data_1ALK # _model_server_result.job_id qTvDDcjKHos3eDZWPfDPTQ _model_server_result.datetime_utc '2025-03-02 23:40:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1alk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":453}' # _entry.id 1ALK # _exptl.entry_id 1ALK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1ALK _cell.length_a 195.3 _cell.length_b 167.4 _cell.length_c 76.7 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ALK _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 168 A CYS 168 1_555 A SG CYS 178 A CYS 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? disulf ? disulf2 A SG CYS 286 A CYS 286 1_555 A SG CYS 336 A CYS 336 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? disulf ? disulf3 B SG CYS 168 B CYS 168 1_555 B SG CYS 178 B CYS 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? disulf ? disulf4 B SG CYS 286 B CYS 286 1_555 B SG CYS 336 B CYS 336 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc1 A OD1 ASP 51 A ASP 51 1_555 D ZN ZN . A ZN 451 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc2 A OD2 ASP 51 A ASP 51 1_555 E MG MG . A MG 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? metalc ? metalc3 A OG SER 102 A SER 102 1_555 D ZN ZN . A ZN 451 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc4 A OG1 THR 155 A THR 155 1_555 E MG MG . A MG 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc5 A OE2 GLU 322 A GLU 322 1_555 E MG MG . A MG 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.916 ? metalc ? metalc6 A OD1 ASP 327 A ASP 327 1_555 C ZN ZN . A ZN 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc7 A OD2 ASP 327 A ASP 327 1_555 C ZN ZN . A ZN 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc8 A NE2 HIS 331 A HIS 331 1_555 C ZN ZN . A ZN 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc9 A OD2 ASP 369 A ASP 369 1_555 D ZN ZN . A ZN 451 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.801 ? metalc ? metalc10 A NE2 HIS 370 A HIS 370 1_555 D ZN ZN . A ZN 451 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc11 A NE2 HIS 412 A HIS 412 1_555 C ZN ZN . A ZN 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc12 C ZN ZN . A ZN 450 1_555 F O1 PO4 . A PO4 453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.922 ? metalc ? metalc13 D ZN ZN . A ZN 451 1_555 F O2 PO4 . A PO4 453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.856 ? metalc ? metalc14 E MG MG . A MG 452 1_555 K O HOH . A HOH 455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? metalc ? metalc15 E MG MG . A MG 452 1_555 K O HOH . A HOH 456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc16 B OD1 ASP 51 B ASP 51 1_555 H ZN ZN . B ZN 451 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc17 B OD2 ASP 51 B ASP 51 1_555 I MG MG . B MG 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.964 ? metalc ? metalc18 B OG SER 102 B SER 102 1_555 H ZN ZN . B ZN 451 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc19 B OG1 THR 155 B THR 155 1_555 I MG MG . B MG 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc20 B OE2 GLU 322 B GLU 322 1_555 I MG MG . B MG 452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.93 ? metalc ? metalc21 B OD1 ASP 327 B ASP 327 1_555 G ZN ZN . B ZN 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc22 B NE2 HIS 331 B HIS 331 1_555 G ZN ZN . B ZN 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc23 B OD2 ASP 369 B ASP 369 1_555 H ZN ZN . B ZN 451 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.8 ? metalc ? metalc24 B NE2 HIS 370 B HIS 370 1_555 H ZN ZN . B ZN 451 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc25 B NE2 HIS 412 B HIS 412 1_555 G ZN ZN . B ZN 450 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc26 G ZN ZN . B ZN 450 1_555 J O4 PO4 . B PO4 453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc27 H ZN ZN . B ZN 451 1_555 J O2 PO4 . B PO4 453 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? metalc ? metalc28 I MG MG . B MG 452 1_555 L O HOH . B HOH 454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.926 ? metalc ? metalc29 I MG MG . B MG 452 1_555 L O HOH . B HOH 455 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc30 I MG MG . B MG 452 1_555 L O HOH . B HOH 456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 1ALK _atom_sites.fract_transf_matrix[1][1] 0.00512 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005974 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013038 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 450 450 ZN ZN . D 2 ZN A 1 451 451 ZN ZN . E 3 MG A 1 452 452 MG MG . F 4 PO4 A 1 453 453 PO4 PO4 . G 2 ZN B 1 450 450 ZN ZN . H 2 ZN B 1 451 451 ZN ZN . I 3 MG B 1 452 452 MG MG . J 4 PO4 B 1 453 453 PO4 PO4 . K 5 HOH A 1 454 454 HOH HOH . K 5 HOH A 2 455 455 HOH HOH . K 5 HOH A 3 456 456 HOH HOH . L 5 HOH B 1 454 454 HOH HOH . L 5 HOH B 2 455 455 HOH HOH . L 5 HOH B 3 456 456 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . J 4 51.002 17.125 31.641 1 19.06 ? P PO4 453 B 1 HETATM 2 O O1 PO4 . . . J 4 50.783 15.819 30.838 1 18.71 ? O1 PO4 453 B 1 HETATM 3 O O2 PO4 . . . J 4 52.28 17.79 31.07 1 19.37 ? O2 PO4 453 B 1 HETATM 4 O O3 PO4 . . . J 4 49.862 18.123 31.422 1 19.33 ? O3 PO4 453 B 1 HETATM 5 O O4 PO4 . . . J 4 51.194 16.8 33.076 1 16.94 ? O4 PO4 453 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #