 HOH H 152 812 812 HOH HOH . F 5 HOH H 153 813 813 HOH HOH . F 5 HOH H 154 814 814 HOH HOH . F 5 HOH H 155 815 815 HOH HOH . F 5 HOH H 156 818 818 HOH HOH . F 5 HOH H 157 819 819 HOH HOH . F 5 HOH H 158 820 820 HOH HOH . F 5 HOH H 159 821 821 HOH HOH . F 5 HOH H 160 822 822 HOH HOH . F 5 HOH H 161 823 823 HOH HOH . F 5 HOH H 162 824 824 HOH HOH . F 5 HOH H 163 826 826 HOH HOH . F 5 HOH H 164 827 827 HOH HOH . F 5 HOH H 165 828 828 HOH HOH . F 5 HOH H 166 830 830 HOH HOH . F 5 HOH H 167 833 833 HOH HOH . F 5 HOH H 168 852 852 HOH HOH . F 5 HOH H 169 856 856 HOH HOH . F 5 HOH H 170 857 857 HOH HOH . F 5 HOH H 171 858 858 HOH HOH . F 5 HOH H 172 859 859 HOH HOH . F 5 HOH H 173 860 860 HOH HOH . F 5 HOH H 174 861 861 HOH HOH . F 5 HOH H 175 862 862 HOH HOH . F 5 HOH H 176 863 863 HOH HOH . F 5 HOH H 177 864 864 HOH HOH . F 5 HOH H 178 865 865 HOH HOH . F 5 HOH H 179 867 867 HOH HOH . F 5 HOH H 180 868 868 HOH HOH . F 5 HOH H 181 869 869 HOH HOH . F 5 HOH H 182 870 870 HOH HOH . F 5 HOH H 183 871 871 HOH HOH . F 5 HOH H 184 872 872 HOH HOH . F 5 HOH H 185 873 873 HOH HOH . F 5 HOH H 186 875 875 HOH HOH . F 5 HOH H 187 876 876 HOH HOH . F 5 HOH H 188 877 877 HOH HOH . F 5 HOH H 189 878 878 HOH HOH . F 5 HOH H 190 879 879 HOH HOH . F 5 HOH H 191 880 880 HOH HOH . F 5 HOH H 192 881 881 HOH HOH . F 5 HOH H 193 882 882 HOH HOH . F 5 HOH H 194 883 883 HOH HOH . F 5 HOH H 195 884 884 HOH HOH . F 5 HOH H 196 885 885 HOH HOH . F 5 HOH H 197 886 886 HOH HOH . F 5 HOH H 198 887 887 HOH HOH . F 5 HOH H 199 901 901 HOH HOH . F 5 HOH H 200 902 902 HOH HOH . F 5 HOH H 201 903 903 HOH HOH . G 5 HOH I 1 671 671 HOH HOH . G 5 HOH I 2 712 712 HOH HOH . G 5 HOH I 3 762 762 HOH HOH . G 5 HOH I 4 866 866 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 APA . . . D 4 14.997 -10.893 17.198 1 25.12 ? C1 APA 401 H 1 HETATM 2 O O1 APA . . . D 4 16.25 -10.964 17.251 1 23.12 ? O1 APA 401 H 1 HETATM 3 O OXT APA . . . D 4 14.377 -11.177 16.158 1 29.56 ? OXT APA 401 H 1 HETATM 4 C C2 APA . . . D 4 14.067 -10.443 18.35 1 23.14 ? C2 APA 401 H 1 HETATM 5 O O2 APA . . . D 4 12.745 -10.43 18.263 1 23.53 ? O2 APA 401 H 1 HETATM 6 C C3 APA . . . D 4 14.752 -11.147 19.572 1 21.4 ? C3 APA 401 H 1 HETATM 7 C C1' APA . . . D 4 13.704 -11.472 20.653 1 17.99 ? C1' APA 401 H 1 HETATM 8 C C2' APA . . . D 4 12.897 -12.594 20.741 1 17.25 ? C2' APA 401 H 1 HETATM 9 C C3' APA . . . D 4 11.968 -12.752 21.772 1 18.83 ? C3' APA 401 H 1 HETATM 10 C C4' APA . . . D 4 11.816 -11.767 22.761 1 17.27 ? C4' APA 401 H 1 HETATM 11 C C5' APA . . . D 4 12.621 -10.64 22.681 1 16.95 ? C5' APA 401 H 1 HETATM 12 C C6' APA . . . D 4 13.535 -10.524 21.642 1 17.17 ? C6' APA 401 H 1 HETATM 13 C C APA . . . D 4 10.881 -11.768 23.971 1 19.02 ? C APA 401 H 1 HETATM 14 N N1 APA . . . D 4 10.168 -12.853 24.239 1 18.99 ? N1 APA 401 H 1 HETATM 15 N N2 APA . . . D 4 10.624 -10.632 24.631 1 19.06 ? N2 APA 401 H 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 15 #