data_1AMH # _model_server_result.job_id Zt4Fy2AD-usEgsxDD2-MZQ _model_server_result.datetime_utc '2025-07-03 14:27:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1amh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":246}' # _entry.id 1AMH # _exptl.entry_id 1AMH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.34 _cell.angle_gamma 90 _cell.entry_id 1AMH _cell.length_a 45.92 _cell.length_b 49.79 _cell.length_c 89.88 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AMH _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 137 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 A SG CYS 25 A CYS 42 1_555 A SG CYS 41 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 A SG CYS 109 A CYS 128 1_555 A SG CYS 210 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? disulf ? disulf4 A SG CYS 116 A CYS 136 1_555 A SG CYS 183 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.748 ? disulf ? disulf5 A SG CYS 148 A CYS 168 1_555 A SG CYS 162 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? disulf ? disulf6 A SG CYS 173 A CYS 191 1_555 A SG CYS 197 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf7 B SG CYS 7 B CYS 22 1_555 B SG CYS 137 B CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? disulf ? disulf8 B SG CYS 25 B CYS 42 1_555 B SG CYS 41 B CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf9 B SG CYS 109 B CYS 128 1_555 B SG CYS 210 B CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? disulf ? disulf10 B SG CYS 116 B CYS 136 1_555 B SG CYS 183 B CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf11 B SG CYS 148 B CYS 168 1_555 B SG CYS 162 B CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? disulf ? disulf12 B SG CYS 173 B CYS 191 1_555 B SG CYS 197 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc1 A OE2 GLU 52 A GLU 70 1_555 C CA CA . A CA 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc2 A O ASN 54 A ASN 72 1_555 C CA CA . A CA 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.571 ? metalc ? metalc3 A O VAL 57 A VAL 75 1_555 C CA CA . A CA 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc4 A OE2 GLU 59 A GLU 77 1_555 C CA CA . A CA 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? metalc ? metalc5 A OE2 GLU 62 A GLU 80 1_555 C CA CA . A CA 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? metalc ? metalc6 B OE2 GLU 52 B GLU 70 1_555 D CA CA . B CA 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? metalc ? metalc7 B O ASN 54 B ASN 72 1_555 D CA CA . B CA 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? metalc ? metalc8 B O VAL 57 B VAL 75 1_555 D CA CA . B CA 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? metalc ? metalc9 B OE1 GLU 59 B GLU 77 1_555 D CA CA . B CA 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc10 B OE2 GLU 62 B GLU 80 1_555 D CA CA . B CA 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? hydrog ? hydrog1 A N GLY 128 A GLY 148 1_555 B O PHE 24 B PHE 41 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog ? hydrog2 A OG SER 127 A SER 147 1_555 B O HIS 40 B HIS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1AMH _atom_sites.fract_transf_matrix[1][1] 0.021777 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002805 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020084 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011218 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 246 246 CA CA . D 2 CA B 1 246 246 CA CA . E 3 HOH A 1 247 5 HOH HOH . E 3 HOH A 2 248 6 HOH HOH . E 3 HOH A 3 249 8 HOH HOH . E 3 HOH A 4 250 9 HOH HOH . E 3 HOH A 5 251 11 HOH HOH . E 3 HOH A 6 252 12 HOH HOH . E 3 HOH A 7 253 13 HOH HOH . E 3 HOH A 8 254 14 HOH HOH . E 3 HOH A 9 255 15 HOH HOH . E 3 HOH A 10 256 16 HOH HOH . E 3 HOH A 11 257 17 HOH HOH . E 3 HOH A 12 258 18 HOH HOH . E 3 HOH A 13 259 20 HOH HOH . E 3 HOH A 14 260 22 HOH HOH . E 3 HOH A 15 261 23 HOH HOH . E 3 HOH A 16 262 27 HOH HOH . E 3 HOH A 17 263 31 HOH HOH . E 3 HOH A 18 264 32 HOH HOH . E 3 HOH A 19 265 34 HOH HOH . E 3 HOH A 20 266 35 HOH HOH . E 3 HOH A 21 267 36 HOH HOH . E 3 HOH A 22 268 40 HOH HOH . E 3 HOH A 23 269 44 HOH HOH . E 3 HOH A 24 270 45 HOH HOH . E 3 HOH A 25 271 47 HOH HOH . E 3 HOH A 26 272 49 HOH HOH . E 3 HOH A 27 273 50 HOH HOH . E 3 HOH A 28 274 53 HOH HOH . E 3 HOH A 29 275 54 HOH HOH . E 3 HOH A 30 276 55 HOH HOH . E 3 HOH A 31 277 57 HOH HOH . E 3 HOH A 32 278 59 HOH HOH . E 3 HOH A 33 279 60 HOH HOH . E 3 HOH A 34 280 61 HOH HOH . E 3 HOH A 35 281 62 HOH HOH . E 3 HOH A 36 282 64 HOH HOH . E 3 HOH A 37 283 65 HOH HOH . E 3 HOH A 38 284 67 HOH HOH . E 3 HOH A 39 285 68 HOH HOH . E 3 HOH A 40 286 69 HOH HOH . E 3 HOH A 41 287 72 HOH HOH . E 3 HOH A 42 288 77 HOH HOH . E 3 HOH A 43 289 79 HOH HOH . E 3 HOH A 44 290 80 HOH HOH . E 3 HOH A 45 291 81 HOH HOH . E 3 HOH A 46 292 83 HOH HOH . E 3 HOH A 47 293 84 HOH HOH . E 3 HOH A 48 294 88 HOH HOH . E 3 HOH A 49 295 90 HOH HOH . E 3 HOH A 50 296 94 HOH HOH . E 3 HOH A 51 297 99 HOH HOH . E 3 HOH A 52 298 101 HOH HOH . E 3 HOH A 53 299 103 HOH HOH . E 3 HOH A 54 300 104 HOH HOH . E 3 HOH A 55 301 107 HOH HOH . E 3 HOH A 56 302 114 HOH HOH . E 3 HOH A 57 303 115 HOH HOH . E 3 HOH A 58 304 118 HOH HOH . E 3 HOH A 59 305 119 HOH HOH . E 3 HOH A 60 306 120 HOH HOH . E 3 HOH A 61 307 122 HOH HOH . E 3 HOH A 62 308 126 HOH HOH . F 3 HOH B 1 247 1 HOH HOH . F 3 HOH B 2 248 2 HOH HOH . F 3 HOH B 3 249 3 HOH HOH . F 3 HOH B 4 250 4 HOH HOH . F 3 HOH B 5 251 7 HOH HOH . F 3 HOH B 6 252 10 HOH HOH . F 3 HOH B 7 253 19 HOH HOH . F 3 HOH B 8 254 21 HOH HOH . F 3 HOH B 9 255 24 HOH HOH . F 3 HOH B 10 256 25 HOH HOH . F 3 HOH B 11 257 26 HOH HOH . F 3 HOH B 12 258 28 HOH HOH . F 3 HOH B 13 259 29 HOH HOH . F 3 HOH B 14 260 30 HOH HOH . F 3 HOH B 15 261 33 HOH HOH . F 3 HOH B 16 262 37 HOH HOH . F 3 HOH B 17 263 38 HOH HOH . F 3 HOH B 18 264 39 HOH HOH . F 3 HOH B 19 265 41 HOH HOH . F 3 HOH B 20 266 42 HOH HOH . F 3 HOH B 21 267 43 HOH HOH . F 3 HOH B 22 268 46 HOH HOH . F 3 HOH B 23 269 48 HOH HOH . F 3 HOH B 24 270 51 HOH HOH . F 3 HOH B 25 271 52 HOH HOH . F 3 HOH B 26 272 56 HOH HOH . F 3 HOH B 27 273 58 HOH HOH . F 3 HOH B 28 274 63 HOH HOH . F 3 HOH B 29 275 66 HOH HOH . F 3 HOH B 30 276 70 HOH HOH . F 3 HOH B 31 277 71 HOH HOH . F 3 HOH B 32 278 73 HOH HOH . F 3 HOH B 33 279 74 HOH HOH . F 3 HOH B 34 280 75 HOH HOH . F 3 HOH B 35 281 76 HOH HOH . F 3 HOH B 36 282 78 HOH HOH . F 3 HOH B 37 283 82 HOH HOH . F 3 HOH B 38 284 85 HOH HOH . F 3 HOH B 39 285 86 HOH HOH . F 3 HOH B 40 286 87 HOH HOH . F 3 HOH B 41 287 89 HOH HOH . F 3 HOH B 42 288 91 HOH HOH . F 3 HOH B 43 289 92 HOH HOH . F 3 HOH B 44 290 93 HOH HOH . F 3 HOH B 45 291 95 HOH HOH . F 3 HOH B 46 292 96 HOH HOH . F 3 HOH B 47 293 97 HOH HOH . F 3 HOH B 48 294 98 HOH HOH . F 3 HOH B 49 295 100 HOH HOH . F 3 HOH B 50 296 102 HOH HOH . F 3 HOH B 51 297 105 HOH HOH . F 3 HOH B 52 298 106 HOH HOH . F 3 HOH B 53 299 108 HOH HOH . F 3 HOH B 54 300 109 HOH HOH . F 3 HOH B 55 301 110 HOH HOH . F 3 HOH B 56 302 111 HOH HOH . F 3 HOH B 57 303 112 HOH HOH . F 3 HOH B 58 304 113 HOH HOH . F 3 HOH B 59 305 116 HOH HOH . F 3 HOH B 60 306 117 HOH HOH . F 3 HOH B 61 307 121 HOH HOH . F 3 HOH B 62 308 123 HOH HOH . F 3 HOH B 63 309 124 HOH HOH . F 3 HOH B 64 310 125 HOH HOH . F 3 HOH B 65 311 127 HOH HOH . F 3 HOH B 66 312 128 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 31.385 _atom_site.Cartn_y 23.514 _atom_site.Cartn_z 23.89 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30.69 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 246 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #