data_1AJX # _model_server_result.job_id rxAgcq2zQM1q-mbBq_n6rQ _model_server_result.datetime_utc '2024-10-12 10:21:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ajx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":500}' # _entry.id 1AJX # _exptl.entry_id 1AJX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 538.633 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description AHA001 _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1AJX _cell.length_a 59 _cell.length_b 86.8 _cell.length_c 46.8 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AJX _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C33 H34 N2 O5' _chem_comp.formula_weight 538.633 _chem_comp.id AH1 _chem_comp.mon_nstd_flag . _chem_comp.name AHA001 _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(4R,5S, 6S, 7R)-1,3-DIBENZYL-4,7-BIS(PHENOXYMETHYL)-5,6-DIHYDROXY-1,3 DIAZEPAN-2-ONE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N01 C02 AH1 sing 1 n n N01 C07 AH1 sing 2 n n N01 C08 AH1 sing 3 n n C02 N03 AH1 sing 4 n n C02 O15 AH1 doub 5 n n N03 C04 AH1 sing 6 n n N03 C16 AH1 sing 7 n n C04 C05 AH1 sing 8 n n C04 C23 AH1 sing 9 n n C04 H04 AH1 sing 10 n n C05 C06 AH1 sing 11 n n C05 O31 AH1 sing 12 n n C05 H05 AH1 sing 13 n n C06 C07 AH1 sing 14 n n C06 O32 AH1 sing 15 n n C06 H06 AH1 sing 16 n n C07 C33 AH1 sing 17 n n C07 H07 AH1 sing 18 n n C08 C09 AH1 sing 19 n n C08 H081 AH1 sing 20 n n C08 H082 AH1 sing 21 n n C09 C10 AH1 doub 22 n y C09 C14 AH1 sing 23 n y C10 C11 AH1 sing 24 n y C10 H10 AH1 sing 25 n n C11 C12 AH1 doub 26 n y C11 H11 AH1 sing 27 n n C12 C13 AH1 sing 28 n y C12 H12 AH1 sing 29 n n C13 C14 AH1 doub 30 n y C13 H13 AH1 sing 31 n n C14 H14 AH1 sing 32 n n C16 C17 AH1 sing 33 n n C16 H161 AH1 sing 34 n n C16 H162 AH1 sing 35 n n C17 C18 AH1 doub 36 n y C17 C22 AH1 sing 37 n y C18 C19 AH1 sing 38 n y C18 H18 AH1 sing 39 n n C19 C20 AH1 doub 40 n y C19 H19 AH1 sing 41 n n C20 C21 AH1 sing 42 n y C20 H20 AH1 sing 43 n n C21 C22 AH1 doub 44 n y C21 H21 AH1 sing 45 n n C22 H22 AH1 sing 46 n n C23 O24 AH1 sing 47 n n C23 H231 AH1 sing 48 n n C23 H232 AH1 sing 49 n n O24 C25 AH1 sing 50 n n C25 C26 AH1 doub 51 n y C25 C30 AH1 sing 52 n y C26 C27 AH1 sing 53 n y C26 H26 AH1 sing 54 n n C27 C28 AH1 doub 55 n y C27 H27 AH1 sing 56 n n C28 C29 AH1 sing 57 n y C28 H28 AH1 sing 58 n n C29 C30 AH1 doub 59 n y C29 H29 AH1 sing 60 n n C30 H30 AH1 sing 61 n n O31 HO1 AH1 sing 62 n n O32 HO2 AH1 sing 63 n n C33 O34 AH1 sing 64 n n C33 H331 AH1 sing 65 n n C33 H332 AH1 sing 66 n n O34 C35 AH1 sing 67 n n C35 C36 AH1 doub 68 n y C35 C40 AH1 sing 69 n y C36 C37 AH1 sing 70 n y C36 H36 AH1 sing 71 n n C37 C38 AH1 doub 72 n y C37 H37 AH1 sing 73 n n C38 C39 AH1 sing 74 n y C38 H38 AH1 sing 75 n n C39 C40 AH1 doub 76 n y C39 H39 AH1 sing 77 n n C40 H40 AH1 sing 78 n n # _atom_sites.entry_id 1AJX _atom_sites.fract_transf_matrix[1][1] 0.016949 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011521 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021368 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AH1 A 1 500 500 AH1 AH1 . D 3 HOH A 1 306 306 HOH HOH . D 3 HOH A 2 311 311 HOH HOH . D 3 HOH A 3 313 313 HOH HOH . D 3 HOH A 4 314 314 HOH HOH . D 3 HOH A 5 317 317 HOH HOH . D 3 HOH A 6 318 318 HOH HOH . D 3 HOH A 7 319 319 HOH HOH . D 3 HOH A 8 320 320 HOH HOH . D 3 HOH A 9 321 321 HOH HOH . D 3 HOH A 10 326 326 HOH HOH . D 3 HOH A 11 327 327 HOH HOH . D 3 HOH A 12 330 330 HOH HOH . D 3 HOH A 13 331 331 HOH HOH . D 3 HOH A 14 332 332 HOH HOH . D 3 HOH A 15 333 333 HOH HOH . D 3 HOH A 16 334 334 HOH HOH . D 3 HOH A 17 335 335 HOH HOH . D 3 HOH A 18 338 338 HOH HOH . D 3 HOH A 19 339 339 HOH HOH . D 3 HOH A 20 343 343 HOH HOH . D 3 HOH A 21 345 345 HOH HOH . D 3 HOH A 22 349 349 HOH HOH . D 3 HOH A 23 350 350 HOH HOH . D 3 HOH A 24 352 352 HOH HOH . D 3 HOH A 25 353 353 HOH HOH . D 3 HOH A 26 354 354 HOH HOH . D 3 HOH A 27 355 355 HOH HOH . D 3 HOH A 28 358 358 HOH HOH . D 3 HOH A 29 359 359 HOH HOH . D 3 HOH A 30 364 364 HOH HOH . D 3 HOH A 31 368 368 HOH HOH . D 3 HOH A 32 374 374 HOH HOH . D 3 HOH A 33 375 375 HOH HOH . D 3 HOH A 34 378 378 HOH HOH . D 3 HOH A 35 379 379 HOH HOH . D 3 HOH A 36 382 382 HOH HOH . D 3 HOH A 37 385 385 HOH HOH . D 3 HOH A 38 386 386 HOH HOH . D 3 HOH A 39 387 387 HOH HOH . D 3 HOH A 40 388 388 HOH HOH . D 3 HOH A 41 390 390 HOH HOH . D 3 HOH A 42 391 391 HOH HOH . D 3 HOH A 43 394 394 HOH HOH . D 3 HOH A 44 398 398 HOH HOH . D 3 HOH A 45 403 403 HOH HOH . D 3 HOH A 46 409 409 HOH HOH . D 3 HOH A 47 410 410 HOH HOH . D 3 HOH A 48 413 413 HOH HOH . D 3 HOH A 49 414 414 HOH HOH . E 3 HOH B 1 301 301 HOH HOH . E 3 HOH B 2 302 302 HOH HOH . E 3 HOH B 3 303 303 HOH HOH . E 3 HOH B 4 304 304 HOH HOH . E 3 HOH B 5 305 305 HOH HOH . E 3 HOH B 6 307 307 HOH HOH . E 3 HOH B 7 308 308 HOH HOH . E 3 HOH B 8 309 309 HOH HOH . E 3 HOH B 9 310 310 HOH HOH . E 3 HOH B 10 312 312 HOH HOH . E 3 HOH B 11 315 315 HOH HOH . E 3 HOH B 12 316 316 HOH HOH . E 3 HOH B 13 322 322 HOH HOH . E 3 HOH B 14 323 323 HOH HOH . E 3 HOH B 15 324 324 HOH HOH . E 3 HOH B 16 325 325 HOH HOH . E 3 HOH B 17 328 328 HOH HOH . E 3 HOH B 18 329 329 HOH HOH . E 3 HOH B 19 336 336 HOH HOH . E 3 HOH B 20 337 337 HOH HOH . E 3 HOH B 21 340 340 HOH HOH . E 3 HOH B 22 341 341 HOH HOH . E 3 HOH B 23 342 342 HOH HOH . E 3 HOH B 24 344 344 HOH HOH . E 3 HOH B 25 346 346 HOH HOH . E 3 HOH B 26 347 347 HOH HOH . E 3 HOH B 27 348 348 HOH HOH . E 3 HOH B 28 351 351 HOH HOH . E 3 HOH B 29 356 356 HOH HOH . E 3 HOH B 30 360 360 HOH HOH . E 3 HOH B 31 361 361 HOH HOH . E 3 HOH B 32 362 362 HOH HOH . E 3 HOH B 33 363 363 HOH HOH . E 3 HOH B 34 366 366 HOH HOH . E 3 HOH B 35 367 367 HOH HOH . E 3 HOH B 36 369 369 HOH HOH . E 3 HOH B 37 370 370 HOH HOH . E 3 HOH B 38 371 371 HOH HOH . E 3 HOH B 39 372 372 HOH HOH . E 3 HOH B 40 373 373 HOH HOH . E 3 HOH B 41 376 376 HOH HOH . E 3 HOH B 42 377 377 HOH HOH . E 3 HOH B 43 380 380 HOH HOH . E 3 HOH B 44 381 381 HOH HOH . E 3 HOH B 45 383 383 HOH HOH . E 3 HOH B 46 384 384 HOH HOH . E 3 HOH B 47 389 389 HOH HOH . E 3 HOH B 48 392 392 HOH HOH . E 3 HOH B 49 393 393 HOH HOH . E 3 HOH B 50 395 395 HOH HOH . E 3 HOH B 51 396 396 HOH HOH . E 3 HOH B 52 397 397 HOH HOH . E 3 HOH B 53 399 399 HOH HOH . E 3 HOH B 54 400 400 HOH HOH . E 3 HOH B 55 401 401 HOH HOH . E 3 HOH B 56 402 402 HOH HOH . E 3 HOH B 57 404 404 HOH HOH . E 3 HOH B 58 405 405 HOH HOH . E 3 HOH B 59 407 407 HOH HOH . E 3 HOH B 60 408 408 HOH HOH . E 3 HOH B 61 411 411 HOH HOH . E 3 HOH B 62 412 412 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N01 AH1 . . . C 2 11.741 23.343 5.989 1 19.81 ? N01 AH1 500 A 1 HETATM 2 C C02 AH1 . . . C 2 12.265 22.028 6.051 1 20.51 ? C02 AH1 500 A 1 HETATM 3 N N03 AH1 . . . C 2 13.507 21.739 5.638 1 19.11 ? N03 AH1 500 A 1 HETATM 4 C C04 AH1 . . . C 2 14.652 22.663 5.76 1 20.96 ? C04 AH1 500 A 1 HETATM 5 C C05 AH1 . . . C 2 14.574 23.829 4.674 1 18.24 ? C05 AH1 500 A 1 HETATM 6 C C06 AH1 . . . C 2 13.431 24.851 4.942 1 18.09 ? C06 AH1 500 A 1 HETATM 7 C C07 AH1 . . . C 2 11.994 24.268 4.839 1 19.29 ? C07 AH1 500 A 1 HETATM 8 C C08 AH1 . . . C 2 10.453 23.612 6.669 1 19.69 ? C08 AH1 500 A 1 HETATM 9 C C09 AH1 . . . C 2 10.285 24.954 7.281 1 19.77 ? C09 AH1 500 A 1 HETATM 10 C C10 AH1 . . . C 2 9.18 25.737 6.968 1 19.95 ? C10 AH1 500 A 1 HETATM 11 C C11 AH1 . . . C 2 9.039 27.011 7.522 1 22.27 ? C11 AH1 500 A 1 HETATM 12 C C12 AH1 . . . C 2 10.011 27.526 8.396 1 18.67 ? C12 AH1 500 A 1 HETATM 13 C C13 AH1 . . . C 2 11.1 26.732 8.696 1 19.27 ? C13 AH1 500 A 1 HETATM 14 C C14 AH1 . . . C 2 11.227 25.436 8.13 1 17.22 ? C14 AH1 500 A 1 HETATM 15 O O15 AH1 . . . C 2 11.549 21.091 6.503 1 17.64 ? O15 AH1 500 A 1 HETATM 16 C C16 AH1 . . . C 2 13.925 20.389 5.492 1 18.94 ? C16 AH1 500 A 1 HETATM 17 C C17 AH1 . . . C 2 14.841 19.956 4.36 1 21.2 ? C17 AH1 500 A 1 HETATM 18 C C18 AH1 . . . C 2 16.112 19.365 4.62 1 19.23 ? C18 AH1 500 A 1 HETATM 19 C C19 AH1 . . . C 2 16.89 18.931 3.539 1 22.81 ? C19 AH1 500 A 1 HETATM 20 C C20 AH1 . . . C 2 16.459 19.059 2.217 1 19.48 ? C20 AH1 500 A 1 HETATM 21 C C21 AH1 . . . C 2 15.222 19.65 1.938 1 21.62 ? C21 AH1 500 A 1 HETATM 22 C C22 AH1 . . . C 2 14.399 20.099 3 1 19.56 ? C22 AH1 500 A 1 HETATM 23 C C23 AH1 . . . C 2 14.603 23.293 7.116 1 19.82 ? C23 AH1 500 A 1 HETATM 24 O O24 AH1 . . . C 2 14.744 22.495 8.337 1 22.97 ? O24 AH1 500 A 1 HETATM 25 C C25 AH1 . . . C 2 15.782 21.774 8.66 1 22.46 ? C25 AH1 500 A 1 HETATM 26 C C26 AH1 . . . C 2 15.625 20.603 9.466 1 26.14 ? C26 AH1 500 A 1 HETATM 27 C C27 AH1 . . . C 2 16.778 19.855 9.822 1 25.9 ? C27 AH1 500 A 1 HETATM 28 C C28 AH1 . . . C 2 18.069 20.27 9.368 1 25.42 ? C28 AH1 500 A 1 HETATM 29 C C29 AH1 . . . C 2 18.226 21.418 8.555 1 25.26 ? C29 AH1 500 A 1 HETATM 30 C C30 AH1 . . . C 2 17.084 22.167 8.209 1 24.88 ? C30 AH1 500 A 1 HETATM 31 O O31 AH1 . . . C 2 15.746 24.539 4.742 1 14.56 ? O31 AH1 500 A 1 HETATM 32 O O32 AH1 . . . C 2 13.55 25.84 3.984 1 21.72 ? O32 AH1 500 A 1 HETATM 33 C C33 AH1 . . . C 2 11.832 23.452 3.515 1 19.18 ? C33 AH1 500 A 1 HETATM 34 O O34 AH1 . . . C 2 10.461 23.135 3.063 1 22.93 ? O34 AH1 500 A 1 HETATM 35 C C35 AH1 . . . C 2 9.524 24.083 2.747 1 22.24 ? C35 AH1 500 A 1 HETATM 36 C C36 AH1 . . . C 2 9.909 25.327 2.231 1 23.26 ? C36 AH1 500 A 1 HETATM 37 C C37 AH1 . . . C 2 8.945 26.31 1.88 1 26.71 ? C37 AH1 500 A 1 HETATM 38 C C38 AH1 . . . C 2 7.565 26.06 2.052 1 26.63 ? C38 AH1 500 A 1 HETATM 39 C C39 AH1 . . . C 2 7.175 24.809 2.588 1 26.74 ? C39 AH1 500 A 1 HETATM 40 C C40 AH1 . . . C 2 8.171 23.826 2.927 1 23.99 ? C40 AH1 500 A 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 40 #