data_1AK0 # _model_server_result.job_id Isdzzg3TqgwbQ_RLCqV1Hw _model_server_result.datetime_utc '2024-11-23 08:38:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ak0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":271}' # _entry.id 1AK0 # _exptl.entry_id 1AK0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1AK0 _cell.length_a 41.98 _cell.length_b 74.04 _cell.length_c 102.13 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AK0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B NAG 1 B 1 NAG ? 281 NAG 2 n B NAG 2 B 2 NAG ? 282 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 72 A CYS 72 1_555 A SG CYS 217 A CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 A SG CYS 80 A CYS 80 1_555 A SG CYS 85 A CYS 85 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? covale ? covale1 A ND2 ASN 92 A ASN 92 1_555 B C1 NAG . B NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.464 ? covale ? covale2 A ND2 ASN 138 A ASN 138 1_555 D C1 NAG . A NAG 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? covale ? covale3 A ND2 ASN 197 A ASN 197 1_555 C C1 NAG . A NAG 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.471 ? covale ? covale4 I O3' ADS . A ADS 292 1_555 J P THS . A THS 293 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.638 ? covale ? covale5 J O3' THS . A THS 293 1_555 K P THS . A THS 294 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.669 ? covale ? covale6 K O3' THS . A THS 294 1_555 L P THS . A THS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.642 ? covale ? covale7 B O4 NAG . B NAG 1 1_555 B C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.387 ? metalc ? metalc1 A O TRP 1 A TRP 1 1_555 G ZN ZN . A ZN 273 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc2 A N TRP 1 A TRP 1 1_555 G ZN ZN . A ZN 273 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.529 ? metalc ? metalc3 A NE2 HIS 6 A HIS 6 1_555 G ZN ZN . A ZN 273 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? metalc ? metalc4 A NE2 HIS 15 A HIS 15 1_555 H ZN ZN . A ZN 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc5 A OD1 ASP 45 A ASP 45 1_555 E ZN ZN . A ZN 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.77 ? metalc ? metalc6 A ND1 HIS 60 A HIS 60 1_555 E ZN ZN . A ZN 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc7 A NE2 HIS 116 A HIS 116 1_555 E ZN ZN . A ZN 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc8 A OD2 ASP 120 A ASP 120 1_555 E ZN ZN . A ZN 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc9 A OD1 ASP 120 A ASP 120 1_555 G ZN ZN . A ZN 273 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? metalc ? metalc10 A NE2 HIS 126 A HIS 126 1_555 F ZN ZN . A ZN 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc11 A NE2 HIS 149 A HIS 149 1_555 F ZN ZN . A ZN 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc12 A OD2 ASP 153 A ASP 153 1_555 F ZN ZN . A ZN 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? metalc ? metalc13 A OD1 ASP 153 A ASP 153 1_555 F ZN ZN . A ZN 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.775 ? metalc ? metalc14 A CD GLU 181 A GLU 181 1_555 H ZN ZN . A ZN 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc15 A OE2 GLU 181 A GLU 181 1_555 H ZN ZN . A ZN 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.805 ? metalc ? metalc16 A OE1 GLU 181 A GLU 181 1_555 H ZN ZN . A ZN 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? metalc ? metalc17 A ND1 HIS 223 A HIS 223 3_655 H ZN ZN . A ZN 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc18 F ZN ZN . A ZN 272 1_555 L O3' THS . A THS 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc19 H ZN ZN . A ZN 274 1_555 M O HOH . A HOH 539 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1AK0 _atom_sites.fract_transf_matrix[1][1] 0.023821 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013506 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009791 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG A 1 285 285 NAG NAG . D 3 NAG A 1 287 287 NAG NAG . E 4 ZN A 1 271 271 ZN ZN . F 4 ZN A 1 272 272 ZN ZN . G 4 ZN A 1 273 273 ZN ZN . H 4 ZN A 1 274 274 ZN ZN . I 5 ADS A 1 292 292 ADS ADS . J 6 THS A 1 293 293 THS THS . K 6 THS A 1 294 294 THS THS . L 6 THS A 1 295 295 THS THS . M 7 HOH A 1 400 400 HOH HOH . M 7 HOH A 2 401 401 HOH HOH . M 7 HOH A 3 402 402 HOH HOH . M 7 HOH A 4 403 403 HOH HOH . M 7 HOH A 5 404 404 HOH HOH . M 7 HOH A 6 405 405 HOH HOH . M 7 HOH A 7 406 406 HOH HOH . M 7 HOH A 8 407 407 HOH HOH . M 7 HOH A 9 408 408 HOH HOH . M 7 HOH A 10 409 409 HOH HOH . M 7 HOH A 11 410 410 HOH HOH . M 7 HOH A 12 411 411 HOH HOH . M 7 HOH A 13 412 412 HOH HOH . M 7 HOH A 14 413 413 HOH HOH . M 7 HOH A 15 414 414 HOH HOH . M 7 HOH A 16 415 415 HOH HOH . M 7 HOH A 17 416 416 HOH HOH . M 7 HOH A 18 417 417 HOH HOH . M 7 HOH A 19 418 418 HOH HOH . M 7 HOH A 20 419 419 HOH HOH . M 7 HOH A 21 420 420 HOH HOH . M 7 HOH A 22 421 421 HOH HOH . M 7 HOH A 23 422 422 HOH HOH . M 7 HOH A 24 423 423 HOH HOH . M 7 HOH A 25 424 424 HOH HOH . M 7 HOH A 26 425 425 HOH HOH . M 7 HOH A 27 426 426 HOH HOH . M 7 HOH A 28 427 427 HOH HOH . M 7 HOH A 29 428 428 HOH HOH . M 7 HOH A 30 429 429 HOH HOH . M 7 HOH A 31 430 430 HOH HOH . M 7 HOH A 32 431 431 HOH HOH . M 7 HOH A 33 432 432 HOH HOH . M 7 HOH A 34 433 433 HOH HOH . M 7 HOH A 35 434 434 HOH HOH . M 7 HOH A 36 435 435 HOH HOH . M 7 HOH A 37 436 436 HOH HOH . M 7 HOH A 38 437 437 HOH HOH . M 7 HOH A 39 438 438 HOH HOH . M 7 HOH A 40 439 439 HOH HOH . M 7 HOH A 41 440 440 HOH HOH . M 7 HOH A 42 441 441 HOH HOH . M 7 HOH A 43 442 442 HOH HOH . M 7 HOH A 44 443 443 HOH HOH . M 7 HOH A 45 444 444 HOH HOH . M 7 HOH A 46 445 445 HOH HOH . M 7 HOH A 47 446 446 HOH HOH . M 7 HOH A 48 447 447 HOH HOH . M 7 HOH A 49 448 448 HOH HOH . M 7 HOH A 50 449 449 HOH HOH . M 7 HOH A 51 450 450 HOH HOH . M 7 HOH A 52 451 451 HOH HOH . M 7 HOH A 53 452 452 HOH HOH . M 7 HOH A 54 453 453 HOH HOH . M 7 HOH A 55 454 454 HOH HOH . M 7 HOH A 56 455 455 HOH HOH . M 7 HOH A 57 456 456 HOH HOH . M 7 HOH A 58 457 457 HOH HOH . M 7 HOH A 59 458 458 HOH HOH . M 7 HOH A 60 459 459 HOH HOH . M 7 HOH A 61 460 460 HOH HOH . M 7 HOH A 62 461 461 HOH HOH . M 7 HOH A 63 462 462 HOH HOH . M 7 HOH A 64 463 463 HOH HOH . M 7 HOH A 65 464 464 HOH HOH . M 7 HOH A 66 465 465 HOH HOH . M 7 HOH A 67 466 466 HOH HOH . M 7 HOH A 68 467 467 HOH HOH . M 7 HOH A 69 468 468 HOH HOH . M 7 HOH A 70 469 469 HOH HOH . M 7 HOH A 71 470 470 HOH HOH . M 7 HOH A 72 471 471 HOH HOH . M 7 HOH A 73 472 472 HOH HOH . M 7 HOH A 74 473 473 HOH HOH . M 7 HOH A 75 474 474 HOH HOH . M 7 HOH A 76 475 475 HOH HOH . M 7 HOH A 77 476 476 HOH HOH . M 7 HOH A 78 477 477 HOH HOH . M 7 HOH A 79 478 478 HOH HOH . M 7 HOH A 80 479 479 HOH HOH . M 7 HOH A 81 480 480 HOH HOH . M 7 HOH A 82 481 481 HOH HOH . M 7 HOH A 83 482 482 HOH HOH . M 7 HOH A 84 483 483 HOH HOH . M 7 HOH A 85 484 484 HOH HOH . M 7 HOH A 86 485 485 HOH HOH . M 7 HOH A 87 486 486 HOH HOH . M 7 HOH A 88 487 487 HOH HOH . M 7 HOH A 89 488 488 HOH HOH . M 7 HOH A 90 489 489 HOH HOH . M 7 HOH A 91 490 490 HOH HOH . M 7 HOH A 92 491 491 HOH HOH . M 7 HOH A 93 492 492 HOH HOH . M 7 HOH A 94 493 493 HOH HOH . M 7 HOH A 95 494 494 HOH HOH . M 7 HOH A 96 495 495 HOH HOH . M 7 HOH A 97 496 496 HOH HOH . M 7 HOH A 98 497 497 HOH HOH . M 7 HOH A 99 498 498 HOH HOH . M 7 HOH A 100 499 499 HOH HOH . M 7 HOH A 101 500 500 HOH HOH . M 7 HOH A 102 501 501 HOH HOH . M 7 HOH A 103 502 502 HOH HOH . M 7 HOH A 104 503 503 HOH HOH . M 7 HOH A 105 504 504 HOH HOH . M 7 HOH A 106 505 505 HOH HOH . M 7 HOH A 107 506 506 HOH HOH . M 7 HOH A 108 507 507 HOH HOH . M 7 HOH A 109 508 508 HOH HOH . M 7 HOH A 110 509 509 HOH HOH . M 7 HOH A 111 510 510 HOH HOH . M 7 HOH A 112 511 511 HOH HOH . M 7 HOH A 113 512 512 HOH HOH . M 7 HOH A 114 513 513 HOH HOH . M 7 HOH A 115 514 514 HOH HOH . M 7 HOH A 116 515 515 HOH HOH . M 7 HOH A 117 516 516 HOH HOH . M 7 HOH A 118 517 517 HOH HOH . M 7 HOH A 119 518 518 HOH HOH . M 7 HOH A 120 519 519 HOH HOH . M 7 HOH A 121 520 520 HOH HOH . M 7 HOH A 122 521 521 HOH HOH . M 7 HOH A 123 522 522 HOH HOH . M 7 HOH A 124 523 523 HOH HOH . M 7 HOH A 125 524 524 HOH HOH . M 7 HOH A 126 525 525 HOH HOH . M 7 HOH A 127 526 526 HOH HOH . M 7 HOH A 128 527 527 HOH HOH . M 7 HOH A 129 528 528 HOH HOH . M 7 HOH A 130 529 529 HOH HOH . M 7 HOH A 131 530 530 HOH HOH . M 7 HOH A 132 531 531 HOH HOH . M 7 HOH A 133 532 532 HOH HOH . M 7 HOH A 134 533 533 HOH HOH . M 7 HOH A 135 534 534 HOH HOH . M 7 HOH A 136 535 535 HOH HOH . M 7 HOH A 137 536 536 HOH HOH . M 7 HOH A 138 537 537 HOH HOH . M 7 HOH A 139 538 538 HOH HOH . M 7 HOH A 140 539 539 HOH HOH . M 7 HOH A 141 540 540 HOH HOH . M 7 HOH A 142 541 541 HOH HOH . M 7 HOH A 143 542 542 HOH HOH . M 7 HOH A 144 543 543 HOH HOH . M 7 HOH A 145 544 544 HOH HOH . M 7 HOH A 146 545 545 HOH HOH . M 7 HOH A 147 546 546 HOH HOH . M 7 HOH A 148 547 547 HOH HOH . M 7 HOH A 149 548 548 HOH HOH . M 7 HOH A 150 549 549 HOH HOH . M 7 HOH A 151 550 550 HOH HOH . M 7 HOH A 152 551 551 HOH HOH . M 7 HOH A 153 552 552 HOH HOH . M 7 HOH A 154 553 553 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x 16.468 _atom_site.Cartn_y 28.301 _atom_site.Cartn_z 6.361 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 13.59 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 271 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 76 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #