data_1ARC # _model_server_result.job_id I3RWNSMIzZ8UkwNhYB1wQQ _model_server_result.datetime_utc '2024-11-24 12:56:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1arc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":270}' # _entry.id 1ARC # _exptl.entry_id 1ARC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 332.846 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(1S)-5-amino-1-(chloroacetyl)pentyl]-4-methylbenzenesulfonamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 120.1 _cell.angle_beta 112.8 _cell.angle_gamma 68.5 _cell.entry_id 1ARC _cell.length_a 37.3 _cell.length_b 42.8 _cell.length_c 48 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ARC _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 216 A CYS 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? disulf ? disulf2 A SG CYS 12 A CYS 12 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf3 A SG CYS 36 A CYS 36 1_555 A SG CYS 58 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? covale ? covale1 A NE2 HIS 57 A HIS 57 1_555 B CM TCK . A TCK 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? # _chem_comp.formula 'C14 H21 Cl N2 O3 S' _chem_comp.formula_weight 332.846 _chem_comp.id TCK _chem_comp.mon_nstd_flag . _chem_comp.name N-[(1S)-5-amino-1-(chloroacetyl)pentyl]-4-methylbenzenesulfonamide _chem_comp.type peptide-like _chem_comp.pdbx_synonyms Tos-Lys-CH2Cl # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1S TCK doub 290 n n S C1 TCK sing 291 n n O2S S TCK doub 292 n n C1 C2 TCK doub 293 n y C1 C6 TCK sing 294 n y C2 C3 TCK sing 295 n y C2 H2 TCK sing 296 n n C3 C4 TCK doub 297 n y C3 H3 TCK sing 298 n n C4 C5 TCK sing 299 n y C4 C7 TCK sing 300 n n C5 C6 TCK doub 301 n y C5 H5 TCK sing 302 n n C6 H6 TCK sing 303 n n C7 H1 TCK sing 304 n n C7 H2A TCK sing 305 n n C7 H3A TCK sing 306 n n N CA TCK sing 307 n n N H TCK sing 308 n n N S TCK sing 309 n n CA C TCK sing 310 n n CA CB TCK sing 311 n n CA HA TCK sing 312 n n C O TCK doub 313 n n C CM TCK sing 314 n n CB CG TCK sing 315 n n CB HB2 TCK sing 316 n n CB HB3 TCK sing 317 n n CG CD TCK sing 318 n n CG HG2 TCK sing 319 n n CG HG3 TCK sing 320 n n CD CE TCK sing 321 n n CD HD2 TCK sing 322 n n CD HD3 TCK sing 323 n n CE NZ TCK sing 324 n n CE HE2 TCK sing 325 n n CE HE3 TCK sing 326 n n NZ HZ1 TCK sing 327 n n NZ HZ2 TCK sing 328 n n CM HM1 TCK sing 329 n n CM HM2 TCK sing 330 n n CM CL1 TCK sing 331 n n # _atom_sites.entry_id 1ARC _atom_sites.fract_transf_matrix[1][1] 0.02681 _atom_sites.fract_transf_matrix[1][2] -0.010561 _atom_sites.fract_transf_matrix[1][3] 0.007538 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025112 _atom_sites.fract_transf_matrix[2][3] 0.011592 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024891 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TCK A 1 270 270 TCK TCK . C 3 HOH A 1 301 301 HOH HOH . C 3 HOH A 2 302 302 HOH HOH . C 3 HOH A 3 303 303 HOH HOH . C 3 HOH A 4 304 304 HOH HOH . C 3 HOH A 5 305 305 HOH HOH . C 3 HOH A 6 306 306 HOH HOH . C 3 HOH A 7 307 307 HOH HOH . C 3 HOH A 8 308 308 HOH HOH . C 3 HOH A 9 309 309 HOH HOH . C 3 HOH A 10 310 310 HOH HOH . C 3 HOH A 11 311 311 HOH HOH . C 3 HOH A 12 312 312 HOH HOH . C 3 HOH A 13 313 313 HOH HOH . C 3 HOH A 14 314 314 HOH HOH . C 3 HOH A 15 315 315 HOH HOH . C 3 HOH A 16 316 316 HOH HOH . C 3 HOH A 17 317 317 HOH HOH . C 3 HOH A 18 318 318 HOH HOH . C 3 HOH A 19 319 319 HOH HOH . C 3 HOH A 20 320 320 HOH HOH . C 3 HOH A 21 321 321 HOH HOH . C 3 HOH A 22 322 322 HOH HOH . C 3 HOH A 23 323 323 HOH HOH . C 3 HOH A 24 324 324 HOH HOH . C 3 HOH A 25 325 325 HOH HOH . C 3 HOH A 26 326 326 HOH HOH . C 3 HOH A 27 327 327 HOH HOH . C 3 HOH A 28 328 328 HOH HOH . C 3 HOH A 29 329 329 HOH HOH . C 3 HOH A 30 330 330 HOH HOH . C 3 HOH A 31 331 331 HOH HOH . C 3 HOH A 32 332 332 HOH HOH . C 3 HOH A 33 333 333 HOH HOH . C 3 HOH A 34 334 334 HOH HOH . C 3 HOH A 35 335 335 HOH HOH . C 3 HOH A 36 336 336 HOH HOH . C 3 HOH A 37 337 337 HOH HOH . C 3 HOH A 38 338 338 HOH HOH . C 3 HOH A 39 339 339 HOH HOH . C 3 HOH A 40 340 340 HOH HOH . C 3 HOH A 41 341 341 HOH HOH . C 3 HOH A 42 342 342 HOH HOH . C 3 HOH A 43 343 343 HOH HOH . C 3 HOH A 44 344 344 HOH HOH . C 3 HOH A 45 345 345 HOH HOH . C 3 HOH A 46 346 346 HOH HOH . C 3 HOH A 47 347 347 HOH HOH . C 3 HOH A 48 348 348 HOH HOH . C 3 HOH A 49 349 349 HOH HOH . C 3 HOH A 50 350 350 HOH HOH . C 3 HOH A 51 351 351 HOH HOH . C 3 HOH A 52 352 352 HOH HOH . C 3 HOH A 53 353 353 HOH HOH . C 3 HOH A 54 354 354 HOH HOH . C 3 HOH A 55 355 355 HOH HOH . C 3 HOH A 56 356 356 HOH HOH . C 3 HOH A 57 357 357 HOH HOH . C 3 HOH A 58 358 358 HOH HOH . C 3 HOH A 59 359 359 HOH HOH . C 3 HOH A 60 360 360 HOH HOH . C 3 HOH A 61 361 361 HOH HOH . C 3 HOH A 62 362 362 HOH HOH . C 3 HOH A 63 363 363 HOH HOH . C 3 HOH A 64 364 364 HOH HOH . C 3 HOH A 65 365 365 HOH HOH . C 3 HOH A 66 366 366 HOH HOH . C 3 HOH A 67 367 367 HOH HOH . C 3 HOH A 68 368 368 HOH HOH . C 3 HOH A 69 369 369 HOH HOH . C 3 HOH A 70 370 370 HOH HOH . C 3 HOH A 71 371 371 HOH HOH . C 3 HOH A 72 372 372 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S TCK . . . B 2 -2.346 -5.439 9.694 1 10.12 ? S TCK 270 A 1 HETATM 2 O O1S TCK . . . B 2 -2.464 -6.514 10.634 1 10.13 ? O1S TCK 270 A 1 HETATM 3 O O2S TCK . . . B 2 -1.42 -5.382 8.614 1 8.5 ? O2S TCK 270 A 1 HETATM 4 C C1 TCK . . . B 2 -2.284 -4.002 10.663 1 10.8 ? C1 TCK 270 A 1 HETATM 5 C C2 TCK . . . B 2 -1.757 -2.83 10.176 1 11.24 ? C2 TCK 270 A 1 HETATM 6 C C3 TCK . . . B 2 -1.812 -1.687 10.928 1 11.76 ? C3 TCK 270 A 1 HETATM 7 C C4 TCK . . . B 2 -2.337 -1.696 12.213 1 12.61 ? C4 TCK 270 A 1 HETATM 8 C C5 TCK . . . B 2 -2.961 -2.853 12.651 1 12.77 ? C5 TCK 270 A 1 HETATM 9 C C6 TCK . . . B 2 -2.804 -4.03 11.94 1 12.36 ? C6 TCK 270 A 1 HETATM 10 C C7 TCK . . . B 2 -2.166 -0.571 13.194 1 13.19 ? C7 TCK 270 A 1 HETATM 11 N N TCK . . . B 2 -3.847 -5.488 9.007 1 9.72 ? N TCK 270 A 1 HETATM 12 C CA TCK . . . B 2 -3.916 -5.612 7.525 1 11.24 ? CA TCK 270 A 1 HETATM 13 C C TCK . . . B 2 -4.86 -4.54 6.97 1 11.29 ? C TCK 270 A 1 HETATM 14 O O TCK . . . B 2 -4.719 -4.418 5.747 1 15.19 ? O TCK 270 A 1 HETATM 15 C CB TCK . . . B 2 -4.357 -7.01 7.095 1 12.32 ? CB TCK 270 A 1 HETATM 16 C CG TCK . . . B 2 -3.123 -7.954 7.035 1 12.39 ? CG TCK 270 A 1 HETATM 17 C CD TCK . . . B 2 -3.538 -9.42 6.802 1 13.28 ? CD TCK 270 A 1 HETATM 18 C CE TCK . . . B 2 -2.281 -10.317 6.701 1 13.4 ? CE TCK 270 A 1 HETATM 19 N NZ TCK . . . B 2 -2.637 -11.743 6.685 1 13.37 ? NZ TCK 270 A 1 HETATM 20 C CM TCK . . . B 2 -5.179 -3.414 7.884 1 8.53 ? CM TCK 270 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 375 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 20 #