data_1AIQ # _model_server_result.job_id 1zb3CRkNgdqi-3U3hY6vSg _model_server_result.datetime_utc '2025-03-05 02:24:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1aiq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":266}' # _entry.id 1AIQ # _exptl.entry_id 1AIQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 477.469 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '10-PROPARGYL-5,8-DIDEAZAFOLIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1AIQ _cell.length_a 126.61 _cell.length_b 126.61 _cell.length_c 67.3 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AIQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C CXM 1 A CXM 1 1_555 A N LYS 2 A LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale2 A SG CYS 146 A CYS 146 1_555 C C6 UMP . A UMP 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? covale ? covale3 B C CXM 1 B CXM 1 1_555 B N LYS 2 B LYS 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? # _chem_comp.formula 'C24 H23 N5 O6' _chem_comp.formula_weight 477.469 _chem_comp.id CB3 _chem_comp.mon_nstd_flag . _chem_comp.name '10-PROPARGYL-5,8-DIDEAZAFOLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 CB3 sing 70 n y N1 C8A CB3 sing 71 n y N1 HN1 CB3 sing 72 n n C2 NA2 CB3 sing 73 n n C2 N3 CB3 doub 74 n y NA2 HN21 CB3 sing 75 n n NA2 HN22 CB3 sing 76 n n N3 C4 CB3 sing 77 n y C4 O4 CB3 doub 78 n n C4 C4A CB3 sing 79 n y C4A C5 CB3 doub 80 n y C4A C8A CB3 sing 81 n y C5 C6 CB3 sing 82 n y C5 H5 CB3 sing 83 n n C6 C7 CB3 doub 84 n y C6 C9 CB3 sing 85 n n C7 C8 CB3 sing 86 n y C7 H7 CB3 sing 87 n n C8 C8A CB3 doub 88 n y C8 H8 CB3 sing 89 n n C9 N10 CB3 sing 90 n n C9 H91 CB3 sing 91 n n C9 H92 CB3 sing 92 n n N10 C14 CB3 sing 93 n n N10 CP1 CB3 sing 94 n n C11 C12 CB3 doub 95 n y C11 C16 CB3 sing 96 n y C11 C CB3 sing 97 n n C12 C13 CB3 sing 98 n y C12 H12 CB3 sing 99 n n C13 C14 CB3 doub 100 n y C13 H13 CB3 sing 101 n n C14 C15 CB3 sing 102 n y C15 C16 CB3 doub 103 n y C15 H15 CB3 sing 104 n n C16 H16 CB3 sing 105 n n C O CB3 doub 106 n n C N CB3 sing 107 n n N CA CB3 sing 108 n n N HN CB3 sing 109 n n CA CB CB3 sing 110 n n CA CT CB3 sing 111 n n CA HA CB3 sing 112 n n CB CG CB3 sing 113 n n CB HB1 CB3 sing 114 n n CB HB2 CB3 sing 115 n n CG CD CB3 sing 116 n n CG HG1 CB3 sing 117 n n CG HG2 CB3 sing 118 n n CD OE1 CB3 doub 119 n n CD OE2 CB3 sing 120 n n OE2 HOE2 CB3 sing 121 n n CT O1 CB3 doub 122 n n CT O2 CB3 sing 123 n n O2 HO2 CB3 sing 124 n n CP1 CP2 CB3 sing 125 n n CP1 HP11 CB3 sing 126 n n CP1 HP12 CB3 sing 127 n n CP2 CP3 CB3 trip 128 n n CP3 HP3 CB3 sing 129 n n # _atom_sites.entry_id 1AIQ _atom_sites.fract_transf_matrix[1][1] 0.007898 _atom_sites.fract_transf_matrix[1][2] 0.00456 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00912 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014859 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 UMP A 1 265 265 UMP UMP . D 3 CB3 A 1 266 266 CB3 CB3 . E 2 UMP B 1 266 266 UMP UMP . F 3 CB3 B 1 267 267 CB3 CB3 . G 4 HOH A 1 270 270 HOH HOH . G 4 HOH A 2 271 271 HOH HOH . G 4 HOH A 3 272 272 HOH HOH . G 4 HOH A 4 273 273 HOH HOH . G 4 HOH A 5 274 274 HOH HOH . G 4 HOH A 6 275 275 HOH HOH . G 4 HOH A 7 277 277 HOH HOH . G 4 HOH A 8 278 278 HOH HOH . G 4 HOH A 9 282 282 HOH HOH . G 4 HOH A 10 283 283 HOH HOH . G 4 HOH A 11 284 284 HOH HOH . G 4 HOH A 12 285 285 HOH HOH . G 4 HOH A 13 286 286 HOH HOH . G 4 HOH A 14 287 287 HOH HOH . G 4 HOH A 15 289 289 HOH HOH . G 4 HOH A 16 290 290 HOH HOH . G 4 HOH A 17 291 291 HOH HOH . G 4 HOH A 18 292 292 HOH HOH . G 4 HOH A 19 293 293 HOH HOH . G 4 HOH A 20 294 294 HOH HOH . G 4 HOH A 21 297 297 HOH HOH . G 4 HOH A 22 299 299 HOH HOH . G 4 HOH A 23 300 300 HOH HOH . G 4 HOH A 24 302 302 HOH HOH . G 4 HOH A 25 305 305 HOH HOH . G 4 HOH A 26 306 306 HOH HOH . G 4 HOH A 27 307 307 HOH HOH . G 4 HOH A 28 308 308 HOH HOH . G 4 HOH A 29 309 309 HOH HOH . G 4 HOH A 30 311 311 HOH HOH . G 4 HOH A 31 313 313 HOH HOH . G 4 HOH A 32 314 314 HOH HOH . G 4 HOH A 33 315 315 HOH HOH . G 4 HOH A 34 316 316 HOH HOH . G 4 HOH A 35 317 317 HOH HOH . G 4 HOH A 36 318 318 HOH HOH . G 4 HOH A 37 319 319 HOH HOH . G 4 HOH A 38 320 320 HOH HOH . G 4 HOH A 39 321 321 HOH HOH . G 4 HOH A 40 322 322 HOH HOH . G 4 HOH A 41 324 324 HOH HOH . G 4 HOH A 42 325 325 HOH HOH . G 4 HOH A 43 326 326 HOH HOH . G 4 HOH A 44 327 327 HOH HOH . G 4 HOH A 45 328 328 HOH HOH . G 4 HOH A 46 329 329 HOH HOH . G 4 HOH A 47 330 330 HOH HOH . G 4 HOH A 48 332 332 HOH HOH . G 4 HOH A 49 333 333 HOH HOH . G 4 HOH A 50 334 334 HOH HOH . G 4 HOH A 51 335 335 HOH HOH . G 4 HOH A 52 336 336 HOH HOH . G 4 HOH A 53 337 337 HOH HOH . G 4 HOH A 54 338 338 HOH HOH . G 4 HOH A 55 343 343 HOH HOH . G 4 HOH A 56 344 344 HOH HOH . G 4 HOH A 57 347 347 HOH HOH . G 4 HOH A 58 354 354 HOH HOH . G 4 HOH A 59 358 358 HOH HOH . G 4 HOH A 60 359 359 HOH HOH . G 4 HOH A 61 363 363 HOH HOH . G 4 HOH A 62 366 366 HOH HOH . G 4 HOH A 63 373 373 HOH HOH . G 4 HOH A 64 374 374 HOH HOH . G 4 HOH A 65 375 375 HOH HOH . G 4 HOH A 66 376 376 HOH HOH . G 4 HOH A 67 379 379 HOH HOH . G 4 HOH A 68 383 383 HOH HOH . G 4 HOH A 69 384 384 HOH HOH . G 4 HOH A 70 385 385 HOH HOH . G 4 HOH A 71 386 386 HOH HOH . G 4 HOH A 72 387 387 HOH HOH . G 4 HOH A 73 388 388 HOH HOH . G 4 HOH A 74 389 389 HOH HOH . G 4 HOH A 75 390 390 HOH HOH . G 4 HOH A 76 391 391 HOH HOH . G 4 HOH A 77 392 392 HOH HOH . G 4 HOH A 78 393 393 HOH HOH . G 4 HOH A 79 394 394 HOH HOH . G 4 HOH A 80 395 395 HOH HOH . G 4 HOH A 81 396 396 HOH HOH . G 4 HOH A 82 398 398 HOH HOH . G 4 HOH A 83 403 403 HOH HOH . G 4 HOH A 84 405 405 HOH HOH . G 4 HOH A 85 406 406 HOH HOH . G 4 HOH A 86 407 407 HOH HOH . G 4 HOH A 87 408 408 HOH HOH . G 4 HOH A 88 409 409 HOH HOH . G 4 HOH A 89 411 411 HOH HOH . G 4 HOH A 90 412 412 HOH HOH . G 4 HOH A 91 413 413 HOH HOH . G 4 HOH A 92 415 415 HOH HOH . G 4 HOH A 93 417 417 HOH HOH . G 4 HOH A 94 418 418 HOH HOH . G 4 HOH A 95 419 419 HOH HOH . G 4 HOH A 96 420 420 HOH HOH . G 4 HOH A 97 421 421 HOH HOH . G 4 HOH A 98 425 425 HOH HOH . G 4 HOH A 99 426 426 HOH HOH . G 4 HOH A 100 427 427 HOH HOH . G 4 HOH A 101 430 430 HOH HOH . G 4 HOH A 102 431 431 HOH HOH . G 4 HOH A 103 432 432 HOH HOH . G 4 HOH A 104 433 433 HOH HOH . G 4 HOH A 105 434 434 HOH HOH . G 4 HOH A 106 436 436 HOH HOH . G 4 HOH A 107 437 437 HOH HOH . G 4 HOH A 108 438 438 HOH HOH . G 4 HOH A 109 439 439 HOH HOH . G 4 HOH A 110 440 440 HOH HOH . G 4 HOH A 111 441 441 HOH HOH . G 4 HOH A 112 442 442 HOH HOH . G 4 HOH A 113 443 443 HOH HOH . H 4 HOH B 1 268 268 HOH HOH . H 4 HOH B 2 269 269 HOH HOH . H 4 HOH B 3 276 276 HOH HOH . H 4 HOH B 4 279 279 HOH HOH . H 4 HOH B 5 280 280 HOH HOH . H 4 HOH B 6 281 281 HOH HOH . H 4 HOH B 7 288 288 HOH HOH . H 4 HOH B 8 295 295 HOH HOH . H 4 HOH B 9 296 296 HOH HOH . H 4 HOH B 10 298 298 HOH HOH . H 4 HOH B 11 301 301 HOH HOH . H 4 HOH B 12 303 303 HOH HOH . H 4 HOH B 13 304 304 HOH HOH . H 4 HOH B 14 310 310 HOH HOH . H 4 HOH B 15 312 312 HOH HOH . H 4 HOH B 16 323 323 HOH HOH . H 4 HOH B 17 331 331 HOH HOH . H 4 HOH B 18 339 339 HOH HOH . H 4 HOH B 19 340 340 HOH HOH . H 4 HOH B 20 341 341 HOH HOH . H 4 HOH B 21 342 342 HOH HOH . H 4 HOH B 22 345 345 HOH HOH . H 4 HOH B 23 346 346 HOH HOH . H 4 HOH B 24 348 348 HOH HOH . H 4 HOH B 25 349 349 HOH HOH . H 4 HOH B 26 350 350 HOH HOH . H 4 HOH B 27 351 351 HOH HOH . H 4 HOH B 28 352 352 HOH HOH . H 4 HOH B 29 353 353 HOH HOH . H 4 HOH B 30 355 355 HOH HOH . H 4 HOH B 31 356 356 HOH HOH . H 4 HOH B 32 357 357 HOH HOH . H 4 HOH B 33 360 360 HOH HOH . H 4 HOH B 34 361 361 HOH HOH . H 4 HOH B 35 362 362 HOH HOH . H 4 HOH B 36 364 364 HOH HOH . H 4 HOH B 37 365 365 HOH HOH . H 4 HOH B 38 367 367 HOH HOH . H 4 HOH B 39 368 368 HOH HOH . H 4 HOH B 40 369 369 HOH HOH . H 4 HOH B 41 370 370 HOH HOH . H 4 HOH B 42 371 371 HOH HOH . H 4 HOH B 43 372 372 HOH HOH . H 4 HOH B 44 377 377 HOH HOH . H 4 HOH B 45 378 378 HOH HOH . H 4 HOH B 46 380 380 HOH HOH . H 4 HOH B 47 381 381 HOH HOH . H 4 HOH B 48 382 382 HOH HOH . H 4 HOH B 49 397 397 HOH HOH . H 4 HOH B 50 399 399 HOH HOH . H 4 HOH B 51 400 400 HOH HOH . H 4 HOH B 52 401 401 HOH HOH . H 4 HOH B 53 402 402 HOH HOH . H 4 HOH B 54 404 404 HOH HOH . H 4 HOH B 55 410 410 HOH HOH . H 4 HOH B 56 414 414 HOH HOH . H 4 HOH B 57 416 416 HOH HOH . H 4 HOH B 58 422 422 HOH HOH . H 4 HOH B 59 423 423 HOH HOH . H 4 HOH B 60 424 424 HOH HOH . H 4 HOH B 61 428 428 HOH HOH . H 4 HOH B 62 429 429 HOH HOH . H 4 HOH B 63 435 435 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 CB3 . . . D 3 12.985 18.192 30.717 1 30.56 ? N1 CB3 266 A 1 HETATM 2 C C2 CB3 . . . D 3 12.821 19.025 31.66 1 44.38 ? C2 CB3 266 A 1 HETATM 3 N NA2 CB3 . . . D 3 11.812 20.045 31.544 1 22.96 ? NA2 CB3 266 A 1 HETATM 4 N N3 CB3 . . . D 3 13.552 19.004 32.801 1 28.3 ? N3 CB3 266 A 1 HETATM 5 C C4 CB3 . . . D 3 14.492 18.071 32.963 1 30.64 ? C4 CB3 266 A 1 HETATM 6 O O4 CB3 . . . D 3 15.132 18.092 34.025 1 25.89 ? O4 CB3 266 A 1 HETATM 7 C C4A CB3 . . . D 3 14.681 17.158 31.982 1 37.37 ? C4A CB3 266 A 1 HETATM 8 C C5 CB3 . . . D 3 15.625 16.182 32.124 1 31.56 ? C5 CB3 266 A 1 HETATM 9 C C6 CB3 . . . D 3 15.736 15.275 31.075 1 34.45 ? C6 CB3 266 A 1 HETATM 10 C C7 CB3 . . . D 3 14.967 15.357 29.933 1 33.43 ? C7 CB3 266 A 1 HETATM 11 C C8 CB3 . . . D 3 14.085 16.338 29.841 1 35.94 ? C8 CB3 266 A 1 HETATM 12 C C8A CB3 . . . D 3 13.927 17.237 30.855 1 41.82 ? C8A CB3 266 A 1 HETATM 13 C C9 CB3 . . . D 3 16.67 14.146 31.041 1 27.18 ? C9 CB3 266 A 1 HETATM 14 N N10 CB3 . . . D 3 16.856 13.486 32.39 1 35.38 ? N10 CB3 266 A 1 HETATM 15 C C11 CB3 . . . D 3 14.01 13.089 35.464 1 34.82 ? C11 CB3 266 A 1 HETATM 16 C C12 CB3 . . . D 3 15.329 13.257 35.82 1 21.13 ? C12 CB3 266 A 1 HETATM 17 C C13 CB3 . . . D 3 16.296 13.389 34.767 1 33.93 ? C13 CB3 266 A 1 HETATM 18 C C14 CB3 . . . D 3 15.861 13.358 33.451 1 44.76 ? C14 CB3 266 A 1 HETATM 19 C C15 CB3 . . . D 3 14.553 13.184 33.159 1 33.12 ? C15 CB3 266 A 1 HETATM 20 C C16 CB3 . . . D 3 13.566 13.047 34.186 1 22.65 ? C16 CB3 266 A 1 HETATM 21 C C CB3 . . . D 3 12.886 12.911 36.47 1 50.72 ? C CB3 266 A 1 HETATM 22 O O CB3 . . . D 3 11.741 12.572 36.172 1 35.19 ? O CB3 266 A 1 HETATM 23 N N CB3 . . . D 3 13.361 12.593 37.69 1 50.05 ? N CB3 266 A 1 HETATM 24 C CA CB3 . . . D 3 12.337 12.276 38.654 1 62.25 ? CA CB3 266 A 1 HETATM 25 C CB CB3 . . . D 3 11.941 10.767 38.545 1 35.21 ? CB CB3 266 A 1 HETATM 26 C CG CB3 . . . D 3 13.203 10.01 38.975 1 100 ? CG CB3 266 A 1 HETATM 27 C CD CB3 . . . D 3 13.068 8.568 38.377 1 100 ? CD CB3 266 A 1 HETATM 28 O OE1 CB3 . . . D 3 14.116 7.809 38.517 1 53 ? OE1 CB3 266 A 1 HETATM 29 O OE2 CB3 . . . D 3 12.136 8.156 37.639 1 88.31 ? OE2 CB3 266 A 1 HETATM 30 C CT CB3 . . . D 3 12.807 12.57 40.079 1 100 ? CT CB3 266 A 1 HETATM 31 O O1 CB3 . . . D 3 13.972 13.004 40.185 1 34.39 ? O1 CB3 266 A 1 HETATM 32 O O2 CB3 . . . D 3 11.956 12.77 40.941 1 37.37 ? O2 CB3 266 A 1 HETATM 33 C CP1 CB3 . . . D 3 18.239 13.482 32.945 1 23.93 ? CP1 CB3 266 A 1 HETATM 34 C CP2 CB3 . . . D 3 18.682 14.748 33.594 1 34.9 ? CP2 CB3 266 A 1 HETATM 35 C CP3 CB3 . . . D 3 19.039 15.771 34.136 1 24.22 ? CP3 CB3 266 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 35 #