data_1AJ2 # _model_server_result.job_id D3hXQ_OAugAf5aZ6JfFheg _model_server_result.datetime_utc '2025-08-02 09:28:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1aj2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":283}' # _entry.id 1AJ2 # _exptl.entry_id 1AJ2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 355.138 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[7,8-DIHYDRO-PTERIN-6-YL METHANYL]-PHOSPHONOPHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.8 _cell.angle_gamma 90 _cell.entry_id 1AJ2 _cell.length_a 93.5 _cell.length_b 60.94 _cell.length_c 59.93 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AJ2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H11 N5 O8 P2' _chem_comp.formula_weight 355.138 _chem_comp.id 2PH _chem_comp.mon_nstd_flag . _chem_comp.name '[7,8-DIHYDRO-PTERIN-6-YL METHANYL]-PHOSPHONOPHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 2PH doub 1 n n N1 C9 2PH sing 2 n n C2 C3 2PH sing 3 n n C2 C11 2PH sing 4 n n C3 N4 2PH sing 5 n n C3 H31 2PH sing 6 n n C3 H32 2PH sing 7 n n N4 C10 2PH sing 8 n n N4 HN4 2PH sing 9 n n N5 C6 2PH doub 10 n y N5 C10 2PH sing 11 n y C6 N6 2PH sing 12 n n C6 N7 2PH sing 13 n y N6 HN61 2PH sing 14 n n N6 HN62 2PH sing 15 n n N7 C8 2PH sing 16 n y N7 HN7 2PH sing 17 n n C8 O8 2PH doub 18 n n C8 C9 2PH sing 19 n y C9 C10 2PH doub 20 n y C11 O4 2PH sing 21 n n C11 H111 2PH sing 22 n n C11 H112 2PH sing 23 n n O4 P1 2PH sing 24 n n P1 O1P 2PH doub 25 n n P1 O2P 2PH sing 26 n n P1 O3P 2PH sing 27 n n O2P HOP2 2PH sing 28 n n O3P P2 2PH sing 29 n n P2 O4P 2PH doub 30 n n P2 O5P 2PH sing 31 n n P2 O6P 2PH sing 32 n n O5P HOP5 2PH sing 33 n n O6P HOP6 2PH sing 34 n n # _atom_sites.entry_id 1AJ2 _atom_sites.fract_transf_matrix[1][1] 0.010695 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004942 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01641 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018381 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 284 284 SO4 SO4 . C 3 2PH A 1 283 283 2PH 2PH . D 4 HOH A 1 285 285 HOH HOH . D 4 HOH A 2 286 286 HOH HOH . D 4 HOH A 3 287 287 HOH HOH . D 4 HOH A 4 288 288 HOH HOH . D 4 HOH A 5 289 289 HOH HOH . D 4 HOH A 6 290 290 HOH HOH . D 4 HOH A 7 291 291 HOH HOH . D 4 HOH A 8 292 292 HOH HOH . D 4 HOH A 9 293 293 HOH HOH . D 4 HOH A 10 294 294 HOH HOH . D 4 HOH A 11 295 295 HOH HOH . D 4 HOH A 12 296 296 HOH HOH . D 4 HOH A 13 297 297 HOH HOH . D 4 HOH A 14 298 298 HOH HOH . D 4 HOH A 15 299 299 HOH HOH . D 4 HOH A 16 300 300 HOH HOH . D 4 HOH A 17 301 301 HOH HOH . D 4 HOH A 18 302 302 HOH HOH . D 4 HOH A 19 303 303 HOH HOH . D 4 HOH A 20 304 304 HOH HOH . D 4 HOH A 21 305 305 HOH HOH . D 4 HOH A 22 306 306 HOH HOH . D 4 HOH A 23 307 307 HOH HOH . D 4 HOH A 24 308 308 HOH HOH . D 4 HOH A 25 309 309 HOH HOH . D 4 HOH A 26 310 310 HOH HOH . D 4 HOH A 27 311 311 HOH HOH . D 4 HOH A 28 312 312 HOH HOH . D 4 HOH A 29 313 313 HOH HOH . D 4 HOH A 30 314 314 HOH HOH . D 4 HOH A 31 315 315 HOH HOH . D 4 HOH A 32 316 316 HOH HOH . D 4 HOH A 33 317 317 HOH HOH . D 4 HOH A 34 318 318 HOH HOH . D 4 HOH A 35 319 319 HOH HOH . D 4 HOH A 36 320 320 HOH HOH . D 4 HOH A 37 321 321 HOH HOH . D 4 HOH A 38 322 322 HOH HOH . D 4 HOH A 39 323 323 HOH HOH . D 4 HOH A 40 324 324 HOH HOH . D 4 HOH A 41 325 325 HOH HOH . D 4 HOH A 42 326 326 HOH HOH . D 4 HOH A 43 327 327 HOH HOH . D 4 HOH A 44 328 328 HOH HOH . D 4 HOH A 45 329 329 HOH HOH . D 4 HOH A 46 330 330 HOH HOH . D 4 HOH A 47 331 331 HOH HOH . D 4 HOH A 48 332 332 HOH HOH . D 4 HOH A 49 333 333 HOH HOH . D 4 HOH A 50 334 334 HOH HOH . D 4 HOH A 51 335 335 HOH HOH . D 4 HOH A 52 336 336 HOH HOH . D 4 HOH A 53 337 337 HOH HOH . D 4 HOH A 54 338 338 HOH HOH . D 4 HOH A 55 339 339 HOH HOH . D 4 HOH A 56 340 340 HOH HOH . D 4 HOH A 57 341 341 HOH HOH . D 4 HOH A 58 342 342 HOH HOH . D 4 HOH A 59 343 343 HOH HOH . D 4 HOH A 60 344 344 HOH HOH . D 4 HOH A 61 345 345 HOH HOH . D 4 HOH A 62 346 346 HOH HOH . D 4 HOH A 63 347 347 HOH HOH . D 4 HOH A 64 348 348 HOH HOH . D 4 HOH A 65 349 349 HOH HOH . D 4 HOH A 66 350 350 HOH HOH . D 4 HOH A 67 351 351 HOH HOH . D 4 HOH A 68 352 352 HOH HOH . D 4 HOH A 69 353 353 HOH HOH . D 4 HOH A 70 354 354 HOH HOH . D 4 HOH A 71 355 355 HOH HOH . D 4 HOH A 72 356 356 HOH HOH . D 4 HOH A 73 357 357 HOH HOH . D 4 HOH A 74 358 358 HOH HOH . D 4 HOH A 75 359 359 HOH HOH . D 4 HOH A 76 360 360 HOH HOH . D 4 HOH A 77 361 361 HOH HOH . D 4 HOH A 78 362 362 HOH HOH . D 4 HOH A 79 363 363 HOH HOH . D 4 HOH A 80 364 364 HOH HOH . D 4 HOH A 81 365 365 HOH HOH . D 4 HOH A 82 366 366 HOH HOH . D 4 HOH A 83 367 367 HOH HOH . D 4 HOH A 84 368 368 HOH HOH . D 4 HOH A 85 369 369 HOH HOH . D 4 HOH A 86 370 370 HOH HOH . D 4 HOH A 87 371 371 HOH HOH . D 4 HOH A 88 372 372 HOH HOH . D 4 HOH A 89 373 373 HOH HOH . D 4 HOH A 90 374 374 HOH HOH . D 4 HOH A 91 375 375 HOH HOH . D 4 HOH A 92 376 376 HOH HOH . D 4 HOH A 93 377 377 HOH HOH . D 4 HOH A 94 378 378 HOH HOH . D 4 HOH A 95 379 379 HOH HOH . D 4 HOH A 96 380 380 HOH HOH . D 4 HOH A 97 381 381 HOH HOH . D 4 HOH A 98 382 382 HOH HOH . D 4 HOH A 99 383 383 HOH HOH . D 4 HOH A 100 384 384 HOH HOH . D 4 HOH A 101 385 385 HOH HOH . D 4 HOH A 102 386 386 HOH HOH . D 4 HOH A 103 387 387 HOH HOH . D 4 HOH A 104 388 388 HOH HOH . D 4 HOH A 105 389 389 HOH HOH . D 4 HOH A 106 390 390 HOH HOH . D 4 HOH A 107 391 391 HOH HOH . D 4 HOH A 108 392 392 HOH HOH . D 4 HOH A 109 393 393 HOH HOH . D 4 HOH A 110 394 394 HOH HOH . D 4 HOH A 111 395 395 HOH HOH . D 4 HOH A 112 396 396 HOH HOH . D 4 HOH A 113 397 397 HOH HOH . D 4 HOH A 114 398 398 HOH HOH . D 4 HOH A 115 399 399 HOH HOH . D 4 HOH A 116 400 400 HOH HOH . D 4 HOH A 117 401 401 HOH HOH . D 4 HOH A 118 402 402 HOH HOH . D 4 HOH A 119 403 403 HOH HOH . D 4 HOH A 120 404 404 HOH HOH . D 4 HOH A 121 405 405 HOH HOH . D 4 HOH A 122 406 406 HOH HOH . D 4 HOH A 123 407 407 HOH HOH . D 4 HOH A 124 408 408 HOH HOH . D 4 HOH A 125 409 409 HOH HOH . D 4 HOH A 126 410 410 HOH HOH . D 4 HOH A 127 411 411 HOH HOH . D 4 HOH A 128 412 412 HOH HOH . D 4 HOH A 129 413 413 HOH HOH . D 4 HOH A 130 414 414 HOH HOH . D 4 HOH A 131 415 415 HOH HOH . D 4 HOH A 132 416 416 HOH HOH . D 4 HOH A 133 417 417 HOH HOH . D 4 HOH A 134 418 418 HOH HOH . D 4 HOH A 135 419 419 HOH HOH . D 4 HOH A 136 420 420 HOH HOH . D 4 HOH A 137 421 421 HOH HOH . D 4 HOH A 138 422 422 HOH HOH . D 4 HOH A 139 423 423 HOH HOH . D 4 HOH A 140 424 424 HOH HOH . D 4 HOH A 141 425 425 HOH HOH . D 4 HOH A 142 426 426 HOH HOH . D 4 HOH A 143 427 427 HOH HOH . D 4 HOH A 144 428 428 HOH HOH . D 4 HOH A 145 429 429 HOH HOH . D 4 HOH A 146 430 430 HOH HOH . D 4 HOH A 147 431 431 HOH HOH . D 4 HOH A 148 432 432 HOH HOH . D 4 HOH A 149 433 433 HOH HOH . D 4 HOH A 150 434 434 HOH HOH . D 4 HOH A 151 435 435 HOH HOH . D 4 HOH A 152 436 436 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 2PH . . . C 3 41.348 3.414 6.774 1 18.83 ? N1 2PH 283 A 1 HETATM 2 C C2 2PH . . . C 3 42.005 4.532 6.941 1 20.13 ? C2 2PH 283 A 1 HETATM 3 C C3 2PH . . . C 3 42.632 4.963 8.201 1 18.84 ? C3 2PH 283 A 1 HETATM 4 N N4 2PH . . . C 3 42.341 4.047 9.27 1 20.09 ? N4 2PH 283 A 1 HETATM 5 N N5 2PH . . . C 3 41.356 1.975 10.177 1 17.7 ? N5 2PH 283 A 1 HETATM 6 C C6 2PH . . . C 3 40.776 0.807 9.905 1 20.06 ? C6 2PH 283 A 1 HETATM 7 N N6 2PH . . . C 3 40.537 -0.098 10.901 1 16.18 ? N6 2PH 283 A 1 HETATM 8 N N7 2PH . . . C 3 40.356 0.462 8.606 1 19.58 ? N7 2PH 283 A 1 HETATM 9 C C8 2PH . . . C 3 40.579 1.3 7.525 1 19.19 ? C8 2PH 283 A 1 HETATM 10 O O8 2PH . . . C 3 40.344 0.933 6.366 1 22.63 ? O8 2PH 283 A 1 HETATM 11 C C9 2PH . . . C 3 41.147 2.525 7.808 1 19.03 ? C9 2PH 283 A 1 HETATM 12 C C10 2PH . . . C 3 41.591 2.845 9.152 1 19.37 ? C10 2PH 283 A 1 HETATM 13 C C11 2PH . . . C 3 42.124 5.453 5.812 1 21.38 ? C11 2PH 283 A 1 HETATM 14 O O4 2PH . . . C 3 43.043 6.483 6.205 1 26.73 ? O4 2PH 283 A 1 HETATM 15 P P1 2PH . . . C 3 43.17 7.86 5.435 1 27.57 ? P1 2PH 283 A 1 HETATM 16 O O1P 2PH . . . C 3 44.359 8.569 6.027 1 26.64 ? O1P 2PH 283 A 1 HETATM 17 O O2P 2PH . . . C 3 43.087 7.532 3.988 1 26.26 ? O2P 2PH 283 A 1 HETATM 18 O O3P 2PH . . . C 3 41.87 8.603 5.889 1 24.15 ? O3P 2PH 283 A 1 HETATM 19 P P2 2PH . . . C 3 40.524 8.824 6.576 1 20.42 ? P2 2PH 283 A 1 HETATM 20 O O4P 2PH . . . C 3 39.951 10.14 6.265 1 26.17 ? O4P 2PH 283 A 1 HETATM 21 O O5P 2PH . . . C 3 40.76 8.879 8.094 1 20.44 ? O5P 2PH 283 A 1 HETATM 22 O O6P 2PH . . . C 3 39.551 7.733 6.327 1 25.81 ? O6P 2PH 283 A 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 22 #