data_1AR1
#
_model_server_result.job_id            5ztXFbNzS-0tKB6tdu4lVQ 
_model_server_result.datetime_utc      '2024-11-02 20:27:36' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1ar1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":568}' 
#
_entry.id    1AR1 
#
_exptl.entry_id    1AR1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              229.402 
_entity.id                          9 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'LAURYL DIMETHYLAMINE-N-OXIDE' 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1AR1 
_cell.length_a            93.5 
_cell.length_b            151 
_cell.length_c            156.7 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1AR1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 9 J N N 
? 9 K N N 
? 9 L N N 
? 9 M N N 
? 9 N N N 
? 9 O N N 
? 9 R N N 
? 9 S N N 
? 9 T N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 66 A CYS 66 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf2 C SG CYS 22 C CYS 22 1_555 C SG CYS 96 C CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf3 D SG CYS 23 D CYS 23 1_555 D SG CYS 88 D CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
metalc ? metalc1 A O GLU 56 A GLU 56 1_555 G CA CA . A CA 561 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? 
metalc ? metalc2 A OE2 GLU 56 A GLU 56 1_555 G CA CA . A CA 561 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? 
metalc ? metalc3 A O HIS 59 A HIS 59 1_555 G CA CA . A CA 561 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? 
metalc ? metalc4 A O GLY 61 A GLY 61 1_555 G CA CA . A CA 561 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? 
metalc ? metalc5 A OE1 GLN 63 A GLN 63 1_555 G CA CA . A CA 561 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? 
metalc ? metalc6 A NE2 HIS 94 A HIS 94 1_555 H FE HEA . A HEA 562 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? 
metalc ? metalc7 A ND1 HIS 276 A HIS 276 1_555 E CU CU . A CU 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? 
metalc ? metalc8 A NE2 HIS 325 A HIS 325 1_555 E CU CU . A CU 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? 
metalc ? metalc9 A NE2 HIS 326 A HIS 326 1_555 E CU CU . A CU 559 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? 
metalc ? metalc10 A NE2 HIS 403 A HIS 403 1_555 F MG MG . A MG 560 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? 
metalc ? metalc11 A OD1 ASP 404 A ASP 404 1_555 F MG MG . A MG 560 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? 
metalc ? metalc12 A NE2 HIS 411 A HIS 411 1_555 I FE HEA . A HEA 563 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? 
metalc ? metalc13 A NE2 HIS 413 A HIS 413 1_555 H FE HEA . A HEA 562 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.133 ? 
metalc ? metalc14 A OD1 ASP 477 A ASP 477 1_555 G CA CA . A CA 561 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.376 ? 
metalc ? metalc15 F MG MG . A MG 560 1_555 U O HOH . A HOH 574 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? 
metalc ? metalc16 F MG MG . A MG 560 1_555 B OE1 GLU 247 B GLU 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
metalc ? metalc17 F MG MG . A MG 560 1_555 B OE2 GLU 247 B GLU 218 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.109 ? 
metalc ? metalc18 B ND1 HIS 210 B HIS 181 1_555 Q CU CU . B CU 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? 
metalc ? metalc19 B SG CYS 245 B CYS 216 1_555 P CU CU . B CU 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? 
metalc ? metalc20 B SG CYS 245 B CYS 216 1_555 Q CU CU . B CU 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? 
metalc ? metalc21 B O GLU 247 B GLU 218 1_555 P CU CU . B CU 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.765 ? 
metalc ? metalc22 B SG CYS 249 B CYS 220 1_555 P CU CU . B CU 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? 
metalc ? metalc23 B SG CYS 249 B CYS 220 1_555 Q CU CU . B CU 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? 
metalc ? metalc24 B ND1 HIS 253 B HIS 224 1_555 P CU CU . B CU 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? 
metalc ? metalc25 B SD MET 256 B MET 227 1_555 Q CU CU . B CU 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? 
metalc ? metalc26 P CU CU . B CU 270 1_555 Q CU CU . B CU 271 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? 
#
_chem_comp.formula           'C14 H31 N O' 
_chem_comp.formula_weight    229.402 
_chem_comp.id                LDA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'LAURYL DIMETHYLAMINE-N-OXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 O1 LDA sing 296 n n 
N1 CM1 LDA sing 297 n n 
N1 CM2 LDA sing 298 n n 
N1 C1 LDA sing 299 n n 
CM1 HM11 LDA sing 300 n n 
CM1 HM12 LDA sing 301 n n 
CM1 HM13 LDA sing 302 n n 
CM2 HM21 LDA sing 303 n n 
CM2 HM22 LDA sing 304 n n 
CM2 HM23 LDA sing 305 n n 
C1 C2 LDA sing 306 n n 
C1 H11 LDA sing 307 n n 
C1 H12 LDA sing 308 n n 
C2 C3 LDA sing 309 n n 
C2 H21 LDA sing 310 n n 
C2 H22 LDA sing 311 n n 
C3 C4 LDA sing 312 n n 
C3 H31 LDA sing 313 n n 
C3 H32 LDA sing 314 n n 
C4 C5 LDA sing 315 n n 
C4 H41 LDA sing 316 n n 
C4 H42 LDA sing 317 n n 
C5 C6 LDA sing 318 n n 
C5 H51 LDA sing 319 n n 
C5 H52 LDA sing 320 n n 
C6 C7 LDA sing 321 n n 
C6 H61 LDA sing 322 n n 
C6 H62 LDA sing 323 n n 
C7 C8 LDA sing 324 n n 
C7 H71 LDA sing 325 n n 
C7 H72 LDA sing 326 n n 
C8 C9 LDA sing 327 n n 
C8 H81 LDA sing 328 n n 
C8 H82 LDA sing 329 n n 
C9 C10 LDA sing 330 n n 
C9 H91 LDA sing 331 n n 
C9 H92 LDA sing 332 n n 
C10 C11 LDA sing 333 n n 
C10 H101 LDA sing 334 n n 
C10 H102 LDA sing 335 n n 
C11 C12 LDA sing 336 n n 
C11 H111 LDA sing 337 n n 
C11 H112 LDA sing 338 n n 
C12 H121 LDA sing 339 n n 
C12 H122 LDA sing 340 n n 
C12 H123 LDA sing 341 n n 
#
_atom_sites.entry_id                     1AR1 
_atom_sites.fract_transf_matrix[1][1]    0.010695 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006623 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006382 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 5 CU A 1 559 5 CU CU . 
F 6 MG A 1 560 6 MG MG . 
G 7 CA A 1 561 7 CA CA . 
H 8 HEA A 1 562 1 HEA HEA . 
I 8 HEA A 1 563 2 HEA HEA . 
J 9 LDA A 1 564 10 LDA LDA . 
K 9 LDA A 1 565 11 LDA LDA . 
L 9 LDA A 1 566 12 LDA LDA . 
M 9 LDA A 1 567 14 LDA LDA . 
N 9 LDA A 1 568 15 LDA LDA . 
O 9 LDA A 1 569 18 LDA LDA . 
P 5 CU B 1 270 3 CU CU . 
Q 5 CU B 1 271 4 CU CU . 
R 9 LDA B 1 272 8 LDA LDA . 
S 9 LDA B 1 273 9 LDA LDA . 
T 9 LDA B 1 274 16 LDA LDA . 
U 10 HOH A 1 570 6 HOH HOH . 
U 10 HOH A 2 571 7 HOH HOH . 
U 10 HOH A 3 572 8 HOH HOH . 
U 10 HOH A 4 573 10 HOH HOH . 
U 10 HOH A 5 574 12 HOH HOH . 
U 10 HOH A 6 575 13 HOH HOH . 
U 10 HOH A 7 576 15 HOH HOH . 
U 10 HOH A 8 577 41 HOH HOH . 
U 10 HOH A 9 578 42 HOH HOH . 
U 10 HOH A 10 579 58 HOH HOH . 
U 10 HOH A 11 580 64 HOH HOH . 
U 10 HOH A 12 581 67 HOH HOH . 
U 10 HOH A 13 582 70 HOH HOH . 
U 10 HOH A 14 583 76 HOH HOH . 
U 10 HOH A 15 584 86 HOH HOH . 
U 10 HOH A 16 585 89 HOH HOH . 
U 10 HOH A 17 586 125 HOH HOH . 
U 10 HOH A 18 587 127 HOH HOH . 
U 10 HOH A 19 588 143 HOH HOH . 
U 10 HOH A 20 589 145 HOH HOH . 
U 10 HOH A 21 590 153 HOH HOH . 
V 10 HOH B 1 275 11 HOH HOH . 
V 10 HOH B 2 276 22 HOH HOH . 
V 10 HOH B 3 277 25 HOH HOH . 
V 10 HOH B 4 278 26 HOH HOH . 
V 10 HOH B 5 279 28 HOH HOH . 
V 10 HOH B 6 280 34 HOH HOH . 
V 10 HOH B 7 281 35 HOH HOH . 
V 10 HOH B 8 282 36 HOH HOH . 
V 10 HOH B 9 283 37 HOH HOH . 
V 10 HOH B 10 284 40 HOH HOH . 
V 10 HOH B 11 285 43 HOH HOH . 
V 10 HOH B 12 286 69 HOH HOH . 
V 10 HOH B 13 287 79 HOH HOH . 
V 10 HOH B 14 288 80 HOH HOH . 
V 10 HOH B 15 289 91 HOH HOH . 
V 10 HOH B 16 290 128 HOH HOH . 
V 10 HOH B 17 291 129 HOH HOH . 
V 10 HOH B 18 292 148 HOH HOH . 
V 10 HOH B 19 293 150 HOH HOH . 
V 10 HOH B 20 294 151 HOH HOH . 
V 10 HOH B 21 295 152 HOH HOH . 
W 10 HOH C 1 128 95 HOH HOH . 
W 10 HOH C 2 129 121 HOH HOH . 
W 10 HOH C 3 130 141 HOH HOH . 
W 10 HOH C 4 131 156 HOH HOH . 
W 10 HOH C 5 132 157 HOH HOH . 
X 10 HOH D 1 121 49 HOH HOH . 
X 10 HOH D 2 122 94 HOH HOH . 
X 10 HOH D 3 123 99 HOH HOH . 
X 10 HOH D 4 124 112 HOH HOH . 
X 10 HOH D 5 125 158 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 LDA . . . N 9 -24.61 -0.498 56.427 1 100 ? N1 LDA 568 A 1 
HETATM 2 O O1 LDA . . . N 9 -23.515 -1.141 56.347 1 100 ? O1 LDA 568 A 1 
HETATM 3 C CM1 LDA . . . N 9 -25.422 -0.679 55.211 1 100 ? CM1 LDA 568 A 1 
HETATM 4 C CM2 LDA . . . N 9 -25.421 -0.974 57.562 1 100 ? CM2 LDA 568 A 1 
HETATM 5 C C1 LDA . . . N 9 -24.342 0.945 56.599 1 98.92 ? C1 LDA 568 A 1 
HETATM 6 C C2 LDA . . . N 9 -24.941 2.31 56.97 1 92.54 ? C2 LDA 568 A 1 
HETATM 7 C C3 LDA . . . N 9 -24.024 3.44 56.481 1 90.53 ? C3 LDA 568 A 1 
HETATM 8 C C4 LDA . . . N 9 -22.56 3.125 56.799 1 87.34 ? C4 LDA 568 A 1 
HETATM 9 C C5 LDA . . . N 9 -21.553 3.964 56.01 1 83.8 ? C5 LDA 568 A 1 
HETATM 10 C C6 LDA . . . N 9 -21.51 5.405 56.47 1 84.3 ? C6 LDA 568 A 1 
HETATM 11 C C7 LDA . . . N 9 -20.149 6.005 56.169 1 88.72 ? C7 LDA 568 A 1 
HETATM 12 C C8 LDA . . . N 9 -20.021 7.432 56.687 1 90.88 ? C8 LDA 568 A 1 
HETATM 13 C C9 LDA . . . N 9 -20.931 8.407 55.949 1 92.73 ? C9 LDA 568 A 1 
HETATM 14 C C10 LDA . . . N 9 -20.407 9.827 56.114 1 94.89 ? C10 LDA 568 A 1 
HETATM 15 C C11 LDA . . . N 9 -21.203 10.837 55.299 1 96.22 ? C11 LDA 568 A 1 
HETATM 16 C C12 LDA . . . N 9 -20.537 12.209 55.362 1 93.9 ? C12 LDA 568 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           16 
#