data_1AYV # _model_server_result.job_id hOEAPOqldH-GWz0asueIzg _model_server_result.datetime_utc '2024-10-11 01:29:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ayv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":300}' # _entry.id 1AYV # _exptl.entry_id 1AYV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 609.736 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N-[2-[1-(N-BENZYLOXYCARBONYLAMINO)-3-METHYLBUTYL]THIAZOL-4-YLCARBONYL]-N'-(BENZYLOXYCARBONYL-L-LEUCINYL)HYDRAZIDE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1AYV _cell.length_a 38.31 _cell.length_b 51.27 _cell.length_c 103.87 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AYV _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 63 A CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf2 A SG CYS 56 A CYS 56 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 A SG CYS 155 A CYS 155 1_555 A SG CYS 204 A CYS 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? covale ? covale1 A SG CYS 25 A CYS 25 1_555 B C21 IN6 . A IN6 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.806 ? # _chem_comp.formula 'C31 H39 N5 O6 S' _chem_comp.formula_weight 609.736 _chem_comp.id IN6 _chem_comp.mon_nstd_flag . _chem_comp.name "N-[2-[1-(N-BENZYLOXYCARBONYLAMINO)-3-METHYLBUTYL]THIAZOL-4-YLCARBONYL]-N'-(BENZYLOXYCARBONYL-L-LEUCINYL)HYDRAZIDE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1AYV _atom_sites.fract_transf_matrix[1][1] 0.026103 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019505 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009627 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IN6 A 1 300 300 IN6 IN6 . C 3 HOH A 1 301 301 HOH HOH . C 3 HOH A 2 302 302 HOH HOH . C 3 HOH A 3 303 303 HOH HOH . C 3 HOH A 4 304 304 HOH HOH . C 3 HOH A 5 305 305 HOH HOH . C 3 HOH A 6 306 306 HOH HOH . C 3 HOH A 7 307 307 HOH HOH . C 3 HOH A 8 308 308 HOH HOH . C 3 HOH A 9 309 309 HOH HOH . C 3 HOH A 10 310 310 HOH HOH . C 3 HOH A 11 311 311 HOH HOH . C 3 HOH A 12 312 312 HOH HOH . C 3 HOH A 13 313 313 HOH HOH . C 3 HOH A 14 314 314 HOH HOH . C 3 HOH A 15 315 315 HOH HOH . C 3 HOH A 16 316 316 HOH HOH . C 3 HOH A 17 317 317 HOH HOH . C 3 HOH A 18 318 318 HOH HOH . C 3 HOH A 19 319 319 HOH HOH . C 3 HOH A 20 320 320 HOH HOH . C 3 HOH A 21 321 321 HOH HOH . C 3 HOH A 22 322 322 HOH HOH . C 3 HOH A 23 323 323 HOH HOH . C 3 HOH A 24 324 324 HOH HOH . C 3 HOH A 25 325 325 HOH HOH . C 3 HOH A 26 326 326 HOH HOH . C 3 HOH A 27 327 327 HOH HOH . C 3 HOH A 28 328 328 HOH HOH . C 3 HOH A 29 329 329 HOH HOH . C 3 HOH A 30 330 330 HOH HOH . C 3 HOH A 31 331 331 HOH HOH . C 3 HOH A 32 332 332 HOH HOH . C 3 HOH A 33 333 333 HOH HOH . C 3 HOH A 34 334 334 HOH HOH . C 3 HOH A 35 335 335 HOH HOH . C 3 HOH A 36 336 336 HOH HOH . C 3 HOH A 37 337 337 HOH HOH . C 3 HOH A 38 338 338 HOH HOH . C 3 HOH A 39 339 339 HOH HOH . C 3 HOH A 40 340 340 HOH HOH . C 3 HOH A 41 341 341 HOH HOH . C 3 HOH A 42 342 342 HOH HOH . C 3 HOH A 43 343 343 HOH HOH . C 3 HOH A 44 344 344 HOH HOH . C 3 HOH A 45 345 345 HOH HOH . C 3 HOH A 46 346 346 HOH HOH . C 3 HOH A 47 347 347 HOH HOH . C 3 HOH A 48 348 348 HOH HOH . C 3 HOH A 49 349 349 HOH HOH . C 3 HOH A 50 350 350 HOH HOH . C 3 HOH A 51 351 351 HOH HOH . C 3 HOH A 52 352 352 HOH HOH . C 3 HOH A 53 353 353 HOH HOH . C 3 HOH A 54 354 354 HOH HOH . C 3 HOH A 55 355 355 HOH HOH . C 3 HOH A 56 356 356 HOH HOH . C 3 HOH A 57 357 357 HOH HOH . C 3 HOH A 58 358 358 HOH HOH . C 3 HOH A 59 359 359 HOH HOH . C 3 HOH A 60 360 360 HOH HOH . C 3 HOH A 61 361 361 HOH HOH . C 3 HOH A 62 362 362 HOH HOH . C 3 HOH A 63 363 363 HOH HOH . C 3 HOH A 64 364 364 HOH HOH . C 3 HOH A 65 365 365 HOH HOH . C 3 HOH A 66 366 366 HOH HOH . C 3 HOH A 67 367 367 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IN6 . . . B 2 -28.495 -9.523 55.701 1 15 ? C1 IN6 300 A 1 HETATM 2 C C2 IN6 . . . B 2 -28.629 -9.334 57.084 1 15 ? C2 IN6 300 A 1 HETATM 3 C C3 IN6 . . . B 2 -27.556 -9.627 57.939 1 15 ? C3 IN6 300 A 1 HETATM 4 C C4 IN6 . . . B 2 -26.351 -10.105 57.43 1 15 ? C4 IN6 300 A 1 HETATM 5 C C5 IN6 . . . B 2 -26.228 -10.288 56.052 1 15 ? C5 IN6 300 A 1 HETATM 6 C C6 IN6 . . . B 2 -27.29 -10.001 55.185 1 15 ? C6 IN6 300 A 1 HETATM 7 C C7 IN6 . . . B 2 -25.2 -10.405 58.348 1 15 ? C7 IN6 300 A 1 HETATM 8 O O8 IN6 . . . B 2 -24.727 -11.765 58.361 1 15 ? O8 IN6 300 A 1 HETATM 9 C C9 IN6 . . . B 2 -24.031 -12.42 57.297 1 15 ? C9 IN6 300 A 1 HETATM 10 O O10 IN6 . . . B 2 -24.33 -12.231 56.098 1 15 ? O10 IN6 300 A 1 HETATM 11 C C11 IN6 . . . B 2 -22.266 -14.013 56.705 1 15 ? C11 IN6 300 A 1 HETATM 12 C C12 IN6 . . . B 2 -20.775 -13.625 56.802 1 15 ? C12 IN6 300 A 1 HETATM 13 C C14 IN6 . . . B 2 -20.177 -12.602 55.816 1 15 ? C14 IN6 300 A 1 HETATM 14 C C15 IN6 . . . B 2 -19.006 -11.829 56.472 1 15 ? C15 IN6 300 A 1 HETATM 15 C C16 IN6 . . . B 2 -21.222 -11.635 55.226 1 15 ? C16 IN6 300 A 1 HETATM 16 C C17 IN6 . . . B 2 -22.498 -15.59 56.8 1 15 ? C17 IN6 300 A 1 HETATM 17 S S18 IN6 . . . B 2 -23.784 -16.315 55.923 1 15 ? S18 IN6 300 A 1 HETATM 18 N N19 IN6 . . . B 2 -21.796 -16.549 57.498 1 15 ? N19 IN6 300 A 1 HETATM 19 C C20 IN6 . . . B 2 -22.208 -17.872 57.393 1 15 ? C20 IN6 300 A 1 HETATM 20 N N24 IN6 . . . B 2 -23.054 -13.25 57.681 1 15 ? N24 IN6 300 A 1 HETATM 21 C C42 IN6 . . . B 2 -23.274 -17.877 56.551 1 15 ? C42 IN6 300 A 1 HETATM 22 C C21 IN6 . . . B 2 -21.576 -19.104 58.242 1 15 ? C21 IN6 300 A 1 HETATM 23 O O22 IN6 . . . B 2 -21.372 -18.386 59.169 1 15 ? O22 IN6 300 A 1 HETATM 24 C C1' IN6 . . . B 2 -13.785 -23.508 54.959 1 15 ? C1' IN6 300 A 1 HETATM 25 C C2' IN6 . . . B 2 -14.232 -22.838 56.077 1 15 ? C2' IN6 300 A 1 HETATM 26 C C3' IN6 . . . B 2 -14.833 -23.544 57.118 1 15 ? C3' IN6 300 A 1 HETATM 27 C C4' IN6 . . . B 2 -14.998 -24.929 57.042 1 15 ? C4' IN6 300 A 1 HETATM 28 C C5' IN6 . . . B 2 -14.535 -25.604 55.908 1 15 ? C5' IN6 300 A 1 HETATM 29 C C6' IN6 . . . B 2 -13.935 -24.901 54.866 1 15 ? C6' IN6 300 A 1 HETATM 30 C C7' IN6 . . . B 2 -15.723 -25.671 58.137 1 15 ? C7' IN6 300 A 1 HETATM 31 O O8' IN6 . . . B 2 -17.102 -25.93 57.709 1 15 ? O8' IN6 300 A 1 HETATM 32 C C9' IN6 . . . B 2 -17.91 -25.028 56.962 1 15 ? C9' IN6 300 A 1 HETATM 33 O OA' IN6 . . . B 2 -17.69 -24.81 55.772 1 15 ? OA' IN6 300 A 1 HETATM 34 C CB' IN6 . . . B 2 -19.822 -23.492 57 1 15 ? CB' IN6 300 A 1 HETATM 35 C CC' IN6 . . . B 2 -21.217 -24.118 56.838 1 15 ? CC' IN6 300 A 1 HETATM 36 C CE' IN6 . . . B 2 -21.919 -24.887 57.968 1 15 ? CE' IN6 300 A 1 HETATM 37 C CF' IN6 . . . B 2 -21.435 -26.307 58.121 1 15 ? CF' IN6 300 A 1 HETATM 38 C CG' IN6 . . . B 2 -21.865 -24.153 59.287 1 15 ? CG' IN6 300 A 1 HETATM 39 C CH' IN6 . . . B 2 -19.867 -22.149 57.76 1 15 ? CH' IN6 300 A 1 HETATM 40 O OI' IN6 . . . B 2 -19.604 -22.125 58.962 1 15 ? OI' IN6 300 A 1 HETATM 41 N NJ' IN6 . . . B 2 -20.182 -20.996 57.082 1 15 ? NJ' IN6 300 A 1 HETATM 42 N NK' IN6 . . . B 2 -20.198 -19.648 57.78 1 15 ? NK' IN6 300 A 1 HETATM 43 N NO' IN6 . . . B 2 -18.904 -24.443 57.633 1 15 ? NO' IN6 300 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 43 #