data_1AYU # _model_server_result.job_id IKjsWMMjvB6zPwkIO09g1Q _model_server_result.datetime_utc '2025-02-22 21:07:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ayu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":300}' # _entry.id 1AYU # _exptl.entry_id 1AYU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 584.664 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,5-BIS(N-BENZYLOXYCARBONYL-L-LEUCINYL)CARBOHYDRAZIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1AYU _cell.length_a 38.33 _cell.length_b 51.3 _cell.length_c 103.86 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AYU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 63 A CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 A SG CYS 56 A CYS 56 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 A SG CYS 155 A CYS 155 1_555 A SG CYS 204 A CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? covale ? covale1 A SG CYS 25 A CYS 25 1_555 B C21 INA . A INA 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.799 ? # _chem_comp.formula 'C29 H40 N6 O7' _chem_comp.formula_weight 584.664 _chem_comp.id INA _chem_comp.mon_nstd_flag . _chem_comp.name 1,5-BIS(N-BENZYLOXYCARBONYL-L-LEUCINYL)CARBOHYDRAZIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 INA doub 173 n y C1 C6 INA sing 174 n y C1 H1 INA sing 175 n n C2 C3 INA sing 176 n y C2 H2 INA sing 177 n n C3 C4 INA doub 178 n y C3 H3 INA sing 179 n n C4 C5 INA sing 180 n y C4 C7 INA sing 181 n n C5 C6 INA doub 182 n y C5 H5 INA sing 183 n n C6 H6 INA sing 184 n n C7 O8 INA sing 185 n n C7 H71 INA sing 186 n n C7 H72 INA sing 187 n n O8 C9 INA sing 188 n n C9 O10 INA doub 189 n n C9 N20 INA sing 190 n n C11 C12 INA sing 191 n n C11 C16 INA sing 192 n n C11 N20 INA sing 193 n n C11 H11 INA sing 194 n n C12 C13 INA sing 195 n n C12 H121 INA sing 196 n n C12 H122 INA sing 197 n n C13 C14 INA sing 198 n n C13 C15 INA sing 199 n n C13 H13 INA sing 200 n n C14 H141 INA sing 201 n n C14 H142 INA sing 202 n n C14 H143 INA sing 203 n n C15 H151 INA sing 204 n n C15 H152 INA sing 205 n n C15 H153 INA sing 206 n n C16 O17 INA doub 207 n n C16 N18 INA sing 208 n n N18 N19 INA sing 209 n n N18 HN8 INA sing 210 n n N19 C21 INA sing 211 n n N19 HN9 INA sing 212 n n N20 HN0 INA sing 213 n n C21 O22 INA doub 214 n n C21 N41 INA sing 215 n n C23 C24 INA doub 216 n y C23 C28 INA sing 217 n y C23 H23 INA sing 218 n n C24 C25 INA sing 219 n y C24 H24 INA sing 220 n n C25 C26 INA doub 221 n y C25 H25 INA sing 222 n n C26 C27 INA sing 223 n y C26 C29 INA sing 224 n n C27 C28 INA doub 225 n y C27 H27 INA sing 226 n n C28 H28 INA sing 227 n n C29 O30 INA sing 228 n n C29 H291 INA sing 229 n n C29 H292 INA sing 230 n n O30 C31 INA sing 231 n n C31 O32 INA doub 232 n n C31 N42 INA sing 233 n n C33 C34 INA sing 234 n n C33 C38 INA sing 235 n n C33 N42 INA sing 236 n n C33 H33 INA sing 237 n n C34 C35 INA sing 238 n n C34 H341 INA sing 239 n n C34 H342 INA sing 240 n n C35 C36 INA sing 241 n n C35 C37 INA sing 242 n n C35 H35 INA sing 243 n n C36 H361 INA sing 244 n n C36 H362 INA sing 245 n n C36 H363 INA sing 246 n n C37 H371 INA sing 247 n n C37 H372 INA sing 248 n n C37 H373 INA sing 249 n n C38 O39 INA doub 250 n n C38 N40 INA sing 251 n n N40 N41 INA sing 252 n n N40 HN4 INA sing 253 n n N41 HN1 INA sing 254 n n N42 HN2 INA sing 255 n n # _atom_sites.entry_id 1AYU _atom_sites.fract_transf_matrix[1][1] 0.026089 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019493 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009628 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 INA A 1 300 300 INA INA . C 3 HOH A 1 301 301 HOH HOH . C 3 HOH A 2 302 302 HOH HOH . C 3 HOH A 3 303 303 HOH HOH . C 3 HOH A 4 304 304 HOH HOH . C 3 HOH A 5 305 305 HOH HOH . C 3 HOH A 6 306 306 HOH HOH . C 3 HOH A 7 307 307 HOH HOH . C 3 HOH A 8 308 308 HOH HOH . C 3 HOH A 9 309 309 HOH HOH . C 3 HOH A 10 310 310 HOH HOH . C 3 HOH A 11 311 311 HOH HOH . C 3 HOH A 12 312 312 HOH HOH . C 3 HOH A 13 313 313 HOH HOH . C 3 HOH A 14 314 314 HOH HOH . C 3 HOH A 15 315 315 HOH HOH . C 3 HOH A 16 316 316 HOH HOH . C 3 HOH A 17 317 317 HOH HOH . C 3 HOH A 18 318 318 HOH HOH . C 3 HOH A 19 319 319 HOH HOH . C 3 HOH A 20 320 320 HOH HOH . C 3 HOH A 21 321 321 HOH HOH . C 3 HOH A 22 322 322 HOH HOH . C 3 HOH A 23 323 323 HOH HOH . C 3 HOH A 24 324 324 HOH HOH . C 3 HOH A 25 325 325 HOH HOH . C 3 HOH A 26 326 326 HOH HOH . C 3 HOH A 27 327 327 HOH HOH . C 3 HOH A 28 328 328 HOH HOH . C 3 HOH A 29 329 329 HOH HOH . C 3 HOH A 30 330 330 HOH HOH . C 3 HOH A 31 331 331 HOH HOH . C 3 HOH A 32 332 332 HOH HOH . C 3 HOH A 33 333 333 HOH HOH . C 3 HOH A 34 334 334 HOH HOH . C 3 HOH A 35 335 335 HOH HOH . C 3 HOH A 36 336 336 HOH HOH . C 3 HOH A 37 337 337 HOH HOH . C 3 HOH A 38 338 338 HOH HOH . C 3 HOH A 39 339 339 HOH HOH . C 3 HOH A 40 340 340 HOH HOH . C 3 HOH A 41 341 341 HOH HOH . C 3 HOH A 42 342 342 HOH HOH . C 3 HOH A 43 343 343 HOH HOH . C 3 HOH A 44 344 344 HOH HOH . C 3 HOH A 45 345 345 HOH HOH . C 3 HOH A 46 346 346 HOH HOH . C 3 HOH A 47 347 347 HOH HOH . C 3 HOH A 48 348 348 HOH HOH . C 3 HOH A 49 349 349 HOH HOH . C 3 HOH A 50 350 350 HOH HOH . C 3 HOH A 51 351 351 HOH HOH . C 3 HOH A 52 352 352 HOH HOH . C 3 HOH A 53 353 353 HOH HOH . C 3 HOH A 54 354 354 HOH HOH . C 3 HOH A 55 355 355 HOH HOH . C 3 HOH A 56 356 356 HOH HOH . C 3 HOH A 57 357 357 HOH HOH . C 3 HOH A 58 358 358 HOH HOH . C 3 HOH A 59 359 359 HOH HOH . C 3 HOH A 60 360 360 HOH HOH . C 3 HOH A 61 361 361 HOH HOH . C 3 HOH A 62 362 362 HOH HOH . C 3 HOH A 63 363 363 HOH HOH . C 3 HOH A 64 364 364 HOH HOH . C 3 HOH A 65 365 365 HOH HOH . C 3 HOH A 66 366 366 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 INA . . . B 2 -28.282 -9.31 55.936 1 15 ? C1 INA 300 A 1 HETATM 2 C C2 INA . . . B 2 -28.07 -9.033 57.305 1 15 ? C2 INA 300 A 1 HETATM 3 C C3 INA . . . B 2 -27.111 -9.775 58.032 1 15 ? C3 INA 300 A 1 HETATM 4 C C4 INA . . . B 2 -26.368 -10.782 57.404 1 15 ? C4 INA 300 A 1 HETATM 5 C C5 INA . . . B 2 -26.594 -11.048 56.046 1 15 ? C5 INA 300 A 1 HETATM 6 C C6 INA . . . B 2 -27.542 -10.321 55.31 1 15 ? C6 INA 300 A 1 HETATM 7 C C7 INA . . . B 2 -25.312 -11.537 58.158 1 15 ? C7 INA 300 A 1 HETATM 8 O O8 INA . . . B 2 -24.191 -11.68 57.239 1 15 ? O8 INA 300 A 1 HETATM 9 C C9 INA . . . B 2 -23.288 -12.79 57.2 1 15 ? C9 INA 300 A 1 HETATM 10 O O10 INA . . . B 2 -22.497 -12.994 58.133 1 15 ? O10 INA 300 A 1 HETATM 11 C C11 INA . . . B 2 -22.453 -14.708 55.877 1 15 ? C11 INA 300 A 1 HETATM 12 C C12 INA . . . B 2 -21.047 -14.473 56.477 1 15 ? C12 INA 300 A 1 HETATM 13 C C13 INA . . . B 2 -20.107 -13.384 55.921 1 15 ? C13 INA 300 A 1 HETATM 14 C C14 INA . . . B 2 -19.146 -12.915 57.006 1 15 ? C14 INA 300 A 1 HETATM 15 C C15 INA . . . B 2 -20.827 -12.173 55.229 1 15 ? C15 INA 300 A 1 HETATM 16 C C16 INA . . . B 2 -23.003 -16.056 56.345 1 15 ? C16 INA 300 A 1 HETATM 17 O O17 INA . . . B 2 -24.158 -16.147 56.754 1 15 ? O17 INA 300 A 1 HETATM 18 N N18 INA . . . B 2 -22.192 -17.174 56.304 1 15 ? N18 INA 300 A 1 HETATM 19 N N19 INA . . . B 2 -22.624 -18.534 56.742 1 15 ? N19 INA 300 A 1 HETATM 20 N N20 INA . . . B 2 -23.336 -13.552 56.102 1 15 ? N20 INA 300 A 1 HETATM 21 C C21 INA . . . B 2 -22.089 -18.852 58.136 1 15 ? C21 INA 300 A 1 HETATM 22 O O22 INA . . . B 2 -22.102 -17.804 58.75 1 15 ? O22 INA 300 A 1 HETATM 23 C C23 INA . . . B 2 -12.778 -27.305 59.765 1 15 ? C23 INA 300 A 1 HETATM 24 C C24 INA . . . B 2 -13.75 -26.799 60.623 1 15 ? C24 INA 300 A 1 HETATM 25 C C25 INA . . . B 2 -14.614 -25.791 60.172 1 15 ? C25 INA 300 A 1 HETATM 26 C C26 INA . . . B 2 -14.516 -25.287 58.879 1 15 ? C26 INA 300 A 1 HETATM 27 C C27 INA . . . B 2 -13.536 -25.805 58.031 1 15 ? C27 INA 300 A 1 HETATM 28 C C28 INA . . . B 2 -12.667 -26.809 58.471 1 15 ? C28 INA 300 A 1 HETATM 29 C C29 INA . . . B 2 -15.452 -24.211 58.4 1 15 ? C29 INA 300 A 1 HETATM 30 O O30 INA . . . B 2 -16.523 -24.58 57.487 1 15 ? O30 INA 300 A 1 HETATM 31 C C31 INA . . . B 2 -17.558 -23.663 57.052 1 15 ? C31 INA 300 A 1 HETATM 32 O O32 INA . . . B 2 -17.32 -22.741 56.267 1 15 ? O32 INA 300 A 1 HETATM 33 C C33 INA . . . B 2 -19.948 -23.086 57.184 1 15 ? C33 INA 300 A 1 HETATM 34 C C34 INA . . . B 2 -21.231 -23.902 57.348 1 15 ? C34 INA 300 A 1 HETATM 35 C C35 INA . . . B 2 -21.105 -25.252 58.035 1 15 ? C35 INA 300 A 1 HETATM 36 C C36 INA . . . B 2 -22.315 -25.592 58.888 1 15 ? C36 INA 300 A 1 HETATM 37 C C37 INA . . . B 2 -20.84 -26.311 56.988 1 15 ? C37 INA 300 A 1 HETATM 38 C C38 INA . . . B 2 -20.066 -21.831 58.03 1 15 ? C38 INA 300 A 1 HETATM 39 O O39 INA . . . B 2 -19.736 -21.858 59.216 1 15 ? O39 INA 300 A 1 HETATM 40 N N40 INA . . . B 2 -20.558 -20.703 57.43 1 15 ? N40 INA 300 A 1 HETATM 41 N N41 INA . . . B 2 -20.704 -19.436 58.209 1 15 ? N41 INA 300 A 1 HETATM 42 N N42 INA . . . B 2 -18.779 -23.896 57.541 1 15 ? N42 INA 300 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 42 #