data_1AVR # _model_server_result.job_id LmJ_NJG_-6KzkLiKoqBaKw _model_server_result.datetime_utc '2024-11-24 12:19:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1avr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":322}' # _entry.id 1AVR # _exptl.entry_id 1AVR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1AVR _cell.length_a 99.7 _cell.length_b 99.7 _cell.length_c 96.35 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AVR _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O MET 28 A MET 28 1_555 D CA CA . A CA 323 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc2 A O GLY 30 A GLY 30 1_555 D CA CA . A CA 323 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc3 A O GLY 32 A GLY 32 1_555 D CA CA . A CA 323 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc4 A O THR 33 A THR 33 1_555 E CA CA . A CA 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc5 A OE1 GLU 35 A GLU 35 1_555 E CA CA . A CA 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? metalc ? metalc6 A OE2 GLU 35 A GLU 35 1_555 E CA CA . A CA 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.746 ? metalc ? metalc7 A O LYS 70 A LYS 70 1_555 F CA CA . A CA 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc8 A OE2 GLU 72 A GLU 72 1_555 D CA CA . A CA 323 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.501 ? metalc ? metalc9 A OE1 GLU 72 A GLU 72 1_555 D CA CA . A CA 323 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc10 A O LEU 73 A LEU 73 1_555 F CA CA . A CA 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc11 A OE1 GLU 78 A GLU 78 1_555 F CA CA . A CA 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.621 ? metalc ? metalc12 A O LEU 100 A LEU 100 1_555 B CA CA . A CA 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc13 A O GLY 102 A GLY 102 1_555 B CA CA . A CA 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc14 A O GLY 104 A GLY 104 1_555 B CA CA . A CA 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc15 A OD1 ASP 144 A ASP 144 1_555 B CA CA . A CA 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.995 ? metalc ? metalc16 A OD2 ASP 144 A ASP 144 1_555 B CA CA . A CA 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc17 A O MET 259 A MET 259 1_555 C CA CA . A CA 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc18 A O GLY 261 A GLY 261 1_555 C CA CA . A CA 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc19 A O GLY 263 A GLY 263 1_555 C CA CA . A CA 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc20 A OD1 ASP 303 A ASP 303 1_555 C CA CA . A CA 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.59 ? metalc ? metalc21 A OD2 ASP 303 A ASP 303 1_555 C CA CA . A CA 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.712 ? metalc ? metalc22 B CA CA . A CA 321 1_555 I O HOH . A HOH 478 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc23 B CA CA . A CA 321 1_555 I O HOH . A HOH 481 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc24 C CA CA . A CA 322 1_555 I O HOH . A HOH 483 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc25 D CA CA . A CA 323 1_555 I O HOH . A HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.966 ? metalc ? metalc26 D CA CA . A CA 323 1_555 I O HOH . A HOH 706 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc27 E CA CA . A CA 324 1_555 I O HOH . A HOH 498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? metalc ? metalc28 E CA CA . A CA 324 1_555 I O HOH . A HOH 499 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? metalc ? metalc29 E CA CA . A CA 324 1_555 I O HOH . A HOH 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.586 ? metalc ? metalc30 F CA CA . A CA 325 1_555 I O HOH . A HOH 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.197 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1AVR _atom_sites.fract_transf_matrix[1][1] 0.01003 _atom_sites.fract_transf_matrix[1][2] 0.005791 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011582 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010379 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 321 321 CA CA . C 2 CA A 1 322 322 CA CA . D 2 CA A 1 323 323 CA CA . E 2 CA A 1 324 324 CA CA . F 2 CA A 1 325 325 CA CA . G 3 SO4 A 1 550 550 SO4 SO4 . H 3 SO4 A 1 551 551 SO4 SO4 . I 4 HOH A 1 402 402 HOH HOH . I 4 HOH A 2 403 403 HOH HOH . I 4 HOH A 3 404 404 HOH HOH . I 4 HOH A 4 405 405 HOH HOH . I 4 HOH A 5 406 406 HOH HOH . I 4 HOH A 6 408 408 HOH HOH . I 4 HOH A 7 409 409 HOH HOH . I 4 HOH A 8 410 410 HOH HOH . I 4 HOH A 9 411 411 HOH HOH . I 4 HOH A 10 412 412 HOH HOH . I 4 HOH A 11 413 413 HOH HOH . I 4 HOH A 12 414 414 HOH HOH . I 4 HOH A 13 415 415 HOH HOH . I 4 HOH A 14 416 416 HOH HOH . I 4 HOH A 15 417 417 HOH HOH . I 4 HOH A 16 418 418 HOH HOH . I 4 HOH A 17 419 419 HOH HOH . I 4 HOH A 18 420 420 HOH HOH . I 4 HOH A 19 421 421 HOH HOH . I 4 HOH A 20 422 422 HOH HOH . I 4 HOH A 21 423 423 HOH HOH . I 4 HOH A 22 424 424 HOH HOH . I 4 HOH A 23 425 425 HOH HOH . I 4 HOH A 24 426 426 HOH HOH . I 4 HOH A 25 427 427 HOH HOH . I 4 HOH A 26 428 428 HOH HOH . I 4 HOH A 27 430 430 HOH HOH . I 4 HOH A 28 431 431 HOH HOH . I 4 HOH A 29 432 432 HOH HOH . I 4 HOH A 30 433 433 HOH HOH . I 4 HOH A 31 434 434 HOH HOH . I 4 HOH A 32 435 435 HOH HOH . I 4 HOH A 33 436 436 HOH HOH . I 4 HOH A 34 437 437 HOH HOH . I 4 HOH A 35 438 438 HOH HOH . I 4 HOH A 36 439 439 HOH HOH . I 4 HOH A 37 440 440 HOH HOH . I 4 HOH A 38 441 441 HOH HOH . I 4 HOH A 39 442 442 HOH HOH . I 4 HOH A 40 443 443 HOH HOH . I 4 HOH A 41 444 444 HOH HOH . I 4 HOH A 42 445 445 HOH HOH . I 4 HOH A 43 446 446 HOH HOH . I 4 HOH A 44 447 447 HOH HOH . I 4 HOH A 45 448 448 HOH HOH . I 4 HOH A 46 449 449 HOH HOH . I 4 HOH A 47 450 450 HOH HOH . I 4 HOH A 48 451 451 HOH HOH . I 4 HOH A 49 452 452 HOH HOH . I 4 HOH A 50 454 454 HOH HOH . I 4 HOH A 51 456 456 HOH HOH . I 4 HOH A 52 457 457 HOH HOH . I 4 HOH A 53 458 458 HOH HOH . I 4 HOH A 54 459 459 HOH HOH . I 4 HOH A 55 460 460 HOH HOH . I 4 HOH A 56 461 461 HOH HOH . I 4 HOH A 57 462 462 HOH HOH . I 4 HOH A 58 464 464 HOH HOH . I 4 HOH A 59 465 465 HOH HOH . I 4 HOH A 60 466 466 HOH HOH . I 4 HOH A 61 467 467 HOH HOH . I 4 HOH A 62 468 468 HOH HOH . I 4 HOH A 63 469 469 HOH HOH . I 4 HOH A 64 470 470 HOH HOH . I 4 HOH A 65 472 472 HOH HOH . I 4 HOH A 66 477 477 HOH HOH . I 4 HOH A 67 478 478 HOH HOH . I 4 HOH A 68 479 479 HOH HOH . I 4 HOH A 69 480 480 HOH HOH . I 4 HOH A 70 481 481 HOH HOH . I 4 HOH A 71 482 482 HOH HOH . I 4 HOH A 72 483 483 HOH HOH . I 4 HOH A 73 484 484 HOH HOH . I 4 HOH A 74 485 485 HOH HOH . I 4 HOH A 75 486 486 HOH HOH . I 4 HOH A 76 487 487 HOH HOH . I 4 HOH A 77 488 488 HOH HOH . I 4 HOH A 78 489 489 HOH HOH . I 4 HOH A 79 491 491 HOH HOH . I 4 HOH A 80 492 492 HOH HOH . I 4 HOH A 81 493 493 HOH HOH . I 4 HOH A 82 494 494 HOH HOH . I 4 HOH A 83 495 495 HOH HOH . I 4 HOH A 84 496 496 HOH HOH . I 4 HOH A 85 497 497 HOH HOH . I 4 HOH A 86 498 498 HOH HOH . I 4 HOH A 87 499 499 HOH HOH . I 4 HOH A 88 500 500 HOH HOH . I 4 HOH A 89 501 501 HOH HOH . I 4 HOH A 90 502 502 HOH HOH . I 4 HOH A 91 503 503 HOH HOH . I 4 HOH A 92 504 504 HOH HOH . I 4 HOH A 93 505 505 HOH HOH . I 4 HOH A 94 506 506 HOH HOH . I 4 HOH A 95 507 507 HOH HOH . I 4 HOH A 96 508 508 HOH HOH . I 4 HOH A 97 509 509 HOH HOH . I 4 HOH A 98 510 510 HOH HOH . I 4 HOH A 99 511 511 HOH HOH . I 4 HOH A 100 512 512 HOH HOH . I 4 HOH A 101 513 513 HOH HOH . I 4 HOH A 102 514 514 HOH HOH . I 4 HOH A 103 515 515 HOH HOH . I 4 HOH A 104 516 516 HOH HOH . I 4 HOH A 105 517 517 HOH HOH . I 4 HOH A 106 518 518 HOH HOH . I 4 HOH A 107 601 601 HOH HOH . I 4 HOH A 108 602 602 HOH HOH . I 4 HOH A 109 603 603 HOH HOH . I 4 HOH A 110 604 604 HOH HOH . I 4 HOH A 111 605 605 HOH HOH . I 4 HOH A 112 606 606 HOH HOH . I 4 HOH A 113 607 607 HOH HOH . I 4 HOH A 114 608 608 HOH HOH . I 4 HOH A 115 609 609 HOH HOH . I 4 HOH A 116 610 610 HOH HOH . I 4 HOH A 117 611 611 HOH HOH . I 4 HOH A 118 612 612 HOH HOH . I 4 HOH A 119 613 613 HOH HOH . I 4 HOH A 120 614 614 HOH HOH . I 4 HOH A 121 615 615 HOH HOH . I 4 HOH A 122 616 616 HOH HOH . I 4 HOH A 123 617 617 HOH HOH . I 4 HOH A 124 618 618 HOH HOH . I 4 HOH A 125 619 619 HOH HOH . I 4 HOH A 126 620 620 HOH HOH . I 4 HOH A 127 621 621 HOH HOH . I 4 HOH A 128 622 622 HOH HOH . I 4 HOH A 129 624 624 HOH HOH . I 4 HOH A 130 625 625 HOH HOH . I 4 HOH A 131 626 626 HOH HOH . I 4 HOH A 132 627 627 HOH HOH . I 4 HOH A 133 629 629 HOH HOH . I 4 HOH A 134 631 631 HOH HOH . I 4 HOH A 135 633 633 HOH HOH . I 4 HOH A 136 635 635 HOH HOH . I 4 HOH A 137 636 636 HOH HOH . I 4 HOH A 138 637 637 HOH HOH . I 4 HOH A 139 638 638 HOH HOH . I 4 HOH A 140 639 639 HOH HOH . I 4 HOH A 141 640 640 HOH HOH . I 4 HOH A 142 642 642 HOH HOH . I 4 HOH A 143 643 643 HOH HOH . I 4 HOH A 144 644 644 HOH HOH . I 4 HOH A 145 646 646 HOH HOH . I 4 HOH A 146 647 647 HOH HOH . I 4 HOH A 147 649 649 HOH HOH . I 4 HOH A 148 650 650 HOH HOH . I 4 HOH A 149 652 652 HOH HOH . I 4 HOH A 150 653 653 HOH HOH . I 4 HOH A 151 655 655 HOH HOH . I 4 HOH A 152 656 656 HOH HOH . I 4 HOH A 153 657 657 HOH HOH . I 4 HOH A 154 658 658 HOH HOH . I 4 HOH A 155 660 660 HOH HOH . I 4 HOH A 156 661 661 HOH HOH . I 4 HOH A 157 662 662 HOH HOH . I 4 HOH A 158 663 663 HOH HOH . I 4 HOH A 159 664 664 HOH HOH . I 4 HOH A 160 665 665 HOH HOH . I 4 HOH A 161 666 666 HOH HOH . I 4 HOH A 162 667 667 HOH HOH . I 4 HOH A 163 668 668 HOH HOH . I 4 HOH A 164 669 669 HOH HOH . I 4 HOH A 165 670 670 HOH HOH . I 4 HOH A 166 671 671 HOH HOH . I 4 HOH A 167 672 672 HOH HOH . I 4 HOH A 168 673 673 HOH HOH . I 4 HOH A 169 674 674 HOH HOH . I 4 HOH A 170 675 675 HOH HOH . I 4 HOH A 171 676 676 HOH HOH . I 4 HOH A 172 677 677 HOH HOH . I 4 HOH A 173 678 678 HOH HOH . I 4 HOH A 174 679 679 HOH HOH . I 4 HOH A 175 680 680 HOH HOH . I 4 HOH A 176 681 681 HOH HOH . I 4 HOH A 177 682 682 HOH HOH . I 4 HOH A 178 683 683 HOH HOH . I 4 HOH A 179 700 700 HOH HOH . I 4 HOH A 180 701 701 HOH HOH . I 4 HOH A 181 702 702 HOH HOH . I 4 HOH A 182 703 703 HOH HOH . I 4 HOH A 183 704 704 HOH HOH . I 4 HOH A 184 705 705 HOH HOH . I 4 HOH A 185 706 706 HOH HOH . I 4 HOH A 186 707 707 HOH HOH . I 4 HOH A 187 708 708 HOH HOH . I 4 HOH A 188 709 709 HOH HOH . I 4 HOH A 189 710 710 HOH HOH . I 4 HOH A 190 711 711 HOH HOH . I 4 HOH A 191 712 712 HOH HOH . I 4 HOH A 192 713 713 HOH HOH . I 4 HOH A 193 714 714 HOH HOH . I 4 HOH A 194 715 715 HOH HOH . I 4 HOH A 195 716 716 HOH HOH . I 4 HOH A 196 717 717 HOH HOH . I 4 HOH A 197 718 718 HOH HOH . I 4 HOH A 198 719 719 HOH HOH . I 4 HOH A 199 720 720 HOH HOH . I 4 HOH A 200 721 721 HOH HOH . I 4 HOH A 201 722 722 HOH HOH . I 4 HOH A 202 723 723 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -27.573 _atom_site.Cartn_y 34.287 _atom_site.Cartn_z -10.481 _atom_site.occupancy 0.75 _atom_site.B_iso_or_equiv 20.21 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 322 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #