data_1AN5 # _model_server_result.job_id yeUmiUSojgps7W4J3Q1mjA _model_server_result.datetime_utc '2024-11-27 14:25:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1an5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":684}' # _entry.id 1AN5 # _exptl.entry_id 1AN5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 477.469 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '10-PROPARGYL-5,8-DIDEAZAFOLIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1AN5 _cell.length_a 127.3 _cell.length_b 127.3 _cell.length_c 67.93 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AN5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C FMT 1 A FMT 0 1_555 A N MET 2 A MET 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A O1 FMT 1 A FMT 0 1_555 A N MET 2 A MET 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? covale ? covale3 B C FMT 1 B FMT 0 1_555 B N MET 2 B MET 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? # _chem_comp.formula 'C24 H23 N5 O6' _chem_comp.formula_weight 477.469 _chem_comp.id CB3 _chem_comp.mon_nstd_flag . _chem_comp.name '10-PROPARGYL-5,8-DIDEAZAFOLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1AN5 _atom_sites.fract_transf_matrix[1][1] 0.007855 _atom_sites.fract_transf_matrix[1][2] 0.004535 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009071 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014721 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 686 686 PO4 PO4 . D 3 CB3 A 1 684 684 CB3 CB3 . E 2 PO4 B 1 687 687 PO4 PO4 . F 3 CB3 B 1 685 685 CB3 CB3 . G 4 HOH A 1 704 704 HOH HOH . G 4 HOH A 2 706 706 HOH HOH . G 4 HOH A 3 709 709 HOH HOH . G 4 HOH A 4 713 713 HOH HOH . G 4 HOH A 5 716 716 HOH HOH . G 4 HOH A 6 719 719 HOH HOH . G 4 HOH A 7 722 722 HOH HOH . G 4 HOH A 8 723 723 HOH HOH . G 4 HOH A 9 724 724 HOH HOH . G 4 HOH A 10 725 725 HOH HOH . G 4 HOH A 11 726 726 HOH HOH . G 4 HOH A 12 727 727 HOH HOH . G 4 HOH A 13 733 733 HOH HOH . G 4 HOH A 14 734 734 HOH HOH . G 4 HOH A 15 736 736 HOH HOH . G 4 HOH A 16 738 738 HOH HOH . G 4 HOH A 17 740 740 HOH HOH . G 4 HOH A 18 741 741 HOH HOH . G 4 HOH A 19 742 742 HOH HOH . G 4 HOH A 20 744 744 HOH HOH . G 4 HOH A 21 745 745 HOH HOH . G 4 HOH A 22 749 749 HOH HOH . G 4 HOH A 23 751 751 HOH HOH . G 4 HOH A 24 755 755 HOH HOH . G 4 HOH A 25 759 759 HOH HOH . G 4 HOH A 26 760 760 HOH HOH . G 4 HOH A 27 766 766 HOH HOH . G 4 HOH A 28 767 767 HOH HOH . G 4 HOH A 29 768 768 HOH HOH . G 4 HOH A 30 770 770 HOH HOH . G 4 HOH A 31 771 771 HOH HOH . G 4 HOH A 32 773 773 HOH HOH . G 4 HOH A 33 775 775 HOH HOH . G 4 HOH A 34 777 777 HOH HOH . G 4 HOH A 35 778 778 HOH HOH . G 4 HOH A 36 779 779 HOH HOH . G 4 HOH A 37 781 781 HOH HOH . G 4 HOH A 38 782 782 HOH HOH . G 4 HOH A 39 784 784 HOH HOH . G 4 HOH A 40 785 785 HOH HOH . G 4 HOH A 41 788 788 HOH HOH . G 4 HOH A 42 789 789 HOH HOH . G 4 HOH A 43 790 790 HOH HOH . G 4 HOH A 44 791 791 HOH HOH . G 4 HOH A 45 793 793 HOH HOH . G 4 HOH A 46 794 794 HOH HOH . G 4 HOH A 47 796 796 HOH HOH . G 4 HOH A 48 797 797 HOH HOH . G 4 HOH A 49 798 798 HOH HOH . G 4 HOH A 50 799 799 HOH HOH . G 4 HOH A 51 800 800 HOH HOH . G 4 HOH A 52 801 801 HOH HOH . G 4 HOH A 53 802 802 HOH HOH . G 4 HOH A 54 804 804 HOH HOH . G 4 HOH A 55 805 805 HOH HOH . G 4 HOH A 56 806 806 HOH HOH . G 4 HOH A 57 807 807 HOH HOH . G 4 HOH A 58 808 808 HOH HOH . G 4 HOH A 59 809 809 HOH HOH . G 4 HOH A 60 811 811 HOH HOH . G 4 HOH A 61 812 812 HOH HOH . G 4 HOH A 62 813 813 HOH HOH . G 4 HOH A 63 814 814 HOH HOH . G 4 HOH A 64 815 815 HOH HOH . G 4 HOH A 65 816 816 HOH HOH . G 4 HOH A 66 817 817 HOH HOH . G 4 HOH A 67 818 818 HOH HOH . G 4 HOH A 68 819 819 HOH HOH . G 4 HOH A 69 820 820 HOH HOH . G 4 HOH A 70 821 821 HOH HOH . G 4 HOH A 71 822 822 HOH HOH . G 4 HOH A 72 823 823 HOH HOH . G 4 HOH A 73 824 824 HOH HOH . G 4 HOH A 74 825 825 HOH HOH . G 4 HOH A 75 826 826 HOH HOH . G 4 HOH A 76 827 827 HOH HOH . G 4 HOH A 77 828 828 HOH HOH . G 4 HOH A 78 829 829 HOH HOH . G 4 HOH A 79 830 830 HOH HOH . G 4 HOH A 80 831 831 HOH HOH . G 4 HOH A 81 833 833 HOH HOH . G 4 HOH A 82 834 834 HOH HOH . G 4 HOH A 83 835 835 HOH HOH . G 4 HOH A 84 836 836 HOH HOH . G 4 HOH A 85 837 837 HOH HOH . G 4 HOH A 86 838 838 HOH HOH . G 4 HOH A 87 839 839 HOH HOH . G 4 HOH A 88 840 840 HOH HOH . G 4 HOH A 89 852 852 HOH HOH . G 4 HOH A 90 853 853 HOH HOH . G 4 HOH A 91 854 854 HOH HOH . G 4 HOH A 92 855 855 HOH HOH . G 4 HOH A 93 856 856 HOH HOH . G 4 HOH A 94 859 859 HOH HOH . G 4 HOH A 95 863 863 HOH HOH . G 4 HOH A 96 864 864 HOH HOH . G 4 HOH A 97 865 865 HOH HOH . G 4 HOH A 98 866 866 HOH HOH . G 4 HOH A 99 868 868 HOH HOH . G 4 HOH A 100 869 869 HOH HOH . G 4 HOH A 101 870 870 HOH HOH . G 4 HOH A 102 871 871 HOH HOH . G 4 HOH A 103 872 872 HOH HOH . G 4 HOH A 104 873 873 HOH HOH . H 4 HOH B 1 700 700 HOH HOH . H 4 HOH B 2 701 701 HOH HOH . H 4 HOH B 3 702 702 HOH HOH . H 4 HOH B 4 703 703 HOH HOH . H 4 HOH B 5 705 705 HOH HOH . H 4 HOH B 6 707 707 HOH HOH . H 4 HOH B 7 708 708 HOH HOH . H 4 HOH B 8 710 710 HOH HOH . H 4 HOH B 9 711 711 HOH HOH . H 4 HOH B 10 712 712 HOH HOH . H 4 HOH B 11 714 714 HOH HOH . H 4 HOH B 12 715 715 HOH HOH . H 4 HOH B 13 717 717 HOH HOH . H 4 HOH B 14 718 718 HOH HOH . H 4 HOH B 15 720 720 HOH HOH . H 4 HOH B 16 721 721 HOH HOH . H 4 HOH B 17 728 728 HOH HOH . H 4 HOH B 18 729 729 HOH HOH . H 4 HOH B 19 730 730 HOH HOH . H 4 HOH B 20 731 731 HOH HOH . H 4 HOH B 21 732 732 HOH HOH . H 4 HOH B 22 735 735 HOH HOH . H 4 HOH B 23 737 737 HOH HOH . H 4 HOH B 24 739 739 HOH HOH . H 4 HOH B 25 743 743 HOH HOH . H 4 HOH B 26 746 746 HOH HOH . H 4 HOH B 27 747 747 HOH HOH . H 4 HOH B 28 748 748 HOH HOH . H 4 HOH B 29 750 750 HOH HOH . H 4 HOH B 30 752 752 HOH HOH . H 4 HOH B 31 753 753 HOH HOH . H 4 HOH B 32 754 754 HOH HOH . H 4 HOH B 33 756 756 HOH HOH . H 4 HOH B 34 757 757 HOH HOH . H 4 HOH B 35 758 758 HOH HOH . H 4 HOH B 36 761 761 HOH HOH . H 4 HOH B 37 762 762 HOH HOH . H 4 HOH B 38 763 763 HOH HOH . H 4 HOH B 39 764 764 HOH HOH . H 4 HOH B 40 765 765 HOH HOH . H 4 HOH B 41 769 769 HOH HOH . H 4 HOH B 42 772 772 HOH HOH . H 4 HOH B 43 774 774 HOH HOH . H 4 HOH B 44 776 776 HOH HOH . H 4 HOH B 45 780 780 HOH HOH . H 4 HOH B 46 783 783 HOH HOH . H 4 HOH B 47 786 786 HOH HOH . H 4 HOH B 48 787 787 HOH HOH . H 4 HOH B 49 792 792 HOH HOH . H 4 HOH B 50 803 803 HOH HOH . H 4 HOH B 51 810 810 HOH HOH . H 4 HOH B 52 841 841 HOH HOH . H 4 HOH B 53 842 842 HOH HOH . H 4 HOH B 54 843 843 HOH HOH . H 4 HOH B 55 844 844 HOH HOH . H 4 HOH B 56 845 845 HOH HOH . H 4 HOH B 57 846 846 HOH HOH . H 4 HOH B 58 847 847 HOH HOH . H 4 HOH B 59 848 848 HOH HOH . H 4 HOH B 60 849 849 HOH HOH . H 4 HOH B 61 850 850 HOH HOH . H 4 HOH B 62 851 851 HOH HOH . H 4 HOH B 63 857 857 HOH HOH . H 4 HOH B 64 858 858 HOH HOH . H 4 HOH B 65 860 860 HOH HOH . H 4 HOH B 66 861 861 HOH HOH . H 4 HOH B 67 862 862 HOH HOH . H 4 HOH B 68 867 867 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 CB3 . . . D 3 16.792 18.431 28.232 1 28.67 ? N1 CB3 684 A 1 HETATM 2 C C2 CB3 . . . D 3 17.947 18.731 27.642 1 27.57 ? C2 CB3 684 A 1 HETATM 3 N NA2 CB3 . . . D 3 17.899 19.628 26.688 1 29.66 ? NA2 CB3 684 A 1 HETATM 4 N N3 CB3 . . . D 3 19.092 18.11 27.981 1 29.86 ? N3 CB3 684 A 1 HETATM 5 C C4 CB3 . . . D 3 19.081 17.094 28.874 1 28.89 ? C4 CB3 684 A 1 HETATM 6 O O4 CB3 . . . D 3 20.276 16.569 29.322 1 27.57 ? O4 CB3 684 A 1 HETATM 7 C C4A CB3 . . . D 3 17.862 16.606 29.35 1 29.02 ? C4A CB3 684 A 1 HETATM 8 C C5 CB3 . . . D 3 17.768 15.424 30.101 1 30.55 ? C5 CB3 684 A 1 HETATM 9 C C6 CB3 . . . D 3 16.503 14.931 30.456 1 29.08 ? C6 CB3 684 A 1 HETATM 10 C C7 CB3 . . . D 3 15.361 15.651 30.07 1 29.45 ? C7 CB3 684 A 1 HETATM 11 C C8 CB3 . . . D 3 15.425 16.841 29.346 1 29.44 ? C8 CB3 684 A 1 HETATM 12 C C8A CB3 . . . D 3 16.692 17.318 28.979 1 29.92 ? C8A CB3 684 A 1 HETATM 13 C C9 CB3 . . . D 3 16.186 13.905 31.422 1 26.5 ? C9 CB3 684 A 1 HETATM 14 N N10 CB3 . . . D 3 16.911 13.711 32.692 1 25.81 ? N10 CB3 684 A 1 HETATM 15 C C11 CB3 . . . D 3 13.962 13.523 35.708 1 33.77 ? C11 CB3 684 A 1 HETATM 16 C C12 CB3 . . . D 3 13.671 13.368 34.373 1 30.59 ? C12 CB3 684 A 1 HETATM 17 C C13 CB3 . . . D 3 14.676 13.454 33.461 1 29.23 ? C13 CB3 684 A 1 HETATM 18 C C14 CB3 . . . D 3 16.029 13.703 33.757 1 27.74 ? C14 CB3 684 A 1 HETATM 19 C C15 CB3 . . . D 3 16.326 13.902 35.132 1 26.7 ? C15 CB3 684 A 1 HETATM 20 C C16 CB3 . . . D 3 15.299 13.807 36.101 1 28.48 ? C16 CB3 684 A 1 HETATM 21 C C CB3 . . . D 3 12.811 13.239 36.553 1 38.05 ? C CB3 684 A 1 HETATM 22 O O CB3 . . . D 3 11.696 12.972 36.071 1 38.25 ? O CB3 684 A 1 HETATM 23 N N CB3 . . . D 3 13.01 13.218 37.867 1 43.24 ? N CB3 684 A 1 HETATM 24 C CA CB3 . . . D 3 12.404 12.159 38.694 1 51.7 ? CA CB3 684 A 1 HETATM 25 C CB CB3 . . . D 3 13.328 10.925 38.645 1 54.16 ? CB CB3 684 A 1 HETATM 26 C CG CB3 . . . D 3 12.742 9.632 39.251 1 57.93 ? CG CB3 684 A 1 HETATM 27 C CD CB3 . . . D 3 13.647 8.399 39.076 1 58.65 ? CD CB3 684 A 1 HETATM 28 O OE1 CB3 . . . D 3 13.599 7.481 39.928 1 58.04 ? OE1 CB3 684 A 1 HETATM 29 O OE2 CB3 . . . D 3 14.398 8.329 38.082 1 58.65 ? OE2 CB3 684 A 1 HETATM 30 C CT CB3 . . . D 3 12.433 12.827 40.07 1 54.59 ? CT CB3 684 A 1 HETATM 31 O O1 CB3 . . . D 3 13.53 13.277 40.473 1 56.66 ? O1 CB3 684 A 1 HETATM 32 O O2 CB3 . . . D 3 11.356 12.949 40.702 1 59.65 ? O2 CB3 684 A 1 HETATM 33 C CP1 CB3 . . . D 3 18.372 13.629 32.787 1 27.29 ? CP1 CB3 684 A 1 HETATM 34 C CP2 CB3 . . . D 3 18.969 14.898 33.241 1 27.81 ? CP2 CB3 684 A 1 HETATM 35 C CP3 CB3 . . . D 3 19.329 15.963 33.658 1 25.61 ? CP3 CB3 684 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 238 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 35 #