data_1AVS # _model_server_result.job_id o1qFr-VglvBACP3xwgcReQ _model_server_result.datetime_utc '2024-10-24 04:23:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1avs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":94}' # _entry.id 1AVS # _exptl.entry_id 1AVS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.67 _cell.angle_gamma 90 _cell.entry_id 1AVS _cell.length_a 32.12 _cell.length_b 81.58 _cell.length_c 39.86 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AVS _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 30 A ASP 30 1_555 C CA CA . A CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc2 A OD1 ASP 32 A ASP 32 1_555 C CA CA . A CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc3 A O ASP 36 A ASP 36 1_555 C CA CA . A CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc4 A OE2 GLU 41 A GLU 41 1_555 C CA CA . A CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.595 ? metalc ? metalc5 A OE1 GLU 41 A GLU 41 1_555 C CA CA . A CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? metalc ? metalc6 A OD1 ASP 66 A ASP 66 1_555 D CA CA . A CA 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc7 A OD1 ASP 68 A ASP 68 1_555 D CA CA . A CA 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc8 A OG SER 70 A SER 70 1_555 D CA CA . A CA 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.59 ? metalc ? metalc9 A O THR 72 A THR 72 1_555 D CA CA . A CA 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? metalc ? metalc10 A OE1 GLU 77 A GLU 77 1_555 D CA CA . A CA 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc11 A OE2 GLU 77 A GLU 77 1_555 D CA CA . A CA 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc12 C CA CA . A CA 93 1_555 G O HOH . A HOH 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc13 C CA CA . A CA 93 1_555 G O HOH . A HOH 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc14 D CA CA . A CA 94 1_555 G O HOH . A HOH 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc15 B OD1 ASP 30 B ASP 30 1_555 E CA CA . B CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc16 B OD1 ASP 32 B ASP 32 1_555 E CA CA . B CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc17 B O ASP 36 B ASP 36 1_555 E CA CA . B CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc18 B OE2 GLU 41 B GLU 41 1_555 E CA CA . B CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc19 B OE1 GLU 41 B GLU 41 1_555 E CA CA . B CA 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? metalc ? metalc20 B OD1 ASP 66 B ASP 66 1_555 F CA CA . B CA 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc21 B OD1 ASP 68 B ASP 68 1_555 F CA CA . B CA 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc22 B OG SER 70 B SER 70 1_555 F CA CA . B CA 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? metalc ? metalc23 B O THR 72 B THR 72 1_555 F CA CA . B CA 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? metalc ? metalc24 B OE1 GLU 77 B GLU 77 1_555 F CA CA . B CA 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc25 B OE2 GLU 77 B GLU 77 1_555 F CA CA . B CA 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? metalc ? metalc26 E CA CA . B CA 93 1_555 H O HOH . B HOH 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? metalc ? metalc27 E CA CA . B CA 93 1_555 H O HOH . B HOH 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc28 F CA CA . B CA 94 1_555 H O HOH . B HOH 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1AVS _atom_sites.fract_transf_matrix[1][1] 0.031133 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.013004 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012258 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.027188 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 93 93 CA CA . D 2 CA A 1 94 94 CA CA . E 2 CA B 1 93 93 CA CA . F 2 CA B 1 94 94 CA CA . G 3 HOH A 1 95 95 HOH HOH . G 3 HOH A 2 96 96 HOH HOH . G 3 HOH A 3 97 97 HOH HOH . G 3 HOH A 4 98 98 HOH HOH . G 3 HOH A 5 99 99 HOH HOH . G 3 HOH A 6 100 100 HOH HOH . G 3 HOH A 7 101 101 HOH HOH . G 3 HOH A 8 102 102 HOH HOH . G 3 HOH A 9 103 103 HOH HOH . G 3 HOH A 10 104 105 HOH HOH . G 3 HOH A 11 105 106 HOH HOH . G 3 HOH A 12 106 107 HOH HOH . G 3 HOH A 13 108 111 HOH HOH . G 3 HOH A 14 109 112 HOH HOH . G 3 HOH A 15 110 114 HOH HOH . G 3 HOH A 16 111 120 HOH HOH . G 3 HOH A 17 112 121 HOH HOH . G 3 HOH A 18 124 106 HOH HOH . G 3 HOH A 19 125 107 HOH HOH . G 3 HOH A 20 126 108 HOH HOH . G 3 HOH A 21 127 109 HOH HOH . G 3 HOH A 22 128 110 HOH HOH . G 3 HOH A 23 129 111 HOH HOH . G 3 HOH A 24 130 112 HOH HOH . G 3 HOH A 25 131 113 HOH HOH . G 3 HOH A 26 132 114 HOH HOH . G 3 HOH A 27 133 115 HOH HOH . G 3 HOH A 28 134 248 HOH HOH . G 3 HOH A 29 143 260 HOH HOH . G 3 HOH A 30 154 280 HOH HOH . G 3 HOH A 31 155 281 HOH HOH . G 3 HOH A 32 157 286 HOH HOH . G 3 HOH A 33 158 289 HOH HOH . G 3 HOH A 34 159 290 HOH HOH . G 3 HOH A 35 160 292 HOH HOH . G 3 HOH A 36 161 293 HOH HOH . G 3 HOH A 37 162 295 HOH HOH . G 3 HOH A 38 169 306 HOH HOH . G 3 HOH A 39 170 307 HOH HOH . G 3 HOH A 40 171 308 HOH HOH . G 3 HOH A 41 172 310 HOH HOH . G 3 HOH A 42 173 311 HOH HOH . G 3 HOH A 43 174 312 HOH HOH . G 3 HOH A 44 175 313 HOH HOH . G 3 HOH A 45 176 314 HOH HOH . G 3 HOH A 46 180 322 HOH HOH . G 3 HOH A 47 181 325 HOH HOH . G 3 HOH A 48 182 326 HOH HOH . G 3 HOH A 49 183 327 HOH HOH . G 3 HOH A 50 184 329 HOH HOH . G 3 HOH A 51 185 331 HOH HOH . G 3 HOH A 52 186 332 HOH HOH . H 3 HOH B 1 107 109 HOH HOH . H 3 HOH B 2 113 95 HOH HOH . H 3 HOH B 3 114 96 HOH HOH . H 3 HOH B 4 115 97 HOH HOH . H 3 HOH B 5 116 98 HOH HOH . H 3 HOH B 6 117 99 HOH HOH . H 3 HOH B 7 118 100 HOH HOH . H 3 HOH B 8 119 101 HOH HOH . H 3 HOH B 9 120 102 HOH HOH . H 3 HOH B 10 121 103 HOH HOH . H 3 HOH B 11 122 104 HOH HOH . H 3 HOH B 12 123 105 HOH HOH . H 3 HOH B 13 135 249 HOH HOH . H 3 HOH B 14 136 250 HOH HOH . H 3 HOH B 15 137 251 HOH HOH . H 3 HOH B 16 138 254 HOH HOH . H 3 HOH B 17 139 255 HOH HOH . H 3 HOH B 18 140 257 HOH HOH . H 3 HOH B 19 141 258 HOH HOH . H 3 HOH B 20 142 259 HOH HOH . H 3 HOH B 21 144 262 HOH HOH . H 3 HOH B 22 145 263 HOH HOH . H 3 HOH B 23 146 264 HOH HOH . H 3 HOH B 24 147 265 HOH HOH . H 3 HOH B 25 148 266 HOH HOH . H 3 HOH B 26 149 267 HOH HOH . H 3 HOH B 27 150 268 HOH HOH . H 3 HOH B 28 151 277 HOH HOH . H 3 HOH B 29 152 278 HOH HOH . H 3 HOH B 30 153 279 HOH HOH . H 3 HOH B 31 156 284 HOH HOH . H 3 HOH B 32 163 297 HOH HOH . H 3 HOH B 33 164 300 HOH HOH . H 3 HOH B 34 165 301 HOH HOH . H 3 HOH B 35 166 302 HOH HOH . H 3 HOH B 36 167 303 HOH HOH . H 3 HOH B 37 168 305 HOH HOH . H 3 HOH B 38 177 315 HOH HOH . H 3 HOH B 39 178 316 HOH HOH . H 3 HOH B 40 179 319 HOH HOH . H 3 HOH B 41 187 335 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x -1.438 _atom_site.Cartn_y 31.58 _atom_site.Cartn_z 31.854 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 18.06 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 94 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #