data_1AI9 # _model_server_result.job_id YLT-1ghn5aLUFD3j-BxMug _model_server_result.datetime_utc '2024-11-27 18:05:20' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ai9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":193}' # _entry.id 1AI9 # _exptl.entry_id 1AI9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.06 _cell.angle_gamma 90 _cell.entry_id 1AI9 _cell.length_a 77.2 _cell.length_b 67.57 _cell.length_c 38.66 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AI9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 224 n n PA O2A NDP sing 225 n n PA O5B NDP sing 226 n n PA O3 NDP sing 227 n n O2A HOA2 NDP sing 228 n n O5B C5B NDP sing 229 n n C5B C4B NDP sing 230 n n C5B H51A NDP sing 231 n n C5B H52A NDP sing 232 n n C4B O4B NDP sing 233 n n C4B C3B NDP sing 234 n n C4B H4B NDP sing 235 n n O4B C1B NDP sing 236 n n C3B O3B NDP sing 237 n n C3B C2B NDP sing 238 n n C3B H3B NDP sing 239 n n O3B HO3A NDP sing 240 n n C2B O2B NDP sing 241 n n C2B C1B NDP sing 242 n n C2B H2B NDP sing 243 n n O2B P2B NDP sing 244 n n C1B N9A NDP sing 245 n n C1B H1B NDP sing 246 n n N9A C8A NDP sing 247 n y N9A C4A NDP sing 248 n y C8A N7A NDP doub 249 n y C8A H8A NDP sing 250 n n N7A C5A NDP sing 251 n y C5A C6A NDP sing 252 n y C5A C4A NDP doub 253 n y C6A N6A NDP sing 254 n n C6A N1A NDP doub 255 n y N6A H61A NDP sing 256 n n N6A H62A NDP sing 257 n n N1A C2A NDP sing 258 n y C2A N3A NDP doub 259 n y C2A H2A NDP sing 260 n n N3A C4A NDP sing 261 n y O3 PN NDP sing 262 n n PN O1N NDP doub 263 n n PN O2N NDP sing 264 n n PN O5D NDP sing 265 n n O2N H21N NDP sing 266 n n O5D C5D NDP sing 267 n n C5D C4D NDP sing 268 n n C5D H51N NDP sing 269 n n C5D H52N NDP sing 270 n n C4D O4D NDP sing 271 n n C4D C3D NDP sing 272 n n C4D H4D NDP sing 273 n n O4D C1D NDP sing 274 n n C3D O3D NDP sing 275 n n C3D C2D NDP sing 276 n n C3D H3D NDP sing 277 n n O3D HO3N NDP sing 278 n n C2D O2D NDP sing 279 n n C2D C1D NDP sing 280 n n C2D H2D NDP sing 281 n n O2D HO2N NDP sing 282 n n C1D N1N NDP sing 283 n n C1D H1D NDP sing 284 n n N1N C2N NDP sing 285 n n N1N C6N NDP sing 286 n n C2N C3N NDP doub 287 n n C2N H2N NDP sing 288 n n C3N C7N NDP sing 289 n n C3N C4N NDP sing 290 n n C7N O7N NDP doub 291 n n C7N N7N NDP sing 292 n n N7N H71N NDP sing 293 n n N7N H72N NDP sing 294 n n C4N C5N NDP sing 295 n n C4N H41N NDP sing 296 n n C4N H42N NDP sing 297 n n C5N C6N NDP doub 298 n n C5N H5N NDP sing 299 n n C6N H6N NDP sing 300 n n P2B O1X NDP doub 301 n n P2B O2X NDP sing 302 n n P2B O3X NDP sing 303 n n O2X HOP2 NDP sing 304 n n O3X HOP3 NDP sing 305 n n # _atom_sites.entry_id 1AI9 _atom_sites.fract_transf_matrix[1][1] 0.012953 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000692 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014799 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025903 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NDP A 1 193 193 NDP NDP . D 2 NDP B 1 193 193 NDP NDP . E 3 HOH A 1 204 204 HOH HOH . E 3 HOH A 2 205 205 HOH HOH . E 3 HOH A 3 206 206 HOH HOH . E 3 HOH A 4 209 209 HOH HOH . E 3 HOH A 5 210 210 HOH HOH . E 3 HOH A 6 213 213 HOH HOH . E 3 HOH A 7 214 214 HOH HOH . E 3 HOH A 8 215 215 HOH HOH . E 3 HOH A 9 222 222 HOH HOH . E 3 HOH A 10 223 223 HOH HOH . E 3 HOH A 11 225 225 HOH HOH . E 3 HOH A 12 228 228 HOH HOH . E 3 HOH A 13 229 229 HOH HOH . E 3 HOH A 14 230 230 HOH HOH . E 3 HOH A 15 232 232 HOH HOH . E 3 HOH A 16 233 233 HOH HOH . E 3 HOH A 17 235 235 HOH HOH . E 3 HOH A 18 239 239 HOH HOH . E 3 HOH A 19 240 240 HOH HOH . E 3 HOH A 20 241 241 HOH HOH . E 3 HOH A 21 244 244 HOH HOH . E 3 HOH A 22 247 247 HOH HOH . E 3 HOH A 23 248 248 HOH HOH . E 3 HOH A 24 251 251 HOH HOH . E 3 HOH A 25 257 257 HOH HOH . E 3 HOH A 26 258 258 HOH HOH . E 3 HOH A 27 259 259 HOH HOH . E 3 HOH A 28 260 260 HOH HOH . E 3 HOH A 29 262 262 HOH HOH . E 3 HOH A 30 265 265 HOH HOH . E 3 HOH A 31 269 269 HOH HOH . E 3 HOH A 32 270 270 HOH HOH . E 3 HOH A 33 272 272 HOH HOH . E 3 HOH A 34 277 277 HOH HOH . E 3 HOH A 35 280 280 HOH HOH . E 3 HOH A 36 284 284 HOH HOH . E 3 HOH A 37 285 285 HOH HOH . E 3 HOH A 38 288 288 HOH HOH . E 3 HOH A 39 289 289 HOH HOH . E 3 HOH A 40 295 295 HOH HOH . E 3 HOH A 41 298 298 HOH HOH . E 3 HOH A 42 304 304 HOH HOH . E 3 HOH A 43 305 305 HOH HOH . E 3 HOH A 44 306 306 HOH HOH . E 3 HOH A 45 307 307 HOH HOH . E 3 HOH A 46 308 308 HOH HOH . E 3 HOH A 47 309 309 HOH HOH . E 3 HOH A 48 310 310 HOH HOH . E 3 HOH A 49 315 315 HOH HOH . E 3 HOH A 50 319 319 HOH HOH . E 3 HOH A 51 321 321 HOH HOH . E 3 HOH A 52 324 324 HOH HOH . E 3 HOH A 53 326 326 HOH HOH . E 3 HOH A 54 329 329 HOH HOH . E 3 HOH A 55 332 332 HOH HOH . E 3 HOH A 56 334 334 HOH HOH . E 3 HOH A 57 335 335 HOH HOH . E 3 HOH A 58 338 338 HOH HOH . E 3 HOH A 59 340 340 HOH HOH . E 3 HOH A 60 342 342 HOH HOH . E 3 HOH A 61 345 345 HOH HOH . E 3 HOH A 62 346 346 HOH HOH . E 3 HOH A 63 347 347 HOH HOH . E 3 HOH A 64 351 351 HOH HOH . E 3 HOH A 65 352 352 HOH HOH . E 3 HOH A 66 353 353 HOH HOH . E 3 HOH A 67 357 357 HOH HOH . E 3 HOH A 68 358 358 HOH HOH . E 3 HOH A 69 359 359 HOH HOH . E 3 HOH A 70 360 360 HOH HOH . F 3 HOH B 1 201 201 HOH HOH . F 3 HOH B 2 202 202 HOH HOH . F 3 HOH B 3 203 203 HOH HOH . F 3 HOH B 4 207 207 HOH HOH . F 3 HOH B 5 208 208 HOH HOH . F 3 HOH B 6 211 211 HOH HOH . F 3 HOH B 7 212 212 HOH HOH . F 3 HOH B 8 216 216 HOH HOH . F 3 HOH B 9 217 217 HOH HOH . F 3 HOH B 10 218 218 HOH HOH . F 3 HOH B 11 219 219 HOH HOH . F 3 HOH B 12 220 220 HOH HOH . F 3 HOH B 13 221 221 HOH HOH . F 3 HOH B 14 224 224 HOH HOH . F 3 HOH B 15 226 226 HOH HOH . F 3 HOH B 16 227 227 HOH HOH . F 3 HOH B 17 231 231 HOH HOH . F 3 HOH B 18 234 234 HOH HOH . F 3 HOH B 19 236 236 HOH HOH . F 3 HOH B 20 237 237 HOH HOH . F 3 HOH B 21 238 238 HOH HOH . F 3 HOH B 22 242 242 HOH HOH . F 3 HOH B 23 243 243 HOH HOH . F 3 HOH B 24 245 245 HOH HOH . F 3 HOH B 25 246 246 HOH HOH . F 3 HOH B 26 249 249 HOH HOH . F 3 HOH B 27 250 250 HOH HOH . F 3 HOH B 28 252 252 HOH HOH . F 3 HOH B 29 253 253 HOH HOH . F 3 HOH B 30 254 254 HOH HOH . F 3 HOH B 31 255 255 HOH HOH . F 3 HOH B 32 256 256 HOH HOH . F 3 HOH B 33 261 261 HOH HOH . F 3 HOH B 34 263 263 HOH HOH . F 3 HOH B 35 264 264 HOH HOH . F 3 HOH B 36 266 266 HOH HOH . F 3 HOH B 37 267 267 HOH HOH . F 3 HOH B 38 268 268 HOH HOH . F 3 HOH B 39 271 271 HOH HOH . F 3 HOH B 40 273 273 HOH HOH . F 3 HOH B 41 274 274 HOH HOH . F 3 HOH B 42 275 275 HOH HOH . F 3 HOH B 43 276 276 HOH HOH . F 3 HOH B 44 278 278 HOH HOH . F 3 HOH B 45 279 279 HOH HOH . F 3 HOH B 46 281 281 HOH HOH . F 3 HOH B 47 282 282 HOH HOH . F 3 HOH B 48 283 283 HOH HOH . F 3 HOH B 49 286 286 HOH HOH . F 3 HOH B 50 287 287 HOH HOH . F 3 HOH B 51 290 290 HOH HOH . F 3 HOH B 52 291 291 HOH HOH . F 3 HOH B 53 292 292 HOH HOH . F 3 HOH B 54 293 293 HOH HOH . F 3 HOH B 55 294 294 HOH HOH . F 3 HOH B 56 296 296 HOH HOH . F 3 HOH B 57 297 297 HOH HOH . F 3 HOH B 58 299 299 HOH HOH . F 3 HOH B 59 300 300 HOH HOH . F 3 HOH B 60 301 301 HOH HOH . F 3 HOH B 61 302 302 HOH HOH . F 3 HOH B 62 303 303 HOH HOH . F 3 HOH B 63 311 311 HOH HOH . F 3 HOH B 64 312 312 HOH HOH . F 3 HOH B 65 313 313 HOH HOH . F 3 HOH B 66 314 314 HOH HOH . F 3 HOH B 67 316 316 HOH HOH . F 3 HOH B 68 317 317 HOH HOH . F 3 HOH B 69 318 318 HOH HOH . F 3 HOH B 70 320 320 HOH HOH . F 3 HOH B 71 322 322 HOH HOH . F 3 HOH B 72 323 323 HOH HOH . F 3 HOH B 73 325 325 HOH HOH . F 3 HOH B 74 327 327 HOH HOH . F 3 HOH B 75 328 328 HOH HOH . F 3 HOH B 76 330 330 HOH HOH . F 3 HOH B 77 331 331 HOH HOH . F 3 HOH B 78 333 333 HOH HOH . F 3 HOH B 79 336 336 HOH HOH . F 3 HOH B 80 337 337 HOH HOH . F 3 HOH B 81 339 339 HOH HOH . F 3 HOH B 82 341 341 HOH HOH . F 3 HOH B 83 343 343 HOH HOH . F 3 HOH B 84 344 344 HOH HOH . F 3 HOH B 85 348 348 HOH HOH . F 3 HOH B 86 349 349 HOH HOH . F 3 HOH B 87 350 350 HOH HOH . F 3 HOH B 88 354 354 HOH HOH . F 3 HOH B 89 355 355 HOH HOH . F 3 HOH B 90 356 356 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . C 2 28.854 -7.475 12.645 1 17.02 ? PA NDP 193 A 1 HETATM 2 O O1A NDP . . . C 2 29.841 -6.847 11.786 1 16.19 ? O1A NDP 193 A 1 HETATM 3 O O2A NDP . . . C 2 27.612 -6.667 12.795 1 17.07 ? O2A NDP 193 A 1 HETATM 4 O O5B NDP . . . C 2 29.41 -7.691 14.124 1 18.27 ? O5B NDP 193 A 1 HETATM 5 C C5B NDP . . . C 2 28.634 -7.869 15.328 1 19.55 ? C5B NDP 193 A 1 HETATM 6 C C4B NDP . . . C 2 29.649 -7.589 16.464 1 20.35 ? C4B NDP 193 A 1 HETATM 7 O O4B NDP . . . C 2 29.806 -6.159 16.57 1 20.92 ? O4B NDP 193 A 1 HETATM 8 C C3B NDP . . . C 2 29.137 -8.065 17.856 1 21.48 ? C3B NDP 193 A 1 HETATM 9 O O3B NDP . . . C 2 29.326 -9.487 17.951 1 22.57 ? O3B NDP 193 A 1 HETATM 10 C C2B NDP . . . C 2 29.939 -7.109 18.766 1 22.07 ? C2B NDP 193 A 1 HETATM 11 O O2B NDP . . . C 2 31.306 -7.382 19.084 1 22.32 ? O2B NDP 193 A 1 HETATM 12 C C1B NDP . . . C 2 29.924 -5.853 17.942 1 21.71 ? C1B NDP 193 A 1 HETATM 13 N N9A NDP . . . C 2 28.765 -5.098 18.273 1 22.23 ? N9A NDP 193 A 1 HETATM 14 C C8A NDP . . . C 2 27.485 -5.412 17.867 1 23.17 ? C8A NDP 193 A 1 HETATM 15 N N7A NDP . . . C 2 26.602 -4.523 18.276 1 23.73 ? N7A NDP 193 A 1 HETATM 16 C C5A NDP . . . C 2 27.38 -3.605 18.945 1 24.08 ? C5A NDP 193 A 1 HETATM 17 C C6A NDP . . . C 2 27.017 -2.409 19.622 1 24.62 ? C6A NDP 193 A 1 HETATM 18 N N6A NDP . . . C 2 25.729 -2.086 19.636 1 25.19 ? N6A NDP 193 A 1 HETATM 19 N N1A NDP . . . C 2 27.989 -1.688 20.188 1 24.28 ? N1A NDP 193 A 1 HETATM 20 C C2A NDP . . . C 2 29.287 -2.179 20.124 1 24.29 ? C2A NDP 193 A 1 HETATM 21 N N3A NDP . . . C 2 29.704 -3.261 19.545 1 24.07 ? N3A NDP 193 A 1 HETATM 22 C C4A NDP . . . C 2 28.709 -3.959 18.977 1 23.29 ? C4A NDP 193 A 1 HETATM 23 O O3 NDP . . . C 2 28.485 -8.919 12.256 1 17.43 ? O3 NDP 193 A 1 HETATM 24 P PN NDP . . . C 2 27.255 -9.825 11.803 1 17.96 ? PN NDP 193 A 1 HETATM 25 O O1N NDP . . . C 2 27.64 -11.271 11.902 1 18.74 ? O1N NDP 193 A 1 HETATM 26 O O2N NDP . . . C 2 26.049 -9.548 12.639 1 17.69 ? O2N NDP 193 A 1 HETATM 27 O O5D NDP . . . C 2 26.958 -9.39 10.306 1 18.01 ? O5D NDP 193 A 1 HETATM 28 C C5D NDP . . . C 2 27.708 -10.066 9.263 1 19.56 ? C5D NDP 193 A 1 HETATM 29 C C4D NDP . . . C 2 26.751 -10.282 8.074 1 19.83 ? C4D NDP 193 A 1 HETATM 30 O O4D NDP . . . C 2 26.523 -8.956 7.491 1 19.74 ? O4D NDP 193 A 1 HETATM 31 C C3D NDP . . . C 2 27.392 -11.16 7.028 1 20.22 ? C3D NDP 193 A 1 HETATM 32 O O3D NDP . . . C 2 26.656 -12.149 6.337 1 20.46 ? O3D NDP 193 A 1 HETATM 33 C C2D NDP . . . C 2 27.879 -10.069 6.034 1 20.39 ? C2D NDP 193 A 1 HETATM 34 O O2D NDP . . . C 2 28.005 -10.713 4.761 1 20.74 ? O2D NDP 193 A 1 HETATM 35 C C1D NDP . . . C 2 26.771 -9.041 6.118 1 20.57 ? C1D NDP 193 A 1 HETATM 36 N N1N NDP . . . C 2 27.125 -7.689 5.578 1 20.83 ? N1N NDP 193 A 1 HETATM 37 C C2N NDP . . . C 2 26.419 -7.284 4.456 1 21.09 ? C2N NDP 193 A 1 HETATM 38 C C3N NDP . . . C 2 26.679 -6.071 3.877 1 21.11 ? C3N NDP 193 A 1 HETATM 39 C C7N NDP . . . C 2 25.834 -5.689 2.587 1 20.86 ? C7N NDP 193 A 1 HETATM 40 O O7N NDP . . . C 2 25.94 -4.6 2.07 1 20.3 ? O7N NDP 193 A 1 HETATM 41 N N7N NDP . . . C 2 25.012 -6.66 2.104 1 20.08 ? N7N NDP 193 A 1 HETATM 42 C C4N NDP . . . C 2 27.646 -5.185 4.401 1 21.21 ? C4N NDP 193 A 1 HETATM 43 C C5N NDP . . . C 2 28.26 -5.66 5.59 1 21.52 ? C5N NDP 193 A 1 HETATM 44 C C6N NDP . . . C 2 28.072 -6.876 6.204 1 21.47 ? C6N NDP 193 A 1 HETATM 45 P P2B NDP . . . C 2 31.592 -8.136 20.514 1 24.06 ? P2B NDP 193 A 1 HETATM 46 O O1X NDP . . . C 2 33.15 -8.197 20.448 1 24.17 ? O1X NDP 193 A 1 HETATM 47 O O2X NDP . . . C 2 30.994 -7.334 21.529 1 23.9 ? O2X NDP 193 A 1 HETATM 48 O O3X NDP . . . C 2 31.015 -9.484 20.327 1 24.72 ? O3X NDP 193 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 48 #