data_1AW9 # _model_server_result.job_id KhJpQ50gX4uMc0Idn8gSqw _model_server_result.datetime_utc '2024-11-26 03:47:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1aw9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":226}' # _entry.id 1AW9 # _exptl.entry_id 1AW9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 112.411 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CADMIUM ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1AW9 _cell.length_a 97.77 _cell.length_b 97.77 _cell.length_c 116.45 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AW9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 97.77 0 0 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 48.885 84.671304 0 4 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/2 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 48.885 84.671304 58.225 5 'crystal symmetry operation' 11_655 -x+y+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 97.77 0 58.225 6 'crystal symmetry operation' 12_555 x,x-y,-z+1/2 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 58.225 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 27 A ASP 28 1_555 F CD CD . A CD 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? metalc ? metalc2 A OD2 ASP 27 A ASP 28 10_775 F CD CD . A CD 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.015 ? metalc ? metalc3 A OE1 GLU 66 A GLU 67 12_555 E CD CD . A CD 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? metalc ? metalc4 A OE2 GLU 66 A GLU 67 12_555 E CD CD . A CD 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc5 A OD1 ASP 133 A ASP 134 3_665 D CD CD . A CD 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc6 A OD2 ASP 133 A ASP 134 3_665 D CD CD . A CD 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.636 ? metalc ? metalc7 A OE2 GLU 137 A GLU 138 1_555 D CD CD . A CD 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? metalc ? metalc8 A OE1 GLU 137 A GLU 138 1_555 D CD CD . A CD 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? metalc ? metalc9 A ND1 HIS 149 A HIS 150 1_555 B CD CD . A CD 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc10 B CD CD . A CD 219 1_555 G O HOH . A HOH 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.921 ? metalc ? metalc11 B CD CD . A CD 219 1_555 G O HOH . A HOH 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.909 ? metalc ? metalc12 B CD CD . A CD 219 1_555 G O HOH . A HOH 385 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.817 ? metalc ? metalc13 D CD CD . A CD 222 1_555 G O HOH . A HOH 332 3_665 ? ? ? ? ? ? ? ? ? ? ? ? 1.878 ? # _chem_comp.formula 'Cd 2' _chem_comp.formula_weight 112.411 _chem_comp.id CD _chem_comp.mon_nstd_flag . _chem_comp.name 'CADMIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1AW9 _atom_sites.fract_transf_matrix[1][1] 0.010228 _atom_sites.fract_transf_matrix[1][2] 0.005905 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01181 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008587 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CD A 1 219 219 CD CD . C 2 CD A 1 220 220 CD CD . D 2 CD A 1 222 222 CD CD . E 2 CD A 1 226 226 CD CD . F 2 CD A 1 376 376 CD CD . G 3 HOH A 1 224 224 HOH HOH . G 3 HOH A 2 225 225 HOH HOH . G 3 HOH A 3 227 227 HOH HOH . G 3 HOH A 4 228 228 HOH HOH . G 3 HOH A 5 229 229 HOH HOH . G 3 HOH A 6 230 230 HOH HOH . G 3 HOH A 7 231 231 HOH HOH . G 3 HOH A 8 232 232 HOH HOH . G 3 HOH A 9 233 233 HOH HOH . G 3 HOH A 10 234 234 HOH HOH . G 3 HOH A 11 235 235 HOH HOH . G 3 HOH A 12 236 236 HOH HOH . G 3 HOH A 13 237 237 HOH HOH . G 3 HOH A 14 238 238 HOH HOH . G 3 HOH A 15 239 239 HOH HOH . G 3 HOH A 16 240 240 HOH HOH . G 3 HOH A 17 241 241 HOH HOH . G 3 HOH A 18 242 242 HOH HOH . G 3 HOH A 19 243 243 HOH HOH . G 3 HOH A 20 244 244 HOH HOH . G 3 HOH A 21 245 245 HOH HOH . G 3 HOH A 22 246 246 HOH HOH . G 3 HOH A 23 247 247 HOH HOH . G 3 HOH A 24 248 248 HOH HOH . G 3 HOH A 25 249 249 HOH HOH . G 3 HOH A 26 250 250 HOH HOH . G 3 HOH A 27 251 251 HOH HOH . G 3 HOH A 28 252 252 HOH HOH . G 3 HOH A 29 253 253 HOH HOH . G 3 HOH A 30 254 254 HOH HOH . G 3 HOH A 31 255 255 HOH HOH . G 3 HOH A 32 256 256 HOH HOH . G 3 HOH A 33 257 257 HOH HOH . G 3 HOH A 34 258 258 HOH HOH . G 3 HOH A 35 259 259 HOH HOH . G 3 HOH A 36 260 260 HOH HOH . G 3 HOH A 37 261 261 HOH HOH . G 3 HOH A 38 262 262 HOH HOH . G 3 HOH A 39 263 263 HOH HOH . G 3 HOH A 40 264 264 HOH HOH . G 3 HOH A 41 265 265 HOH HOH . G 3 HOH A 42 266 266 HOH HOH . G 3 HOH A 43 267 267 HOH HOH . G 3 HOH A 44 268 268 HOH HOH . G 3 HOH A 45 269 269 HOH HOH . G 3 HOH A 46 270 270 HOH HOH . G 3 HOH A 47 271 271 HOH HOH . G 3 HOH A 48 272 272 HOH HOH . G 3 HOH A 49 273 273 HOH HOH . G 3 HOH A 50 274 274 HOH HOH . G 3 HOH A 51 275 275 HOH HOH . G 3 HOH A 52 276 276 HOH HOH . G 3 HOH A 53 277 277 HOH HOH . G 3 HOH A 54 278 278 HOH HOH . G 3 HOH A 55 279 279 HOH HOH . G 3 HOH A 56 280 280 HOH HOH . G 3 HOH A 57 281 281 HOH HOH . G 3 HOH A 58 282 282 HOH HOH . G 3 HOH A 59 283 283 HOH HOH . G 3 HOH A 60 284 284 HOH HOH . G 3 HOH A 61 285 285 HOH HOH . G 3 HOH A 62 286 286 HOH HOH . G 3 HOH A 63 287 287 HOH HOH . G 3 HOH A 64 288 288 HOH HOH . G 3 HOH A 65 289 289 HOH HOH . G 3 HOH A 66 290 290 HOH HOH . G 3 HOH A 67 291 291 HOH HOH . G 3 HOH A 68 292 292 HOH HOH . G 3 HOH A 69 293 293 HOH HOH . G 3 HOH A 70 294 294 HOH HOH . G 3 HOH A 71 295 295 HOH HOH . G 3 HOH A 72 297 297 HOH HOH . G 3 HOH A 73 298 298 HOH HOH . G 3 HOH A 74 299 299 HOH HOH . G 3 HOH A 75 300 300 HOH HOH . G 3 HOH A 76 301 301 HOH HOH . G 3 HOH A 77 302 302 HOH HOH . G 3 HOH A 78 303 303 HOH HOH . G 3 HOH A 79 304 304 HOH HOH . G 3 HOH A 80 305 305 HOH HOH . G 3 HOH A 81 306 306 HOH HOH . G 3 HOH A 82 309 309 HOH HOH . G 3 HOH A 83 310 310 HOH HOH . G 3 HOH A 84 311 311 HOH HOH . G 3 HOH A 85 312 312 HOH HOH . G 3 HOH A 86 313 313 HOH HOH . G 3 HOH A 87 314 314 HOH HOH . G 3 HOH A 88 315 315 HOH HOH . G 3 HOH A 89 316 316 HOH HOH . G 3 HOH A 90 317 317 HOH HOH . G 3 HOH A 91 318 318 HOH HOH . G 3 HOH A 92 319 319 HOH HOH . G 3 HOH A 93 320 320 HOH HOH . G 3 HOH A 94 321 321 HOH HOH . G 3 HOH A 95 322 322 HOH HOH . G 3 HOH A 96 323 323 HOH HOH . G 3 HOH A 97 324 324 HOH HOH . G 3 HOH A 98 325 325 HOH HOH . G 3 HOH A 99 326 326 HOH HOH . G 3 HOH A 100 327 327 HOH HOH . G 3 HOH A 101 328 328 HOH HOH . G 3 HOH A 102 329 329 HOH HOH . G 3 HOH A 103 330 330 HOH HOH . G 3 HOH A 104 331 331 HOH HOH . G 3 HOH A 105 332 332 HOH HOH . G 3 HOH A 106 333 333 HOH HOH . G 3 HOH A 107 334 334 HOH HOH . G 3 HOH A 108 335 335 HOH HOH . G 3 HOH A 109 336 336 HOH HOH . G 3 HOH A 110 337 337 HOH HOH . G 3 HOH A 111 338 338 HOH HOH . G 3 HOH A 112 339 339 HOH HOH . G 3 HOH A 113 340 340 HOH HOH . G 3 HOH A 114 341 341 HOH HOH . G 3 HOH A 115 342 342 HOH HOH . G 3 HOH A 116 343 343 HOH HOH . G 3 HOH A 117 344 344 HOH HOH . G 3 HOH A 118 345 345 HOH HOH . G 3 HOH A 119 346 346 HOH HOH . G 3 HOH A 120 347 347 HOH HOH . G 3 HOH A 121 348 348 HOH HOH . G 3 HOH A 122 349 349 HOH HOH . G 3 HOH A 123 350 350 HOH HOH . G 3 HOH A 124 351 351 HOH HOH . G 3 HOH A 125 353 353 HOH HOH . G 3 HOH A 126 354 354 HOH HOH . G 3 HOH A 127 355 355 HOH HOH . G 3 HOH A 128 356 356 HOH HOH . G 3 HOH A 129 357 357 HOH HOH . G 3 HOH A 130 358 358 HOH HOH . G 3 HOH A 131 359 359 HOH HOH . G 3 HOH A 132 360 360 HOH HOH . G 3 HOH A 133 361 361 HOH HOH . G 3 HOH A 134 362 362 HOH HOH . G 3 HOH A 135 363 363 HOH HOH . G 3 HOH A 136 365 365 HOH HOH . G 3 HOH A 137 366 366 HOH HOH . G 3 HOH A 138 367 367 HOH HOH . G 3 HOH A 139 368 368 HOH HOH . G 3 HOH A 140 369 369 HOH HOH . G 3 HOH A 141 370 370 HOH HOH . G 3 HOH A 142 372 372 HOH HOH . G 3 HOH A 143 373 373 HOH HOH . G 3 HOH A 144 374 374 HOH HOH . G 3 HOH A 145 375 375 HOH HOH . G 3 HOH A 146 377 377 HOH HOH . G 3 HOH A 147 378 378 HOH HOH . G 3 HOH A 148 379 379 HOH HOH . G 3 HOH A 149 380 380 HOH HOH . G 3 HOH A 150 381 381 HOH HOH . G 3 HOH A 151 382 382 HOH HOH . G 3 HOH A 152 383 383 HOH HOH . G 3 HOH A 153 384 384 HOH HOH . G 3 HOH A 154 385 385 HOH HOH . G 3 HOH A 155 386 386 HOH HOH . G 3 HOH A 156 387 387 HOH HOH . G 3 HOH A 157 388 388 HOH HOH . G 3 HOH A 158 389 389 HOH HOH . G 3 HOH A 159 390 390 HOH HOH . G 3 HOH A 160 391 391 HOH HOH . G 3 HOH A 161 393 393 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CD _atom_site.label_atom_id CD _atom_site.label_comp_id CD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x 70.169 _atom_site.Cartn_y 33.247 _atom_site.Cartn_z 34.748 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 46.75 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CD _atom_site.auth_comp_id CD _atom_site.auth_seq_id 226 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 245 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #