data_1APH # _model_server_result.job_id cJs9PoCm8KxbmSidtRKhRA _model_server_result.datetime_utc '2024-11-24 18:15:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1aph # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":200}' # _entry.id 1APH # _exptl.entry_id 1APH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 98.959 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-DICHLOROETHANE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1APH _cell.length_a 78.9 _cell.length_b 78.9 _cell.length_c 78.9 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1APH _symmetry.cell_setting ? _symmetry.Int_Tables_number 199 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 21 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 PISA tetrameric 4 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 2 1,2 A,B,C,D,E 3 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 16_565 x,-y+1,-z+1/2 1 0 0 0 -1 0 0 0 -1 0 78.9 39.45 3 'crystal symmetry operation' 15_556 -x+1/2,y,-z+1 -1 0 0 0 1 0 0 0 -1 39.45 0 78.9 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 11 A CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.927 ? disulf ? disulf2 A SG CYS 7 A CYS 7 1_555 B SG CYS 7 B CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? disulf ? disulf3 A SG CYS 20 A CYS 20 1_555 B SG CYS 19 B CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? # _chem_comp.formula 'C2 H4 Cl2' _chem_comp.formula_weight 98.959 _chem_comp.id DCE _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-DICHLOROETHANE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE DICHLORIDE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL1 C1 DCE sing 68 n n C1 C2 DCE sing 69 n n C1 H11 DCE sing 70 n n C1 H12 DCE sing 71 n n C2 CL2 DCE sing 72 n n C2 H21 DCE sing 73 n n C2 H22 DCE sing 74 n n # _atom_sites.entry_id 1APH _atom_sites.fract_transf_matrix[1][1] 0.012674 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012674 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012674 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 DCE B 1 200 200 DCE DCE . D 4 HOH A 1 22 3 HOH HOH . D 4 HOH A 2 23 11 HOH HOH . D 4 HOH A 3 24 12 HOH HOH . D 4 HOH A 4 25 14 HOH HOH . D 4 HOH A 5 26 17 HOH HOH . D 4 HOH A 6 27 19 HOH HOH . D 4 HOH A 7 28 21 HOH HOH . D 4 HOH A 8 29 25 HOH HOH . D 4 HOH A 9 30 27 HOH HOH . D 4 HOH A 10 31 29 HOH HOH . D 4 HOH A 11 32 30 HOH HOH . D 4 HOH A 12 33 31 HOH HOH . D 4 HOH A 13 34 34 HOH HOH . D 4 HOH A 14 35 36 HOH HOH . D 4 HOH A 15 36 38 HOH HOH . D 4 HOH A 16 37 39 HOH HOH . D 4 HOH A 17 38 40 HOH HOH . D 4 HOH A 18 39 46 HOH HOH . D 4 HOH A 19 40 50 HOH HOH . D 4 HOH A 20 41 52 HOH HOH . D 4 HOH A 21 42 53 HOH HOH . D 4 HOH A 22 43 56 HOH HOH . E 4 HOH B 1 201 1 HOH HOH . E 4 HOH B 2 202 2 HOH HOH . E 4 HOH B 3 203 4 HOH HOH . E 4 HOH B 4 204 5 HOH HOH . E 4 HOH B 5 205 6 HOH HOH . E 4 HOH B 6 206 7 HOH HOH . E 4 HOH B 7 207 8 HOH HOH . E 4 HOH B 8 208 9 HOH HOH . E 4 HOH B 9 209 10 HOH HOH . E 4 HOH B 10 210 13 HOH HOH . E 4 HOH B 11 211 15 HOH HOH . E 4 HOH B 12 212 16 HOH HOH . E 4 HOH B 13 213 18 HOH HOH . E 4 HOH B 14 214 20 HOH HOH . E 4 HOH B 15 215 22 HOH HOH . E 4 HOH B 16 216 23 HOH HOH . E 4 HOH B 17 217 24 HOH HOH . E 4 HOH B 18 218 26 HOH HOH . E 4 HOH B 19 219 28 HOH HOH . E 4 HOH B 20 220 32 HOH HOH . E 4 HOH B 21 221 33 HOH HOH . E 4 HOH B 22 222 35 HOH HOH . E 4 HOH B 23 223 37 HOH HOH . E 4 HOH B 24 224 41 HOH HOH . E 4 HOH B 25 225 42 HOH HOH . E 4 HOH B 26 226 43 HOH HOH . E 4 HOH B 27 227 44 HOH HOH . E 4 HOH B 28 228 45 HOH HOH . E 4 HOH B 29 229 47 HOH HOH . E 4 HOH B 30 230 48 HOH HOH . E 4 HOH B 31 231 49 HOH HOH . E 4 HOH B 32 232 51 HOH HOH . E 4 HOH B 33 233 54 HOH HOH . E 4 HOH B 34 234 55 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CL CL1 DCE . . . C 3 27.222 41.17 19.416 0.44 31.16 ? CL1 DCE 200 B 1 HETATM 2 C C1 DCE . . . C 3 28.321 40.074 20.265 0.44 19.71 ? C1 DCE 200 B 1 HETATM 3 C C2 DCE . . . C 3 28.48 38.802 19.396 0.44 19.97 ? C2 DCE 200 B 1 HETATM 4 CL CL2 DCE . . . C 3 27.086 37.654 19.915 0.44 31.64 ? CL2 DCE 200 B 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #