data_1AL6 # _model_server_result.job_id IO_WII0S8TiRlI4iK2osng _model_server_result.datetime_utc '2024-11-23 09:04:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1al6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":700}' # _entry.id 1AL6 # _exptl.entry_id 1AL6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 808.52 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'N-HYDROXYAMIDOCARBOXYMETHYLDETHIA COENZYME *A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 78.89 _cell.angle_gamma 90 _cell.entry_id 1AL6 _cell.length_a 104.43 _cell.length_b 78.48 _cell.length_c 58.45 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AL6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H39 N8 O18 P3' _chem_comp.formula_weight 808.52 _chem_comp.id HAX _chem_comp.mon_nstd_flag . _chem_comp.name 'N-HYDROXYAMIDOCARBOXYMETHYLDETHIA COENZYME *A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A HAX sing 129 n y N1A C6A HAX doub 130 n y C2A N3A HAX doub 131 n y C2A H2A HAX sing 132 n n N3A C4A HAX sing 133 n y C4A C5A HAX doub 134 n y C4A N9A HAX sing 135 n y C5A C6A HAX sing 136 n y C5A N7A HAX sing 137 n y C6A N6A HAX sing 138 n n N6A H61A HAX sing 139 n n N6A H62A HAX sing 140 n n N7A C8A HAX doub 141 n y C8A N9A HAX sing 142 n y C8A H8A HAX sing 143 n n N9A C1B HAX sing 144 n n C1B C2B HAX sing 145 n n C1B O4B HAX sing 146 n n C1B H1B HAX sing 147 n n C2B O2B HAX sing 148 n n C2B C3B HAX sing 149 n n C2B H2B HAX sing 150 n n O2B HO2A HAX sing 151 n n C3B O3B HAX sing 152 n n C3B C4B HAX sing 153 n n C3B H3B HAX sing 154 n n O3B P3B HAX sing 155 n n P3B O7A HAX doub 156 n n P3B O8A HAX sing 157 n n P3B O9A HAX sing 158 n n O8A HOA8 HAX sing 159 n n O9A HOA9 HAX sing 160 n n C4B O4B HAX sing 161 n n C4B C5B HAX sing 162 n n C4B H4B HAX sing 163 n n C5B O5B HAX sing 164 n n C5B H51A HAX sing 165 n n C5B H52A HAX sing 166 n n O5B P1A HAX sing 167 n n P1A O1A HAX doub 168 n n P1A O2A HAX sing 169 n n P1A O3A HAX sing 170 n n O2A HOA2 HAX sing 171 n n O3A P2A HAX sing 172 n n P2A O4A HAX doub 173 n n P2A O5A HAX sing 174 n n P2A O6A HAX sing 175 n n O5A HOA5 HAX sing 176 n n O6A CCP HAX sing 177 n n CBP CCP HAX sing 178 n n CBP CDP HAX sing 179 n n CBP CEP HAX sing 180 n n CBP CAP HAX sing 181 n n CCP H121 HAX sing 182 n n CCP H122 HAX sing 183 n n CDP H131 HAX sing 184 n n CDP H132 HAX sing 185 n n CDP H133 HAX sing 186 n n CEP H141 HAX sing 187 n n CEP H142 HAX sing 188 n n CEP H143 HAX sing 189 n n CAP OAP HAX sing 190 n n CAP C9P HAX sing 191 n n CAP H10 HAX sing 192 n n OAP HO1 HAX sing 193 n n C9P O9P HAX doub 194 n n C9P N8P HAX sing 195 n n N8P C7P HAX sing 196 n n N8P HN8 HAX sing 197 n n C7P C6P HAX sing 198 n n C7P H71 HAX sing 199 n n C7P H72 HAX sing 200 n n C6P C5P HAX sing 201 n n C6P H61 HAX sing 202 n n C6P H62 HAX sing 203 n n C5P O5P HAX doub 204 n n C5P N4P HAX sing 205 n n N4P C3P HAX sing 206 n n N4P HN4 HAX sing 207 n n C3P C2P HAX sing 208 n n C3P H31 HAX sing 209 n n C3P H32 HAX sing 210 n n C2P C1 HAX sing 211 n n C2P H21 HAX sing 212 n n C2P H22 HAX sing 213 n n C1 C2 HAX sing 214 n n C1 H11 HAX sing 215 n n C1 H12 HAX sing 216 n n C2 O2 HAX doub 217 n n C2 N2 HAX sing 218 n n N2 OH HAX sing 219 n n N2 HN2 HAX sing 220 n n OH HO HAX sing 221 n n # _atom_sites.entry_id 1AL6 _atom_sites.fract_transf_matrix[1][1] 0.009576 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] -0.00188 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012742 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017435 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 OAA A 1 702 702 OAA OAA . C 3 HAX A 1 700 700 HAX HAX . D 4 HOH A 1 501 501 HOH HOH . D 4 HOH A 2 502 502 HOH HOH . D 4 HOH A 3 503 503 HOH HOH . D 4 HOH A 4 504 504 HOH HOH . D 4 HOH A 5 506 506 HOH HOH . D 4 HOH A 6 507 507 HOH HOH . D 4 HOH A 7 508 508 HOH HOH . D 4 HOH A 8 509 509 HOH HOH . D 4 HOH A 9 510 510 HOH HOH . D 4 HOH A 10 511 511 HOH HOH . D 4 HOH A 11 512 512 HOH HOH . D 4 HOH A 12 513 513 HOH HOH . D 4 HOH A 13 514 514 HOH HOH . D 4 HOH A 14 515 515 HOH HOH . D 4 HOH A 15 516 516 HOH HOH . D 4 HOH A 16 517 517 HOH HOH . D 4 HOH A 17 518 518 HOH HOH . D 4 HOH A 18 519 519 HOH HOH . D 4 HOH A 19 520 520 HOH HOH . D 4 HOH A 20 521 521 HOH HOH . D 4 HOH A 21 522 522 HOH HOH . D 4 HOH A 22 523 523 HOH HOH . D 4 HOH A 23 524 524 HOH HOH . D 4 HOH A 24 526 526 HOH HOH . D 4 HOH A 25 527 527 HOH HOH . D 4 HOH A 26 528 528 HOH HOH . D 4 HOH A 27 529 529 HOH HOH . D 4 HOH A 28 530 530 HOH HOH . D 4 HOH A 29 532 532 HOH HOH . D 4 HOH A 30 533 533 HOH HOH . D 4 HOH A 31 534 534 HOH HOH . D 4 HOH A 32 535 535 HOH HOH . D 4 HOH A 33 536 536 HOH HOH . D 4 HOH A 34 537 537 HOH HOH . D 4 HOH A 35 538 538 HOH HOH . D 4 HOH A 36 539 539 HOH HOH . D 4 HOH A 37 540 540 HOH HOH . D 4 HOH A 38 541 541 HOH HOH . D 4 HOH A 39 542 542 HOH HOH . D 4 HOH A 40 543 543 HOH HOH . D 4 HOH A 41 544 544 HOH HOH . D 4 HOH A 42 545 545 HOH HOH . D 4 HOH A 43 546 546 HOH HOH . D 4 HOH A 44 547 547 HOH HOH . D 4 HOH A 45 548 548 HOH HOH . D 4 HOH A 46 549 549 HOH HOH . D 4 HOH A 47 550 550 HOH HOH . D 4 HOH A 48 555 555 HOH HOH . D 4 HOH A 49 559 559 HOH HOH . D 4 HOH A 50 561 561 HOH HOH . D 4 HOH A 51 562 562 HOH HOH . D 4 HOH A 52 566 566 HOH HOH . D 4 HOH A 53 568 568 HOH HOH . D 4 HOH A 54 570 570 HOH HOH . D 4 HOH A 55 571 571 HOH HOH . D 4 HOH A 56 574 574 HOH HOH . D 4 HOH A 57 575 575 HOH HOH . D 4 HOH A 58 578 578 HOH HOH . D 4 HOH A 59 580 580 HOH HOH . D 4 HOH A 60 581 581 HOH HOH . D 4 HOH A 61 582 582 HOH HOH . D 4 HOH A 62 583 583 HOH HOH . D 4 HOH A 63 584 584 HOH HOH . D 4 HOH A 64 585 585 HOH HOH . D 4 HOH A 65 586 586 HOH HOH . D 4 HOH A 66 587 587 HOH HOH . D 4 HOH A 67 588 588 HOH HOH . D 4 HOH A 68 589 589 HOH HOH . D 4 HOH A 69 590 590 HOH HOH . D 4 HOH A 70 591 591 HOH HOH . D 4 HOH A 71 592 592 HOH HOH . D 4 HOH A 72 593 593 HOH HOH . D 4 HOH A 73 595 595 HOH HOH . D 4 HOH A 74 596 596 HOH HOH . D 4 HOH A 75 597 597 HOH HOH . D 4 HOH A 76 598 598 HOH HOH . D 4 HOH A 77 599 599 HOH HOH . D 4 HOH A 78 601 601 HOH HOH . D 4 HOH A 79 602 602 HOH HOH . D 4 HOH A 80 603 603 HOH HOH . D 4 HOH A 81 604 604 HOH HOH . D 4 HOH A 82 605 605 HOH HOH . D 4 HOH A 83 606 606 HOH HOH . D 4 HOH A 84 610 610 HOH HOH . D 4 HOH A 85 611 611 HOH HOH . D 4 HOH A 86 612 612 HOH HOH . D 4 HOH A 87 613 613 HOH HOH . D 4 HOH A 88 614 614 HOH HOH . D 4 HOH A 89 615 615 HOH HOH . D 4 HOH A 90 616 616 HOH HOH . D 4 HOH A 91 617 617 HOH HOH . D 4 HOH A 92 618 618 HOH HOH . D 4 HOH A 93 619 619 HOH HOH . D 4 HOH A 94 620 620 HOH HOH . D 4 HOH A 95 621 621 HOH HOH . D 4 HOH A 96 622 622 HOH HOH . D 4 HOH A 97 623 623 HOH HOH . D 4 HOH A 98 624 624 HOH HOH . D 4 HOH A 99 625 625 HOH HOH . D 4 HOH A 100 626 626 HOH HOH . D 4 HOH A 101 627 627 HOH HOH . D 4 HOH A 102 628 628 HOH HOH . D 4 HOH A 103 629 629 HOH HOH . D 4 HOH A 104 630 630 HOH HOH . D 4 HOH A 105 631 631 HOH HOH . D 4 HOH A 106 632 632 HOH HOH . D 4 HOH A 107 633 633 HOH HOH . D 4 HOH A 108 634 634 HOH HOH . D 4 HOH A 109 635 635 HOH HOH . D 4 HOH A 110 636 636 HOH HOH . D 4 HOH A 111 637 637 HOH HOH . D 4 HOH A 112 638 638 HOH HOH . D 4 HOH A 113 639 639 HOH HOH . D 4 HOH A 114 640 640 HOH HOH . D 4 HOH A 115 642 642 HOH HOH . D 4 HOH A 116 643 643 HOH HOH . D 4 HOH A 117 644 644 HOH HOH . D 4 HOH A 118 645 645 HOH HOH . D 4 HOH A 119 646 646 HOH HOH . D 4 HOH A 120 647 647 HOH HOH . D 4 HOH A 121 648 648 HOH HOH . D 4 HOH A 122 649 649 HOH HOH . D 4 HOH A 123 650 650 HOH HOH . D 4 HOH A 124 651 651 HOH HOH . D 4 HOH A 125 652 652 HOH HOH . D 4 HOH A 126 653 653 HOH HOH . D 4 HOH A 127 654 654 HOH HOH . D 4 HOH A 128 655 655 HOH HOH . D 4 HOH A 129 656 656 HOH HOH . D 4 HOH A 130 657 657 HOH HOH . D 4 HOH A 131 658 658 HOH HOH . D 4 HOH A 132 659 659 HOH HOH . D 4 HOH A 133 660 660 HOH HOH . D 4 HOH A 134 661 661 HOH HOH . D 4 HOH A 135 662 662 HOH HOH . D 4 HOH A 136 663 663 HOH HOH . D 4 HOH A 137 664 664 HOH HOH . D 4 HOH A 138 665 665 HOH HOH . D 4 HOH A 139 666 666 HOH HOH . D 4 HOH A 140 667 667 HOH HOH . D 4 HOH A 141 668 668 HOH HOH . D 4 HOH A 142 669 669 HOH HOH . D 4 HOH A 143 670 670 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A HAX . . . C 3 19.519 -8.079 13.382 1 11.36 ? N1A HAX 700 A 1 HETATM 2 C C2A HAX . . . C 3 18.962 -8.66 14.449 1 15.66 ? C2A HAX 700 A 1 HETATM 3 N N3A HAX . . . C 3 18.12 -9.691 14.501 1 12.05 ? N3A HAX 700 A 1 HETATM 4 C C4A HAX . . . C 3 17.855 -10.177 13.267 1 36.71 ? C4A HAX 700 A 1 HETATM 5 C C5A HAX . . . C 3 18.356 -9.704 12.075 1 6.72 ? C5A HAX 700 A 1 HETATM 6 C C6A HAX . . . C 3 19.255 -8.603 12.154 1 9.64 ? C6A HAX 700 A 1 HETATM 7 N N6A HAX . . . C 3 19.757 -7.965 11.105 1 6.96 ? N6A HAX 700 A 1 HETATM 8 N N7A HAX . . . C 3 17.856 -10.468 11.007 1 10.9 ? N7A HAX 700 A 1 HETATM 9 C C8A HAX . . . C 3 17.058 -11.362 11.58 1 16.62 ? C8A HAX 700 A 1 HETATM 10 N N9A HAX . . . C 3 17.085 -11.285 12.943 1 14.14 ? N9A HAX 700 A 1 HETATM 11 C C1B HAX . . . C 3 16.174 -12.042 13.769 1 9.59 ? C1B HAX 700 A 1 HETATM 12 C C2B HAX . . . C 3 14.755 -11.773 13.297 1 8.64 ? C2B HAX 700 A 1 HETATM 13 O O2B HAX . . . C 3 14.298 -10.53 13.759 1 15.99 ? O2B HAX 700 A 1 HETATM 14 C C3B HAX . . . C 3 14.055 -12.935 13.978 1 9.62 ? C3B HAX 700 A 1 HETATM 15 O O3B HAX . . . C 3 13.964 -12.698 15.4 1 32.08 ? O3B HAX 700 A 1 HETATM 16 P P3B HAX . . . C 3 12.652 -13.129 16.23 1 51.39 ? P3B HAX 700 A 1 HETATM 17 O O7A HAX . . . C 3 11.497 -12.461 15.573 1 36.4 ? O7A HAX 700 A 1 HETATM 18 O O8A HAX . . . C 3 12.942 -12.922 17.681 1 75.05 ? O8A HAX 700 A 1 HETATM 19 O O9A HAX . . . C 3 12.555 -14.594 15.971 1 38.7 ? O9A HAX 700 A 1 HETATM 20 C C4B HAX . . . C 3 15.028 -14.076 13.69 1 9.61 ? C4B HAX 700 A 1 HETATM 21 O O4B HAX . . . C 3 16.311 -13.415 13.51 1 12.07 ? O4B HAX 700 A 1 HETATM 22 C C5B HAX . . . C 3 14.723 -14.841 12.426 1 14.79 ? C5B HAX 700 A 1 HETATM 23 O O5B HAX . . . C 3 14.405 -13.904 11.418 1 19.94 ? O5B HAX 700 A 1 HETATM 24 P P1A HAX . . . C 3 14.751 -14.301 9.9 1 12.78 ? P1A HAX 700 A 1 HETATM 25 O O1A HAX . . . C 3 13.868 -15.446 9.534 1 18.94 ? O1A HAX 700 A 1 HETATM 26 O O2A HAX . . . C 3 16.221 -14.476 9.834 1 9.31 ? O2A HAX 700 A 1 HETATM 27 O O3A HAX . . . C 3 14.489 -12.911 9.104 1 18.61 ? O3A HAX 700 A 1 HETATM 28 P P2A HAX . . . C 3 13.065 -12.625 8.372 1 14.37 ? P2A HAX 700 A 1 HETATM 29 O O4A HAX . . . C 3 13.029 -13.343 7.056 1 21.2 ? O4A HAX 700 A 1 HETATM 30 O O5A HAX . . . C 3 11.938 -12.695 9.34 1 10.44 ? O5A HAX 700 A 1 HETATM 31 O O6A HAX . . . C 3 13.29 -11.026 8.122 1 10.39 ? O6A HAX 700 A 1 HETATM 32 C CBP HAX . . . C 3 14.774 -9.203 7.589 1 6.93 ? CBP HAX 700 A 1 HETATM 33 C CCP HAX . . . C 3 14.315 -10.602 7.222 1 5.72 ? CCP HAX 700 A 1 HETATM 34 C CDP HAX . . . C 3 15.521 -8.592 6.372 1 2.17 ? CDP HAX 700 A 1 HETATM 35 C CEP HAX . . . C 3 13.538 -8.37 7.96 1 9.17 ? CEP HAX 700 A 1 HETATM 36 C CAP HAX . . . C 3 15.707 -9.314 8.784 1 5.77 ? CAP HAX 700 A 1 HETATM 37 O OAP HAX . . . C 3 16.919 -9.948 8.376 1 5.17 ? OAP HAX 700 A 1 HETATM 38 C C9P HAX . . . C 3 16.039 -7.953 9.37 1 12.67 ? C9P HAX 700 A 1 HETATM 39 O O9P HAX . . . C 3 15.307 -7.436 10.231 1 17.68 ? O9P HAX 700 A 1 HETATM 40 N N8P HAX . . . C 3 17.162 -7.416 8.931 1 11.77 ? N8P HAX 700 A 1 HETATM 41 C C7P HAX . . . C 3 17.612 -6.1 9.383 1 22.07 ? C7P HAX 700 A 1 HETATM 42 C C6P HAX . . . C 3 16.856 -5.005 8.634 1 8.93 ? C6P HAX 700 A 1 HETATM 43 C C5P HAX . . . C 3 17.333 -4.819 7.175 1 9.49 ? C5P HAX 700 A 1 HETATM 44 O O5P HAX . . . C 3 18.541 -4.825 6.898 1 9.37 ? O5P HAX 700 A 1 HETATM 45 N N4P HAX . . . C 3 16.353 -4.635 6.254 1 11.84 ? N4P HAX 700 A 1 HETATM 46 C C3P HAX . . . C 3 16.64 -4.41 4.838 1 13.16 ? C3P HAX 700 A 1 HETATM 47 C C2P HAX . . . C 3 16.558 -5.715 4.037 1 16.12 ? C2P HAX 700 A 1 HETATM 48 C C1 HAX . . . C 3 16.643 -5.622 2.491 1 7.75 ? C1 HAX 700 A 1 HETATM 49 C C2 HAX . . . C 3 15.604 -4.663 1.917 1 1 ? C2 HAX 700 A 1 HETATM 50 O O2 HAX . . . C 3 14.373 -4.895 1.956 1 7.44 ? O2 HAX 700 A 1 HETATM 51 N N2 HAX . . . C 3 16.09 -3.539 1.349 1 10.95 ? N2 HAX 700 A 1 HETATM 52 O OH HAX . . . C 3 15.214 -2.674 0.873 1 13.29 ? OH HAX 700 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 323 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 52 #