data_1ATL # _model_server_result.job_id 1cQuWFAGWyv0LGyybzRxXA _model_server_result.datetime_utc '2024-10-18 16:23:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1atl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":404}' # _entry.id 1ATL # _exptl.entry_id 1ATL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1ATL _cell.length_a 97.32 _cell.length_b 97.32 _cell.length_c 87.76 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1ATL _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 117 A CYS 117 1_555 A SG CYS 197 A CYS 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf2 A SG CYS 157 A CYS 157 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 B SG CYS 117 B CYS 117 1_555 B SG CYS 197 B CYS 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? disulf ? disulf4 B SG CYS 157 B CYS 157 1_555 B SG CYS 164 B CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc1 A OE1 GLU 9 A GLU 9 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc2 A OD1 ASP 93 A ASP 93 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? metalc ? metalc3 A OD2 ASP 93 A ASP 93 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc4 A NE2 HIS 142 A HIS 142 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? metalc ? metalc5 A NE2 HIS 146 A HIS 146 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc6 A NE2 HIS 152 A HIS 152 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc7 A O CYS 197 A CYS 197 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc8 A OD1 ASN 200 A ASN 200 1_555 D CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc9 E O 0QI . A 0QI 301 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc10 E OXT 0QI . A 0QI 301 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc11 B OE1 GLU 9 B GLU 9 1_555 G CA CA . B CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? metalc ? metalc12 B OD1 ASP 93 B ASP 93 1_555 G CA CA . B CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.469 ? metalc ? metalc13 B OD2 ASP 93 B ASP 93 1_555 G CA CA . B CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.453 ? metalc ? metalc14 B NE2 HIS 142 B HIS 142 1_555 F ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc15 B NE2 HIS 146 B HIS 146 1_555 F ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc16 B NE2 HIS 152 B HIS 152 1_555 F ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? metalc ? metalc17 B O CYS 197 B CYS 197 1_555 G CA CA . B CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc18 B OD1 ASN 200 B ASN 200 1_555 G CA CA . B CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc19 H O 0QI . B 0QI 311 1_555 F ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc20 H OXT 0QI . B 0QI 311 1_555 F ZN ZN . B ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1ATL _atom_sites.fract_transf_matrix[1][1] 0.010275 _atom_sites.fract_transf_matrix[1][2] 0.005932 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011865 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011395 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 401 401 ZN ZN . D 3 CA A 1 403 403 CA CA . E 4 0QI A 1 301 301 0QI SLE . F 2 ZN B 1 402 402 ZN ZN . G 3 CA B 1 404 404 CA CA . H 4 0QI B 1 311 311 0QI SLE . I 5 HOH A 1 801 801 HOH HOH . I 5 HOH A 2 804 804 HOH HOH . I 5 HOH A 3 805 805 HOH HOH . I 5 HOH A 4 809 809 HOH HOH . I 5 HOH A 5 810 810 HOH HOH . I 5 HOH A 6 811 811 HOH HOH . I 5 HOH A 7 812 812 HOH HOH . I 5 HOH A 8 813 813 HOH HOH . I 5 HOH A 9 814 814 HOH HOH . I 5 HOH A 10 818 818 HOH HOH . I 5 HOH A 11 821 821 HOH HOH . I 5 HOH A 12 822 822 HOH HOH . I 5 HOH A 13 824 824 HOH HOH . I 5 HOH A 14 826 826 HOH HOH . I 5 HOH A 15 827 827 HOH HOH . I 5 HOH A 16 829 829 HOH HOH . I 5 HOH A 17 831 831 HOH HOH . I 5 HOH A 18 832 832 HOH HOH . I 5 HOH A 19 833 833 HOH HOH . I 5 HOH A 20 837 837 HOH HOH . I 5 HOH A 21 840 840 HOH HOH . I 5 HOH A 22 844 844 HOH HOH . I 5 HOH A 23 845 845 HOH HOH . I 5 HOH A 24 850 850 HOH HOH . I 5 HOH A 25 851 851 HOH HOH . I 5 HOH A 26 853 853 HOH HOH . I 5 HOH A 27 855 855 HOH HOH . I 5 HOH A 28 857 857 HOH HOH . I 5 HOH A 29 858 858 HOH HOH . I 5 HOH A 30 859 859 HOH HOH . I 5 HOH A 31 861 861 HOH HOH . I 5 HOH A 32 863 863 HOH HOH . I 5 HOH A 33 864 864 HOH HOH . I 5 HOH A 34 865 865 HOH HOH . I 5 HOH A 35 866 866 HOH HOH . I 5 HOH A 36 871 871 HOH HOH . I 5 HOH A 37 872 872 HOH HOH . I 5 HOH A 38 873 873 HOH HOH . I 5 HOH A 39 877 877 HOH HOH . I 5 HOH A 40 878 878 HOH HOH . I 5 HOH A 41 879 879 HOH HOH . I 5 HOH A 42 880 880 HOH HOH . I 5 HOH A 43 881 881 HOH HOH . I 5 HOH A 44 882 882 HOH HOH . I 5 HOH A 45 887 887 HOH HOH . I 5 HOH A 46 888 888 HOH HOH . I 5 HOH A 47 889 889 HOH HOH . I 5 HOH A 48 890 890 HOH HOH . I 5 HOH A 49 894 894 HOH HOH . I 5 HOH A 50 895 895 HOH HOH . I 5 HOH A 51 896 896 HOH HOH . I 5 HOH A 52 899 899 HOH HOH . I 5 HOH A 53 900 900 HOH HOH . I 5 HOH A 54 901 901 HOH HOH . I 5 HOH A 55 903 903 HOH HOH . I 5 HOH A 56 904 904 HOH HOH . I 5 HOH A 57 913 913 HOH HOH . I 5 HOH A 58 914 914 HOH HOH . I 5 HOH A 59 916 916 HOH HOH . I 5 HOH A 60 918 918 HOH HOH . I 5 HOH A 61 922 922 HOH HOH . I 5 HOH A 62 923 923 HOH HOH . I 5 HOH A 63 925 925 HOH HOH . I 5 HOH A 64 928 928 HOH HOH . I 5 HOH A 65 930 930 HOH HOH . I 5 HOH A 66 932 932 HOH HOH . I 5 HOH A 67 934 934 HOH HOH . I 5 HOH A 68 936 936 HOH HOH . I 5 HOH A 69 938 938 HOH HOH . I 5 HOH A 70 939 939 HOH HOH . I 5 HOH A 71 942 942 HOH HOH . I 5 HOH A 72 943 943 HOH HOH . I 5 HOH A 73 944 944 HOH HOH . I 5 HOH A 74 945 945 HOH HOH . I 5 HOH A 75 946 946 HOH HOH . I 5 HOH A 76 948 948 HOH HOH . I 5 HOH A 77 952 952 HOH HOH . I 5 HOH A 78 953 953 HOH HOH . I 5 HOH A 79 954 954 HOH HOH . I 5 HOH A 80 955 955 HOH HOH . J 5 HOH B 1 802 802 HOH HOH . J 5 HOH B 2 803 803 HOH HOH . J 5 HOH B 3 806 806 HOH HOH . J 5 HOH B 4 807 807 HOH HOH . J 5 HOH B 5 808 808 HOH HOH . J 5 HOH B 6 815 815 HOH HOH . J 5 HOH B 7 816 816 HOH HOH . J 5 HOH B 8 817 817 HOH HOH . J 5 HOH B 9 819 819 HOH HOH . J 5 HOH B 10 820 820 HOH HOH . J 5 HOH B 11 823 823 HOH HOH . J 5 HOH B 12 825 825 HOH HOH . J 5 HOH B 13 828 828 HOH HOH . J 5 HOH B 14 830 830 HOH HOH . J 5 HOH B 15 834 834 HOH HOH . J 5 HOH B 16 835 835 HOH HOH . J 5 HOH B 17 836 836 HOH HOH . J 5 HOH B 18 838 838 HOH HOH . J 5 HOH B 19 839 839 HOH HOH . J 5 HOH B 20 841 841 HOH HOH . J 5 HOH B 21 842 842 HOH HOH . J 5 HOH B 22 843 843 HOH HOH . J 5 HOH B 23 846 846 HOH HOH . J 5 HOH B 24 847 847 HOH HOH . J 5 HOH B 25 848 848 HOH HOH . J 5 HOH B 26 849 849 HOH HOH . J 5 HOH B 27 852 852 HOH HOH . J 5 HOH B 28 854 854 HOH HOH . J 5 HOH B 29 856 856 HOH HOH . J 5 HOH B 30 860 860 HOH HOH . J 5 HOH B 31 862 862 HOH HOH . J 5 HOH B 32 867 867 HOH HOH . J 5 HOH B 33 868 868 HOH HOH . J 5 HOH B 34 869 869 HOH HOH . J 5 HOH B 35 870 870 HOH HOH . J 5 HOH B 36 874 874 HOH HOH . J 5 HOH B 37 875 875 HOH HOH . J 5 HOH B 38 876 876 HOH HOH . J 5 HOH B 39 883 883 HOH HOH . J 5 HOH B 40 884 884 HOH HOH . J 5 HOH B 41 885 885 HOH HOH . J 5 HOH B 42 886 886 HOH HOH . J 5 HOH B 43 891 891 HOH HOH . J 5 HOH B 44 892 892 HOH HOH . J 5 HOH B 45 893 893 HOH HOH . J 5 HOH B 46 897 897 HOH HOH . J 5 HOH B 47 898 898 HOH HOH . J 5 HOH B 48 902 902 HOH HOH . J 5 HOH B 49 905 905 HOH HOH . J 5 HOH B 50 906 906 HOH HOH . J 5 HOH B 51 907 907 HOH HOH . J 5 HOH B 52 908 908 HOH HOH . J 5 HOH B 53 909 909 HOH HOH . J 5 HOH B 54 910 910 HOH HOH . J 5 HOH B 55 911 911 HOH HOH . J 5 HOH B 56 912 912 HOH HOH . J 5 HOH B 57 915 915 HOH HOH . J 5 HOH B 58 917 917 HOH HOH . J 5 HOH B 59 919 919 HOH HOH . J 5 HOH B 60 920 920 HOH HOH . J 5 HOH B 61 921 921 HOH HOH . J 5 HOH B 62 924 924 HOH HOH . J 5 HOH B 63 926 926 HOH HOH . J 5 HOH B 64 927 927 HOH HOH . J 5 HOH B 65 929 929 HOH HOH . J 5 HOH B 66 931 931 HOH HOH . J 5 HOH B 67 933 933 HOH HOH . J 5 HOH B 68 935 935 HOH HOH . J 5 HOH B 69 937 937 HOH HOH . J 5 HOH B 70 940 940 HOH HOH . J 5 HOH B 71 941 941 HOH HOH . J 5 HOH B 72 947 947 HOH HOH . J 5 HOH B 73 949 949 HOH HOH . J 5 HOH B 74 950 950 HOH HOH . J 5 HOH B 75 951 951 HOH HOH . J 5 HOH B 76 956 956 HOH HOH . J 5 HOH B 77 957 957 HOH HOH . J 5 HOH B 78 958 958 HOH HOH . J 5 HOH B 79 959 959 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 3 _atom_site.Cartn_x -5.388 _atom_site.Cartn_y 48.556 _atom_site.Cartn_z 35.956 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 13.26 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 404 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #