data_1AZ8 # _model_server_result.job_id klN5DeEBsUh-4blD_lvJuA _model_server_result.datetime_utc '2025-04-26 12:25:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1az8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 1AZ8 # _exptl.entry_id 1AZ8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 352.43 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '+/-METHYL 4-(AMINOIMINOMETHYL)-BETA-[3- INH (AMINOIMINO)PHENYL]BENZENE PENTANOATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1AZ8 _cell.length_a 54.8 _cell.length_b 58.7 _cell.length_c 67.5 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1AZ8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 137 A CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? disulf ? disulf2 A SG CYS 25 A CYS 42 1_555 A SG CYS 41 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? disulf ? disulf3 A SG CYS 109 A CYS 128 1_555 A SG CYS 210 A CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? disulf ? disulf4 A SG CYS 116 A CYS 136 1_555 A SG CYS 183 A CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? disulf ? disulf5 A SG CYS 148 A CYS 168 1_555 A SG CYS 162 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? disulf ? disulf6 A SG CYS 173 A CYS 191 1_555 A SG CYS 197 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? # _chem_comp.formula 'C20 H24 N4 O2' _chem_comp.formula_weight 352.43 _chem_comp.id IN4 _chem_comp.mon_nstd_flag . _chem_comp.name '+/-METHYL 4-(AMINOIMINOMETHYL)-BETA-[3- INH (AMINOIMINO)PHENYL]BENZENE PENTANOATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IN4 doub 173 n y C1 C6 IN4 sing 174 n y C1 H1 IN4 sing 175 n n C2 C3 IN4 sing 176 n y C2 H2 IN4 sing 177 n n C3 C4 IN4 doub 178 n y C3 H3 IN4 sing 179 n n C4 C5 IN4 sing 180 n y C4 C10 IN4 sing 181 n n C5 C6 IN4 doub 182 n y C5 H5 IN4 sing 183 n n C6 C20 IN4 sing 184 n n C10 C9 IN4 sing 185 n n C10 C14 IN4 sing 186 n n C10 H10 IN4 sing 187 n n C9 C11 IN4 sing 188 n n C9 H91 IN4 sing 189 n n C9 H92 IN4 sing 190 n n C11 C12 IN4 sing 191 n n C11 H111 IN4 sing 192 n n C11 H112 IN4 sing 193 n n C12 C7 IN4 doub 194 n y C12 C19 IN4 sing 195 n y C20 N3 IN4 doub 196 e n C20 N4 IN4 sing 197 n n N3 HN3 IN4 sing 198 n n N4 HN41 IN4 sing 199 n n N4 HN42 IN4 sing 200 n n C7 C13 IN4 sing 201 n y C7 H7 IN4 sing 202 n n C13 C15 IN4 doub 203 n y C13 H13 IN4 sing 204 n n C15 C16 IN4 sing 205 n n C15 C17 IN4 sing 206 n y C16 N2 IN4 doub 207 n n C16 N1 IN4 sing 208 n n C17 C19 IN4 doub 209 n y C17 H17 IN4 sing 210 n n C19 H19 IN4 sing 211 n n N2 HN2 IN4 sing 212 n n N1 HN11 IN4 sing 213 n n N1 HN12 IN4 sing 214 n n C14 C22 IN4 sing 215 n n C14 H141 IN4 sing 216 n n C14 H142 IN4 sing 217 n n C22 O3 IN4 doub 218 n n C22 O4 IN4 sing 219 n n O4 C8 IN4 sing 220 n n C8 H81 IN4 sing 221 n n C8 H82 IN4 sing 222 n n C8 H83 IN4 sing 223 n n # _atom_sites.entry_id 1AZ8 _atom_sites.fract_transf_matrix[1][1] 0.018248 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017036 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014815 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IN4 A 1 1 1 IN4 IN4 . C 3 HOH A 1 601 601 HOH HOH . C 3 HOH A 2 602 602 HOH HOH . C 3 HOH A 3 603 603 HOH HOH . C 3 HOH A 4 604 604 HOH HOH . C 3 HOH A 5 605 605 HOH HOH . C 3 HOH A 6 606 606 HOH HOH . C 3 HOH A 7 607 607 HOH HOH . C 3 HOH A 8 608 608 HOH HOH . C 3 HOH A 9 609 609 HOH HOH . C 3 HOH A 10 610 610 HOH HOH . C 3 HOH A 11 611 611 HOH HOH . C 3 HOH A 12 612 612 HOH HOH . C 3 HOH A 13 613 613 HOH HOH . C 3 HOH A 14 614 614 HOH HOH . C 3 HOH A 15 615 615 HOH HOH . C 3 HOH A 16 616 616 HOH HOH . C 3 HOH A 17 617 617 HOH HOH . C 3 HOH A 18 618 618 HOH HOH . C 3 HOH A 19 619 619 HOH HOH . C 3 HOH A 20 620 620 HOH HOH . C 3 HOH A 21 621 621 HOH HOH . C 3 HOH A 22 622 622 HOH HOH . C 3 HOH A 23 623 623 HOH HOH . C 3 HOH A 24 624 624 HOH HOH . C 3 HOH A 25 625 625 HOH HOH . C 3 HOH A 26 626 626 HOH HOH . C 3 HOH A 27 627 627 HOH HOH . C 3 HOH A 28 628 628 HOH HOH . C 3 HOH A 29 629 629 HOH HOH . C 3 HOH A 30 630 630 HOH HOH . C 3 HOH A 31 631 631 HOH HOH . C 3 HOH A 32 632 632 HOH HOH . C 3 HOH A 33 633 633 HOH HOH . C 3 HOH A 34 634 634 HOH HOH . C 3 HOH A 35 635 635 HOH HOH . C 3 HOH A 36 636 636 HOH HOH . C 3 HOH A 37 637 637 HOH HOH . C 3 HOH A 38 638 638 HOH HOH . C 3 HOH A 39 639 639 HOH HOH . C 3 HOH A 40 640 640 HOH HOH . C 3 HOH A 41 641 641 HOH HOH . C 3 HOH A 42 642 642 HOH HOH . C 3 HOH A 43 643 643 HOH HOH . C 3 HOH A 44 644 644 HOH HOH . C 3 HOH A 45 645 645 HOH HOH . C 3 HOH A 46 646 646 HOH HOH . C 3 HOH A 47 647 647 HOH HOH . C 3 HOH A 48 648 648 HOH HOH . C 3 HOH A 49 649 649 HOH HOH . C 3 HOH A 50 650 650 HOH HOH . C 3 HOH A 51 651 651 HOH HOH . C 3 HOH A 52 652 652 HOH HOH . C 3 HOH A 53 653 653 HOH HOH . C 3 HOH A 54 654 654 HOH HOH . C 3 HOH A 55 655 655 HOH HOH . C 3 HOH A 56 656 656 HOH HOH . C 3 HOH A 57 657 657 HOH HOH . C 3 HOH A 58 658 658 HOH HOH . C 3 HOH A 59 659 659 HOH HOH . C 3 HOH A 60 660 660 HOH HOH . C 3 HOH A 61 661 661 HOH HOH . C 3 HOH A 62 662 662 HOH HOH . C 3 HOH A 63 663 663 HOH HOH . C 3 HOH A 64 664 664 HOH HOH . C 3 HOH A 65 665 665 HOH HOH . C 3 HOH A 66 666 666 HOH HOH . C 3 HOH A 67 667 667 HOH HOH . C 3 HOH A 68 668 668 HOH HOH . C 3 HOH A 69 669 669 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IN4 . . . B 2 28.716 15.623 17.659 1 16.42 ? C1 IN4 1 A 1 HETATM 2 C C2 IN4 . . . B 2 28.506 14.923 18.841 1 18.48 ? C2 IN4 1 A 1 HETATM 3 C C3 IN4 . . . B 2 28.782 13.556 18.873 1 18.89 ? C3 IN4 1 A 1 HETATM 4 C C4 IN4 . . . B 2 29.267 12.908 17.721 1 21.94 ? C4 IN4 1 A 1 HETATM 5 C C5 IN4 . . . B 2 29.508 13.625 16.566 1 17.3 ? C5 IN4 1 A 1 HETATM 6 C C6 IN4 . . . B 2 29.241 14.976 16.536 1 17.2 ? C6 IN4 1 A 1 HETATM 7 C C10 IN4 . . . B 2 29.585 11.486 17.648 1 26.82 ? C10 IN4 1 A 1 HETATM 8 C C9 IN4 . . . B 2 31.069 11.356 17.931 1 28.6 ? C9 IN4 1 A 1 HETATM 9 C C11 IN4 . . . B 2 31.62 9.964 17.705 1 31.95 ? C11 IN4 1 A 1 HETATM 10 C C12 IN4 . . . B 2 33.126 10.033 17.815 1 34.09 ? C12 IN4 1 A 1 HETATM 11 C C20 IN4 . . . B 2 29.489 15.728 15.271 1 16.24 ? C20 IN4 1 A 1 HETATM 12 N N3 IN4 . . . B 2 30.011 15.183 14.197 1 16.67 ? N3 IN4 1 A 1 HETATM 13 N N4 IN4 . . . B 2 29.131 16.979 15.223 1 18.28 ? N4 IN4 1 A 1 HETATM 14 C C7 IN4 . . . B 2 33.852 10.479 16.716 1 34.64 ? C7 IN4 1 A 1 HETATM 15 C C13 IN4 . . . B 2 35.24 10.605 16.812 1 37.07 ? C13 IN4 1 A 1 HETATM 16 C C15 IN4 . . . B 2 35.933 10.228 17.98 1 37.86 ? C15 IN4 1 A 1 HETATM 17 C C16 IN4 . . . B 2 37.455 10.315 18.01 1 38.03 ? C16 IN4 1 A 1 HETATM 18 C C17 IN4 . . . B 2 35.194 9.749 19.075 1 35.11 ? C17 IN4 1 A 1 HETATM 19 C C19 IN4 . . . B 2 33.8 9.677 18.996 1 34.2 ? C19 IN4 1 A 1 HETATM 20 N N2 IN4 . . . B 2 38.121 9.896 19.069 1 38.28 ? N2 IN4 1 A 1 HETATM 21 N N1 IN4 . . . B 2 38.161 10.792 16.982 1 38.92 ? N1 IN4 1 A 1 HETATM 22 C C14 IN4 . . . B 2 28.702 10.577 18.537 1 32.09 ? C14 IN4 1 A 1 HETATM 23 C C22 IN4 . . . B 2 27.18 10.796 18.452 1 35.07 ? C22 IN4 1 A 1 HETATM 24 O O3 IN4 . . . B 2 26.635 10.96 17.36 1 37.55 ? O3 IN4 1 A 1 HETATM 25 O O4 IN4 . . . B 2 26.455 10.749 19.624 1 35.7 ? O4 IN4 1 A 1 HETATM 26 C C8 IN4 . . . B 2 25.04 10.869 19.726 1 33.88 ? C8 IN4 1 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #