data_1AKS # _model_server_result.job_id XPGe2m2q-02oIZAEUbgLWw _model_server_result.datetime_utc '2024-11-15 16:54:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1aks # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":146}' # _entry.id 1AKS # _exptl.entry_id 1AKS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1AKS _cell.length_a 77.7 _cell.length_b 53.82 _cell.length_c 47.08 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AKS _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 B SG CYS 12 B CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf2 A SG CYS 25 A CYS 42 1_555 A SG CYS 41 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf3 A SG CYS 109 A CYS 128 1_555 B SG CYS 85 B CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf4 A SG CYS 116 A CYS 136 1_555 B SG CYS 58 B CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf5 B SG CYS 23 B CYS 168 1_555 B SG CYS 37 B CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf6 B SG CYS 48 B CYS 191 1_555 B SG CYS 72 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc1 A OE1 GLU 52 A GLU 70 1_555 C CA CA . A CA 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc2 A O ASN 54 A ASN 72 1_555 C CA CA . A CA 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc3 A O VAL 57 A VAL 75 1_555 C CA CA . A CA 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc4 A OE2 GLU 59 A GLU 77 1_555 C CA CA . A CA 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.885 ? metalc ? metalc5 A OE2 GLU 62 A GLU 80 1_555 C CA CA . A CA 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc6 C CA CA . A CA 146 1_555 D O HOH . A HOH 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.582 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1AKS _atom_sites.fract_transf_matrix[1][1] 0.01287 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01858 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02124 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 146 112 CA CA . D 4 HOH A 1 147 1 HOH HOH . D 4 HOH A 2 148 2 HOH HOH . D 4 HOH A 3 149 3 HOH HOH . D 4 HOH A 4 150 4 HOH HOH . D 4 HOH A 5 151 5 HOH HOH . D 4 HOH A 6 152 6 HOH HOH . D 4 HOH A 7 153 7 HOH HOH . D 4 HOH A 8 154 8 HOH HOH . D 4 HOH A 9 155 9 HOH HOH . D 4 HOH A 10 156 10 HOH HOH . D 4 HOH A 11 157 11 HOH HOH . D 4 HOH A 12 158 12 HOH HOH . D 4 HOH A 13 159 13 HOH HOH . D 4 HOH A 14 160 14 HOH HOH . D 4 HOH A 15 161 15 HOH HOH . D 4 HOH A 16 162 16 HOH HOH . D 4 HOH A 17 163 17 HOH HOH . D 4 HOH A 18 164 18 HOH HOH . D 4 HOH A 19 165 20 HOH HOH . D 4 HOH A 20 166 21 HOH HOH . D 4 HOH A 21 167 22 HOH HOH . D 4 HOH A 22 168 23 HOH HOH . D 4 HOH A 23 169 24 HOH HOH . D 4 HOH A 24 170 34 HOH HOH . D 4 HOH A 25 171 35 HOH HOH . D 4 HOH A 26 172 36 HOH HOH . D 4 HOH A 27 173 38 HOH HOH . D 4 HOH A 28 174 39 HOH HOH . D 4 HOH A 29 175 44 HOH HOH . D 4 HOH A 30 176 46 HOH HOH . D 4 HOH A 31 177 47 HOH HOH . D 4 HOH A 32 178 48 HOH HOH . D 4 HOH A 33 179 50 HOH HOH . D 4 HOH A 34 180 51 HOH HOH . D 4 HOH A 35 181 52 HOH HOH . D 4 HOH A 36 182 53 HOH HOH . D 4 HOH A 37 183 54 HOH HOH . D 4 HOH A 38 184 55 HOH HOH . D 4 HOH A 39 185 56 HOH HOH . D 4 HOH A 40 186 58 HOH HOH . D 4 HOH A 41 187 67 HOH HOH . D 4 HOH A 42 188 68 HOH HOH . D 4 HOH A 43 189 69 HOH HOH . D 4 HOH A 44 190 70 HOH HOH . D 4 HOH A 45 191 71 HOH HOH . D 4 HOH A 46 192 72 HOH HOH . D 4 HOH A 47 193 73 HOH HOH . D 4 HOH A 48 194 75 HOH HOH . D 4 HOH A 49 195 76 HOH HOH . D 4 HOH A 50 196 78 HOH HOH . D 4 HOH A 51 197 79 HOH HOH . D 4 HOH A 52 198 80 HOH HOH . D 4 HOH A 53 199 81 HOH HOH . D 4 HOH A 54 200 82 HOH HOH . D 4 HOH A 55 201 83 HOH HOH . D 4 HOH A 56 202 89 HOH HOH . D 4 HOH A 57 203 90 HOH HOH . D 4 HOH A 58 204 91 HOH HOH . D 4 HOH A 59 205 92 HOH HOH . D 4 HOH A 60 206 93 HOH HOH . D 4 HOH A 61 207 94 HOH HOH . D 4 HOH A 62 208 95 HOH HOH . D 4 HOH A 63 209 98 HOH HOH . D 4 HOH A 64 210 101 HOH HOH . D 4 HOH A 65 211 103 HOH HOH . D 4 HOH A 66 212 104 HOH HOH . D 4 HOH A 67 213 105 HOH HOH . D 4 HOH A 68 214 106 HOH HOH . D 4 HOH A 69 215 107 HOH HOH . D 4 HOH A 70 216 108 HOH HOH . D 4 HOH A 71 217 111 HOH HOH . E 4 HOH B 1 19 19 HOH HOH . E 4 HOH B 2 25 25 HOH HOH . E 4 HOH B 3 26 26 HOH HOH . E 4 HOH B 4 27 27 HOH HOH . E 4 HOH B 5 28 28 HOH HOH . E 4 HOH B 6 29 29 HOH HOH . E 4 HOH B 7 30 30 HOH HOH . E 4 HOH B 8 31 31 HOH HOH . E 4 HOH B 9 32 32 HOH HOH . E 4 HOH B 10 33 33 HOH HOH . E 4 HOH B 11 37 37 HOH HOH . E 4 HOH B 12 40 40 HOH HOH . E 4 HOH B 13 41 41 HOH HOH . E 4 HOH B 14 42 42 HOH HOH . E 4 HOH B 15 43 43 HOH HOH . E 4 HOH B 16 45 45 HOH HOH . E 4 HOH B 17 49 49 HOH HOH . E 4 HOH B 18 57 57 HOH HOH . E 4 HOH B 19 59 59 HOH HOH . E 4 HOH B 20 60 60 HOH HOH . E 4 HOH B 21 61 61 HOH HOH . E 4 HOH B 22 62 62 HOH HOH . E 4 HOH B 23 63 63 HOH HOH . E 4 HOH B 24 64 64 HOH HOH . E 4 HOH B 25 65 65 HOH HOH . E 4 HOH B 26 66 66 HOH HOH . E 4 HOH B 27 74 74 HOH HOH . E 4 HOH B 28 77 77 HOH HOH . E 4 HOH B 29 84 84 HOH HOH . E 4 HOH B 30 85 85 HOH HOH . E 4 HOH B 31 86 86 HOH HOH . E 4 HOH B 32 87 87 HOH HOH . E 4 HOH B 33 88 88 HOH HOH . E 4 HOH B 34 96 96 HOH HOH . E 4 HOH B 35 97 97 HOH HOH . E 4 HOH B 36 99 99 HOH HOH . E 4 HOH B 37 100 100 HOH HOH . E 4 HOH B 38 102 102 HOH HOH . E 4 HOH B 39 109 109 HOH HOH . E 4 HOH B 40 110 110 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 26.618 _atom_site.Cartn_y 26.935 _atom_site.Cartn_z -10.12 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 2 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 146 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #